Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

60S ribosomal protein L17

Gene

Rpl17

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  • large ribosomal subunit rRNA binding Source: RGD
  • structural constituent of ribosome Source: InterPro

GO - Biological processi

  • cellular response to amino acid starvation Source: RGD
  • positive regulation of G1/S transition of mitotic cell cycle Source: RGD
  • response to amino acid starvation Source: RGD
  • translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L17
Alternative name(s):
Amino acid starvation-induced protein
Short name:
ASI
L23
Gene namesi
Name:Rpl17
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Unplaced

Organism-specific databases

RGDi1303019. Rpl17.

Subcellular locationi

GO - Cellular componenti

  • A band Source: RGD
  • cytosolic large ribosomal subunit Source: RGD
  • nucleus Source: RGD
  • polysome Source: RGD
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methionineiRemovedBy similarity
Chaini2 – 18418360S ribosomal protein L17PRO_0000125334Add
BLAST

Proteomic databases

PaxDbiP24049.
PRIDEiP24049.

Expressioni

Gene expression databases

BgeeiENSRNOG00000018680.
GenevisibleiP24049. RN.

Interactioni

Protein-protein interaction databases

BioGridi253514. 2 interactions.
IntActiP24049. 1 interaction.
MINTiMINT-6489586.
STRINGi10116.ENSRNOP00000025217.

Structurei

3D structure databases

ProteinModelPortaliP24049.
SMRiP24049. Positions 1-153.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L22P family.Curated

Phylogenomic databases

eggNOGiKOG3353. Eukaryota.
COG0091. LUCA.
HOGENOMiHOG000205045.
HOVERGENiHBG000955.
InParanoidiP24049.
KOiK02880.
PhylomeDBiP24049.
TreeFamiTF300042.

Family and domain databases

CDDicd00336. Ribosomal_L22. 1 hit.
Gene3Di3.90.470.10. 1 hit.
HAMAPiMF_01331_A. Ribosomal_L22_A. 1 hit.
InterProiIPR001063. Ribosomal_L22.
IPR018260. Ribosomal_L22/L17_CS.
IPR005721. Ribosomal_L22/L17_euk/arc.
[Graphical view]
PANTHERiPTHR11593. PTHR11593. 1 hit.
PfamiPF00237. Ribosomal_L22. 1 hit.
[Graphical view]
SUPFAMiSSF54843. SSF54843. 1 hit.
TIGRFAMsiTIGR01038. uL22_arch_euk. 1 hit.
PROSITEiPS00464. RIBOSOMAL_L22. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P24049-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVRYSLDPEN PTKSCKSRGS NLRVHFKNTR ETAQAIKGMH IRKATKYLKD
60 70 80 90 100
VTLKKQCVPF RRYNGGVGRC AQAKQWGWTQ GRWPKKSAEF LLHMLKNAES
110 120 130 140 150
NAELKGLDVD SLVIEHIQVN KAPKMRRRTY RAHGRINPYM SSPCHIEMIL
160 170 180
TEKEQIVPKP EEEVAQKKKI SQKKLKKQKL MARE
Length:184
Mass (Da):21,397
Last modified:January 23, 2007 - v3
Checksum:i33379CCF610D1CA0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X58389 mRNA. Translation: CAA41278.1.
X60212 mRNA. Translation: CAA42765.1.
BC098644 mRNA. Translation: AAH98644.1.
M60478 mRNA. Translation: AAA40765.1.
PIRiJN0078. R5RT17.
RefSeqiNP_958818.1. NM_201415.1.
UniGeneiRn.34429.

Genome annotation databases

GeneIDi291434.
KEGGirno:291434.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X58389 mRNA. Translation: CAA41278.1.
X60212 mRNA. Translation: CAA42765.1.
BC098644 mRNA. Translation: AAH98644.1.
M60478 mRNA. Translation: AAA40765.1.
PIRiJN0078. R5RT17.
RefSeqiNP_958818.1. NM_201415.1.
UniGeneiRn.34429.

3D structure databases

ProteinModelPortaliP24049.
SMRiP24049. Positions 1-153.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi253514. 2 interactions.
IntActiP24049. 1 interaction.
MINTiMINT-6489586.
STRINGi10116.ENSRNOP00000025217.

Proteomic databases

PaxDbiP24049.
PRIDEiP24049.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi291434.
KEGGirno:291434.

Organism-specific databases

CTDi6139.
RGDi1303019. Rpl17.

Phylogenomic databases

eggNOGiKOG3353. Eukaryota.
COG0091. LUCA.
HOGENOMiHOG000205045.
HOVERGENiHBG000955.
InParanoidiP24049.
KOiK02880.
PhylomeDBiP24049.
TreeFamiTF300042.

Miscellaneous databases

PROiP24049.

Gene expression databases

BgeeiENSRNOG00000018680.
GenevisibleiP24049. RN.

Family and domain databases

CDDicd00336. Ribosomal_L22. 1 hit.
Gene3Di3.90.470.10. 1 hit.
HAMAPiMF_01331_A. Ribosomal_L22_A. 1 hit.
InterProiIPR001063. Ribosomal_L22.
IPR018260. Ribosomal_L22/L17_CS.
IPR005721. Ribosomal_L22/L17_euk/arc.
[Graphical view]
PANTHERiPTHR11593. PTHR11593. 1 hit.
PfamiPF00237. Ribosomal_L22. 1 hit.
[Graphical view]
SUPFAMiSSF54843. SSF54843. 1 hit.
TIGRFAMsiTIGR01038. uL22_arch_euk. 1 hit.
PROSITEiPS00464. RIBOSOMAL_L22. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRL17_RAT
AccessioniPrimary (citable) accession number: P24049
Secondary accession number(s): Q4G093
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 1, 1992
Last sequence update: January 23, 2007
Last modified: September 7, 2016
This is version 115 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.