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Protein

40S ribosomal protein S5

Gene

Rps5

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S5
Cleaved into the following chain:
Gene namesi
Name:Rps5
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Unplaced

Organism-specific databases

RGDi3601. Rps5.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 20420440S ribosomal protein S5PRO_0000370371Add
BLAST
Initiator methionineiRemoved; alternateBy similarity
Chaini2 – 20420340S ribosomal protein S5, N-terminally processedPRO_0000124528Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei1 – 11N-acetylmethionineBy similarity
Modified residuei2 – 21N-acetylthreonine; in 40S ribosomal protein S5, N-terminally processedBy similarity
Modified residuei14 – 141PhosphothreonineBy similarity
Modified residuei47 – 471N6-acetyllysineBy similarity
Modified residuei142 – 1421PhosphoserineBy similarity

Keywords - PTMi

Acetylation, Phosphoprotein

Proteomic databases

PaxDbiP24050.
PRIDEiP24050.

PTM databases

iPTMnetiP24050.
PhosphoSiteiP24050.

Interactioni

Protein-protein interaction databases

IntActiP24050. 2 interactions.
MINTiMINT-4571839.
STRINGi10116.ENSRNOP00000026528.

Structurei

3D structure databases

ProteinModelPortaliP24050.
SMRiP24050. Positions 17-204.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S7P family.Curated

Phylogenomic databases

eggNOGiKOG3291. Eukaryota.
COG0049. LUCA.
HOGENOMiHOG000039066.
HOVERGENiHBG028547.
InParanoidiP24050.
PhylomeDBiP24050.

Family and domain databases

CDDicd14867. uS7_Eukaryote. 1 hit.
Gene3Di1.10.455.10. 1 hit.
InterProiIPR000235. Ribosomal_S5/S7.
IPR005716. Ribosomal_S5/S7_euk/arc.
IPR020606. Ribosomal_S7_CS.
IPR023798. Ribosomal_S7_dom.
[Graphical view]
PANTHERiPTHR11205. PTHR11205. 1 hit.
PfamiPF00177. Ribosomal_S7. 1 hit.
[Graphical view]
PIRSFiPIRSF002122. RPS7p_RPS7a_RPS5e_RPS7o. 1 hit.
SUPFAMiSSF47973. SSF47973. 1 hit.
TIGRFAMsiTIGR01028. uS7_euk_arch. 1 hit.
PROSITEiPS00052. RIBOSOMAL_S7. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P24050-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTEWETATPA VAETPDIKLF GKWSTDDVQI NDISLQDYIA VKEKYAKYLP
60 70 80 90 100
HSAGRYAANG FRKAQCPIVE RLTNSMMMHG RNNGKKLMTV RIVKHAFEII
110 120 130 140 150
HLLTGENPLQ VLVNAIINSG PREDSTRIGR AGTVRRQAVD VSPLRRVNQA
160 170 180 190 200
IWLLCTGARE AAFRNIKTIA ECLADELINA RKGSSNSYAI KKKDELERVA

KSNR
Length:204
Mass (Da):22,878
Last modified:January 23, 2007 - v3
Checksum:i7E6744A8A412BFED
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X58465 mRNA. Translation: CAA41379.1.
PIRiA45059. R3RT5.
UniGeneiRn.203028.

Genome annotation databases

UCSCiRGD:3601. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X58465 mRNA. Translation: CAA41379.1.
PIRiA45059. R3RT5.
UniGeneiRn.203028.

3D structure databases

ProteinModelPortaliP24050.
SMRiP24050. Positions 17-204.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiP24050. 2 interactions.
MINTiMINT-4571839.
STRINGi10116.ENSRNOP00000026528.

PTM databases

iPTMnetiP24050.
PhosphoSiteiP24050.

Proteomic databases

PaxDbiP24050.
PRIDEiP24050.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

UCSCiRGD:3601. rat.

Organism-specific databases

RGDi3601. Rps5.

Phylogenomic databases

eggNOGiKOG3291. Eukaryota.
COG0049. LUCA.
HOGENOMiHOG000039066.
HOVERGENiHBG028547.
InParanoidiP24050.
PhylomeDBiP24050.

Miscellaneous databases

PROiP24050.

Family and domain databases

CDDicd14867. uS7_Eukaryote. 1 hit.
Gene3Di1.10.455.10. 1 hit.
InterProiIPR000235. Ribosomal_S5/S7.
IPR005716. Ribosomal_S5/S7_euk/arc.
IPR020606. Ribosomal_S7_CS.
IPR023798. Ribosomal_S7_dom.
[Graphical view]
PANTHERiPTHR11205. PTHR11205. 1 hit.
PfamiPF00177. Ribosomal_S7. 1 hit.
[Graphical view]
PIRSFiPIRSF002122. RPS7p_RPS7a_RPS5e_RPS7o. 1 hit.
SUPFAMiSSF47973. SSF47973. 1 hit.
TIGRFAMsiTIGR01028. uS7_euk_arch. 1 hit.
PROSITEiPS00052. RIBOSOMAL_S7. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRS5_RAT
AccessioniPrimary (citable) accession number: P24050
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 1, 1992
Last sequence update: January 23, 2007
Last modified: September 7, 2016
This is version 114 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.