P23610 (F8I2_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 90.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Factor VIII intron 22 protein Alternative name(s): CpG island protein | ||||||||||||||
| Gene names |
| ||||||||||||||
| Organism | Homo sapiens (Human) | ||||||||||||||
| Taxonomic identifier | 9606 [NCBI] | ||||||||||||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 371 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Not known. Possible housekeeping role. |
| Tissue specificity | Produced abundantly in a wide variety of cell types. |
| Sequence caution | The sequence AAA35713.1 differs from that shown. Reason: Frameshift at positions 231, 257 and 367. |
Ontologies
| Keywords | |
|---|---|
| PTM | Acetylation |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Cellular component | nucleus Inferred from direct assay. Source: LIFEdb |
| Molecular function | binding Inferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Initiator methionine | 1 | 1 | Removed | ||||||
| Chain | 2 – 371 | 370 | Factor VIII intron 22 protein | PRO_0000087159 | |||||
Amino acid modifications | |||||||||
| Modified residue | 2 | 1 | N-acetylalanine Ref.6 | ||||||
Experimental info | |||||||||
| Sequence conflict | 105 – 107 | 3 | RQR → PA in AAA35713. Ref.1 | ||||||
Sequences
| ||||||||||||||||||
References
| « Hide 'large scale' references | |
| [1] | "A transcribed gene in an intron of the human factor VIII gene." Levinson B., Kenwrick S., Lakich D., Hammonds G. Jr., Gitschier J. Genomics 7:1-11(1990) [PubMed: 2110545] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Tissue: Liver. |
| [2] | "Gene conversion and evolution of Xq28 duplicons involved in recurring inversions causing severe haemophilia A." Bagnall R.D., Green P.M., Giannelli F. Submitted (MAY-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. |
| [3] | "The DNA sequence of the human X chromosome." Ross M.T., Grafham D.V., Coffey A.J., Scherer S., McLay K., Muzny D., Platzer M., Howell G.R., Burrows C., Bird C.P., Frankish A., Lovell F.L., Howe K.L., Ashurst J.L., Fulton R.S., Sudbrak R., Wen G., Jones M.C. Bentley D.R.Nature 434:325-337(2005) [PubMed: 15772651] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [4] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [5] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Blood and Brain. |
| [6] | "Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach." Gauci S., Helbig A.O., Slijper M., Krijgsveld J., Heck A.J., Mohammed S. Anal. Chem. 81:4493-4501(2009) [PubMed: 19413330] [Abstract] Cited for: ACETYLATION [LARGE SCALE ANALYSIS] AT ALA-2, MASS SPECTROMETRY. Tissue: Embryonic kidney. |
| [7] | "Initial characterization of the human central proteome." Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J. BMC Syst. Biol. 5:17-17(2011) [PubMed: 21269460] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | M34677 Genomic DNA. Translation: AAA35713.1. Frameshift. AY619999 Genomic DNA. Translation: AAT44606.1. AY620000 Genomic DNA. Translation: AAT44607.1. AY620001 Genomic DNA. Translation: AAT44608.1. BX276110 Genomic DNA. Translation: CAH71439.1. BX682237 Genomic DNA. Translation: CAI41333.1. BX842559 Genomic DNA. Translation: CAI41669.1. CH471172 Genomic DNA. Translation: EAW72648.1. BC039693 mRNA. Translation: AAH39693.1. BC071963 mRNA. Translation: AAH71963.1. |
| IPI | IPI00012433. |
| PIR | B42832. |
| RefSeq | NP_001007524.1. NM_001007523.1. NP_001007525.1. NM_001007524.1. NP_036283.2. NM_012151.3. |
| UniGene | Hs.533543. Hs.593687. |
3D structure databases | |
| ProteinModelPortal | P23610. |
| SMR | P23610. Positions 50-77, 85-214. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | P23610. |
Proteomic databases | |
| PRIDE | P23610. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000369445; ENSP00000358454; ENSG00000185990. ENST00000369446; ENSP00000358456; ENSG00000197932. ENST00000369505; ENSP00000358518; ENSG00000198444. |
| GeneID | 474383. 474384. 8263. |
| KEGG | hsa:474383. hsa:474384. hsa:8263. |
| UCSC | uc004fmv.1. human. |
Organism-specific databases | |
| CTD | 474383. 474384. 8263. |
| GeneCards | GC0XM154686. GC0XP154114. GC0XP154611. |
| H-InvDB | HIX0028450. |
| HGNC | HGNC:3547. F8A1. HGNC:31849. F8A2. HGNC:31850. F8A3. |
| MIM | 305423. gene. |
| neXtProt | NX_P23610. |
| PharmGKB | PA27953. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | prNOG05980. |
| GeneTree | ENSGT00390000016992. |
| HOGENOM | HBG445064. |
| HOVERGEN | HBG005629. |
| InParanoid | P23610. |
| OMA | LRKPNVA. |
| OrthoDB | EOG4TMR2K. |
| PhylomeDB | P23610. |
Gene expression databases | |
| Bgee | P23610. |
| CleanEx | HS_F8A1. HS_F8A2. |
| Genevestigator | P23610. |
| GermOnline | ENSG00000185990. Homo sapiens. ENSG00000197932. Homo sapiens. ENSG00000198444. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR011990. TPR-like_helical. [Graphical view] |
| Gene3D | G3DSA:1.25.40.10. TPR-like_helical. 1 hit. |
| ProtoNet | Search... |
Other | |
| NextBio | 111709. |
| SOURCE | Search... |
Entry information
| Entry name | F8I2_HUMAN | ||||||||
| Accession | Primary (citable) accession number: P23610 Secondary accession number(s): Q5HY66, Q8IXP3 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome X Human chromosome X: entries, gene names and cross-references to MIM |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |

Clusters with