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Protein

Putative transporter AraJ

Gene

araJ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

May be involved in either the transport or processing of arabinose polymers.1 Publication

GO - Biological processi

Keywordsi

Biological processTransport

Enzyme and pathway databases

BioCyciEcoCyc:ARAJ-MONOMER

Protein family/group databases

TCDBi2.A.1.2.14 the major facilitator superfamily (mfs)

Names & Taxonomyi

Protein namesi
Recommended name:
Putative transporter AraJ
Gene namesi
Name:araJ
Ordered Locus Names:b0396, JW0386
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG10060 araJ

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 4CytoplasmicSequence analysis4
Transmembranei5 – 27HelicalSequence analysisAdd BLAST23
Topological domaini28 – 41PeriplasmicSequence analysisAdd BLAST14
Transmembranei42 – 63HelicalSequence analysisAdd BLAST22
Topological domaini64 – 69CytoplasmicSequence analysis6
Transmembranei70 – 89HelicalSequence analysisAdd BLAST20
Topological domaini90 – 93PeriplasmicSequence analysis4
Transmembranei94 – 116HelicalSequence analysisAdd BLAST23
Topological domaini117 – 128CytoplasmicSequence analysisAdd BLAST12
Transmembranei129 – 151HelicalSequence analysisAdd BLAST23
Topological domaini152 – 155PeriplasmicSequence analysis4
Transmembranei156 – 178HelicalSequence analysisAdd BLAST23
Topological domaini179 – 198CytoplasmicSequence analysisAdd BLAST20
Transmembranei199 – 221HelicalSequence analysisAdd BLAST23
Topological domaini222 – 235PeriplasmicSequence analysisAdd BLAST14
Transmembranei236 – 255HelicalSequence analysisAdd BLAST20
Topological domaini256 – 261CytoplasmicSequence analysis6
Transmembranei262 – 284HelicalSequence analysisAdd BLAST23
Topological domaini285 – 293PeriplasmicSequence analysis9
Transmembranei294 – 316HelicalSequence analysisAdd BLAST23
Topological domaini317 – 322CytoplasmicSequence analysis6
Transmembranei323 – 342HelicalSequence analysisAdd BLAST20
Topological domaini343 – 351PeriplasmicSequence analysis9
Transmembranei352 – 374HelicalSequence analysisAdd BLAST23
Topological domaini375 – 394CytoplasmicSequence analysis1 PublicationAdd BLAST20

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

Pathology & Biotechi

Disruption phenotypei

No visible effect on arabinose uptake or growth on arabinose.1 Publication

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000848321 – 394Putative transporter AraJAdd BLAST394

Proteomic databases

PaxDbiP23910
PRIDEiP23910

Expressioni

Inductioni

By arabinose.1 Publication

Interactioni

Protein-protein interaction databases

BioGridi4263172, 19 interactors
STRINGi316385.ECDH10B_0352

Structurei

3D structure databases

ProteinModelPortaliP23910
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the major facilitator superfamily.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105F27 Bacteria
COG2814 LUCA
HOGENOMiHOG000136927
InParanoidiP23910
KOiK08156
OMAiTAGHVIS
PhylomeDBiP23910

Family and domain databases

CDDicd06174 MFS, 1 hit
InterProiView protein in InterPro
IPR011701 MFS
IPR020846 MFS_dom
IPR036259 MFS_trans_sf
PfamiView protein in Pfam
PF07690 MFS_1, 1 hit
SUPFAMiSSF103473 SSF103473, 1 hit
PROSITEiView protein in PROSITE
PS50850 MFS, 1 hit

Sequencei

Sequence statusi: Complete.

P23910-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKVILSLAL GTFGLGMAEF GIMGVLTELA HNVGISIPAA GHMISYYALG
60 70 80 90 100
VVVGAPIIAL FSSRYSLKHI LLFLVALCVI GNAMFTLSSS YLMLAIGRLV
110 120 130 140 150
SGFPHGAFFG VGAIVLSKII KPGKVTAAVA GMVSGMTVAN LLGIPLGTYL
160 170 180 190 200
SQEFSWRYTF LLIAVFNIAV MASVYFWVPD IRDEAKGNLR EQFHFLRSPA
210 220 230 240 250
PWLIFAATMF GNAGVFAWFS YVKPYMMFIS GFSETAMTFI MMLVGLGMVL
260 270 280 290 300
GNMLSGRISG RYSPLRIAAV TDFIIVLALL MLFFCGGMKT TSLIFAFICC
310 320 330 340 350
AGLFALSAPL QILLLQNAKG GELLGAAGGQ IAFNLGSAVG AYCGGMMLTL
360 370 380 390
GLAYNYVALP AALLSFAAMS SLLLYGRYKR QQAADTPVLA KPLG
Length:394
Mass (Da):41,926
Last modified:March 1, 1992 - v1
Checksum:i40C1B0F1451A817A
GO

Sequence cautioni

The sequence AAB18120 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M64787 Genomic DNA Translation: AAA23474.1
U73857 Genomic DNA Translation: AAB18120.1 Different initiation.
U00096 Genomic DNA Translation: AAC73499.1
AP009048 Genomic DNA Translation: BAE76176.1
PIRiB43750
RefSeqiNP_414930.3, NC_000913.3
WP_001326926.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC73499; AAC73499; b0396
BAE76176; BAE76176; BAE76176
GeneIDi949077
KEGGiecj:JW0386
eco:b0396
PATRICifig|511145.12.peg.409

Similar proteinsi

Entry informationi

Entry nameiARAJ_ECOLI
AccessioniPrimary (citable) accession number: P23910
Secondary accession number(s): Q2MC30
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 1, 1992
Last sequence update: March 1, 1992
Last modified: March 28, 2018
This is version 133 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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