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Protein

UPF0701 protein YicC

Gene

yicC

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG11192-MONOMER.
ECOL316407:JW3619-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0701 protein YicC
Gene namesi
Name:yicC
Ordered Locus Names:b3644, JW3619
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11192. yicC.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: EcoCyc
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001696131 – 287UPF0701 protein YicCAdd BLAST287

Proteomic databases

EPDiP23839.
PaxDbiP23839.
PRIDEiP23839.

Interactioni

Protein-protein interaction databases

BioGridi4261234. 16 interactors.
DIPiDIP-12428N.
IntActiP23839. 12 interactors.
MINTiMINT-1230449.
STRINGi511145.b3644.

Structurei

3D structure databases

ProteinModelPortaliP23839.
SMRiP23839.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0701 family.Curated

Phylogenomic databases

eggNOGiENOG4105DSJ. Bacteria.
COG1561. LUCA.
HOGENOMiHOG000037752.
InParanoidiP23839.
OMAiQEMILLA.
PhylomeDBiP23839.

Family and domain databases

InterProiIPR005229. CHP00255.
IPR013551. DUF1732.
IPR013527. YicC-like_N.
[Graphical view]
PfamiPF08340. DUF1732. 1 hit.
PF03755. YicC_N. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00255. TIGR00255. 1 hit.

Sequencei

Sequence statusi: Complete.

P23839-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIRSMTAYAR REIKGEWGSA TWEMRSVNQR YLETYFRLPE QFRSLEPVVR
60 70 80 90 100
ERIRSRLTRG KVECTLRYEP DVSAQGELIL NEKLAKQLVT AANWVKMQSD
110 120 130 140 150
EGEINPVDIL RWPGVMAAQE QDLDAIAAEI LAALDGTLDD FIVARETEGQ
160 170 180 190 200
ALKALIEQRL EGVTAEVVKV RSHMPEILQW QRERLVAKLE DAQVQLENNR
210 220 230 240 250
LEQELVLLAQ RIDVAEELDR LEAHVKETYN ILKKKEAVGR RLDFMMQEFN
260 270 280
RESNTLASKS INAEVTNSAI ELKVLIEQMR EQIQNIE
Length:287
Mass (Da):33,175
Last modified:July 1, 1993 - v2
Checksum:i7368D35E06FCA3B9
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti148E → Q in CAA32451 (PubMed:2664418).Curated1
Sequence conflicti184 – 189RLVAKL → SGREV in CAA32451 (PubMed:2664418).Curated6

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X14235 Genomic DNA. Translation: CAA32451.1.
L10328 Genomic DNA. Translation: AAA61997.1.
U00096 Genomic DNA. Translation: AAC76668.1.
AP009048 Genomic DNA. Translation: BAE77649.1.
PIRiF65165.
RefSeqiNP_418101.1. NC_000913.3.
WP_000621340.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC76668; AAC76668; b3644.
BAE77649; BAE77649; BAE77649.
GeneIDi948154.
KEGGiecj:JW3619.
eco:b3644.
PATRICi32122775. VBIEscCol129921_3764.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X14235 Genomic DNA. Translation: CAA32451.1.
L10328 Genomic DNA. Translation: AAA61997.1.
U00096 Genomic DNA. Translation: AAC76668.1.
AP009048 Genomic DNA. Translation: BAE77649.1.
PIRiF65165.
RefSeqiNP_418101.1. NC_000913.3.
WP_000621340.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP23839.
SMRiP23839.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261234. 16 interactors.
DIPiDIP-12428N.
IntActiP23839. 12 interactors.
MINTiMINT-1230449.
STRINGi511145.b3644.

Proteomic databases

EPDiP23839.
PaxDbiP23839.
PRIDEiP23839.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC76668; AAC76668; b3644.
BAE77649; BAE77649; BAE77649.
GeneIDi948154.
KEGGiecj:JW3619.
eco:b3644.
PATRICi32122775. VBIEscCol129921_3764.

Organism-specific databases

EchoBASEiEB1178.
EcoGeneiEG11192. yicC.

Phylogenomic databases

eggNOGiENOG4105DSJ. Bacteria.
COG1561. LUCA.
HOGENOMiHOG000037752.
InParanoidiP23839.
OMAiQEMILLA.
PhylomeDBiP23839.

Enzyme and pathway databases

BioCyciEcoCyc:EG11192-MONOMER.
ECOL316407:JW3619-MONOMER.

Miscellaneous databases

PROiP23839.

Family and domain databases

InterProiIPR005229. CHP00255.
IPR013551. DUF1732.
IPR013527. YicC-like_N.
[Graphical view]
PfamiPF08340. DUF1732. 1 hit.
PF03755. YicC_N. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00255. TIGR00255. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiYICC_ECOLI
AccessioniPrimary (citable) accession number: P23839
Secondary accession number(s): Q2M7V7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1991
Last sequence update: July 1, 1993
Last modified: November 2, 2016
This is version 129 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Miscellaneous

Essential for E.coli under special growth condition.

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.