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Protein

30S ribosomal protein S6

Gene

rpsF

Organism
Thermus thermophilus
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Located on the outer edge of the platform on the body of the 30S subunit.By similarity

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S6
Alternative name(s):
TS9
Gene namesi
Name:rpsF
Synonyms:rps6
OrganismiThermus thermophilus
Taxonomic identifieri274 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001768641 – 10130S ribosomal protein S6Add BLAST101

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit. Forms a tight heterodimer with protein S18 (By similarity).By similarity

Protein-protein interaction databases

DIPiDIP-6173N.

Structurei

Secondary structure

1101
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi2 – 10Combined sources9
Helixi16 – 32Combined sources17
Beta strandi36 – 52Combined sources17
Beta strandi55 – 67Combined sources13
Helixi69 – 71Combined sources3
Helixi72 – 80Combined sources9
Beta strandi85 – 92Combined sources8

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1CQMX-ray1.65A/B1-101[»]
1CQNX-ray2.10A/B1-101[»]
1LOUX-ray1.95A1-101[»]
1QJHX-ray2.20A1-101[»]
1RISX-ray2.00A1-101[»]
1TWTmodel-I1-101[»]
2BVZX-ray2.20A1-101[»]
2BXJX-ray2.40A/B1-101[»]
4V8XX-ray3.35AF/CF1-101[»]
ProteinModelPortaliP23370.
SMRiP23370.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP23370.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiENOG41082AW. Bacteria.
COG0360. LUCA.

Family and domain databases

CDDicd00473. bS6. 1 hit.
Gene3Di3.30.70.60. 1 hit.
HAMAPiMF_00360. Ribosomal_S6. 1 hit.
InterProiView protein in InterPro
IPR000529. Ribosomal_S6.
IPR020815. Ribosomal_S6_CS.
IPR020814. Ribosomal_S6_plastid/chlpt.
IPR035980. Ribosomal_S6_sf.
IPR014717. Transl_elong_EF1B/ribosomal_S6.
PANTHERiPTHR21011. PTHR21011. 1 hit.
PfamiView protein in Pfam
PF01250. Ribosomal_S6. 1 hit.
SUPFAMiSSF54995. SSF54995. 1 hit.
TIGRFAMsiTIGR00166. S6. 1 hit.
PROSITEiView protein in PROSITE
PS01048. RIBOSOMAL_S6. 1 hit.

Sequencei

Sequence statusi: Complete.

P23370-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRRYEVNIVL NPNLDQSQLA LEKEIIQRAL ENYGARVEKV EELGLRRLAY
60 70 80 90 100
PIAKDPQGYF LWYQVEMPED RVNDLARELR IRDNVRRVMV VKSQEPFLAN

A
Length:101
Mass (Da):11,973
Last modified:April 1, 1993 - v2
Checksum:i4FEE8005C74902E5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF146075 Genomic DNA. Translation: AAF27295.1.

Similar proteinsi

Entry informationi

Entry nameiRS6_THETH
AccessioniPrimary (citable) accession number: P23370
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1991
Last sequence update: April 1, 1993
Last modified: October 25, 2017
This is version 104 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Direct protein sequencing

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families