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P23656 (CCMO_SYNP6) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 74. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized protein CcmO
Gene names
Name:ccmO
Ordered Locus Names:syc0131_c
OrganismSynechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) (Anacystis nidulans) [Complete proteome] [HAMAP]
Taxonomic identifier269084 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus

Protein attributes

Sequence length276 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Function

May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered.

Domain

Contains 2 homologous domains.

Sequence similarities

Belongs to the bacterial microcompartments protein family.

Sequence caution

The sequence CAA26971.1 differs from that shown. Reason: Frameshift at position 102.

Ontologies

Keywords
   DomainRepeat
Signal
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2929 Potential
Chain30 – 276247Uncharacterized protein CcmO
PRO_0000004788

Experimental info

Sequence conflict811Q → T in CAA26970. Ref.1

Sequences

Sequence LengthMass (Da)Tools
P23656 [UniParc].

Last modified March 1, 2005. Version 2.
Checksum: F25514DB099D931F

FASTA27629,431
        10         20         30         40         50         60 
MSASLPAYSQ PRNAGALGVI CTRSFPAVVG TADMMLKSAD VTLIGYEKTG SGFCTAIIRG 

        70         80         90        100        110        120 
GYADIKLALE AGVATARQFE QYVSSTILPR PQGNLEAVLP ISRRLSQEAM ATRSHQNVGA 

       130        140        150        160        170        180 
IGLIETNGFP ALVGAADAML KSANVKLICY EKTGSGLCTA IVQGTVSNVT VAVEAGMYAA 

       190        200        210        220        230        240 
ERIGQLNAIM VIPRPLDDLM DSLPEPQSDS EAAQPLQLPL RVREKQPLLE LPELERQPIA 

       250        260        270 
IEAPRLLAEE RQSALELAQE TPLAEPLELP NPRDDQ 

« Hide

References

« Hide 'large scale' references
[1]"Genes for the large and small subunits of ribulose-1,5-bisphosphate carboxylase/oxygenase constitute a single operon in a cyanobacterium Anacystis nidulans 6301."
Shinozaki K., Sugiura M.
Mol. Gen. Genet. 200:27-32(1985)
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]"Complete nucleotide sequence of the freshwater unicellular cyanobacterium Synechococcus elongatus PCC 6301 chromosome: gene content and organization."
Sugita C., Ogata K., Shikata M., Jikuya H., Takano J., Furumichi M., Kanehisa M., Omata T., Sugiura M., Sugita M.
Photosyn. Res. 93:55-67(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27144 / PCC 6301 / SAUG 1402/1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
X03220 Genomic DNA. Translation: CAA26970.1. Frameshift.
X03220 Genomic DNA. Translation: CAA26971.1. Frameshift.
AP008231 Genomic DNA. Translation: BAD78321.1.
PIRS07310.
RefSeqYP_170841.1. NC_006576.1.

3D structure databases

ProteinModelPortalP23656.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING269084.syc0131_c.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAD78321; BAD78321; syc0131_c.
GeneID3199406.
KEGGsyc:syc0131_c.
PATRIC32485761. VBISynElo117686_0159.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG4577.
HOGENOMHOG000035855.
KOK08700.
OMACTAIVRG.
OrthoDBEOG6ZH2H4.

Enzyme and pathway databases

BioCycSELO269084:GCDQ-136-MONOMER.

Family and domain databases

InterProIPR020808. Bact_microcomp_CS.
IPR000249. Microcompartment_bac.
[Graphical view]
PfamPF00936. BMC. 2 hits.
[Graphical view]
SMARTSM00877. BMC. 2 hits.
[Graphical view]
PROSITEPS01139. BACT_MICROCOMP. 2 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameCCMO_SYNP6
AccessionPrimary (citable) accession number: P23656
Secondary accession number(s): P23655, Q5N5U7
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1991
Last sequence update: March 1, 2005
Last modified: May 14, 2014
This is version 74 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families