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P23350

- RL10_SYNY3

UniProt

P23350 - RL10_SYNY3

Protein

50S ribosomal protein L10

Gene

rplJ

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 83 (01 Oct 2014)
      Sequence version 1 (01 Nov 1991)
      Previous versions | rss
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    Functioni

    Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors.By similarity

    GO - Molecular functioni

    1. large ribosomal subunit rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. ribosome biogenesis Source: InterPro
    2. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L10
    Gene namesi
    Name:rplJ
    Synonyms:rpl10
    Ordered Locus Names:sll1745
    OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
    Taxonomic identifieri1111708 [NCBI]
    Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
    ProteomesiUP000001425: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 17317350S ribosomal protein L10PRO_0000154733Add
    BLAST

    Proteomic databases

    PaxDbiP23350.

    Interactioni

    Subunit structurei

    Part of the ribosomal stalk of the 50S ribosomal subunit. The N-terminus interacts with L11 and the large rRNA to form the base of the stalk. The C-terminus forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex By similarity.By similarity

    Protein-protein interaction databases

    STRINGi1148.sll1745.

    Structurei

    3D structure databases

    ProteinModelPortaliP23350.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L10P family.Curated

    Phylogenomic databases

    eggNOGiCOG0244.
    HOGENOMiHOG000004852.
    KOiK02864.
    OMAiDQVGKQK.
    OrthoDBiEOG6DNTDR.
    PhylomeDBiP23350.

    Family and domain databases

    HAMAPiMF_00362. Ribosomal_L10.
    InterProiIPR022973. Ribosomal_L10.
    IPR001790. Ribosomal_L10/acidic_P0.
    IPR002363. Ribosomal_L10_eubac_CS.
    [Graphical view]
    PfamiPF00466. Ribosomal_L10. 1 hit.
    [Graphical view]
    PROSITEiPS01109. RIBOSOMAL_L10. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P23350-1 [UniParc]FASTAAdd to Basket

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    MGRTRENKAT VISDVQELFQ DAQMTVIIDY QGLTVAEITD LRNRLRPLGG    50
    TCKIAKNTLV RRALAGQEAW SPMEEFLTGT TAILVLKEDL GGAIKAYKKF 100
    QKDTKKTELR GGVLEGKSLT QADVEAIGDL PSKEQLMGQI AGGINALATK 150
    IALGIKEVPA SVARGLQAHV DKE 173
    Length:173
    Mass (Da):18,676
    Last modified:November 1, 1991 - v1
    Checksum:i46B8C44D644F40A4
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X53178 Genomic DNA. Translation: CAA37317.1.
    BA000022 Genomic DNA. Translation: BAA17417.1.
    PIRiS13068.
    RefSeqiNP_440737.1. NC_000911.1.
    YP_005650796.1. NC_017277.1.
    YP_007450620.1. NC_020286.1.

    Genome annotation databases

    EnsemblBacteriaiBAA17417; BAA17417; BAA17417.
    GeneIDi954040.
    KEGGisyn:sll1745.
    syy:SYNGTS_0843.
    syz:MYO_18480.
    PATRICi23838692. VBISynSp132158_0913.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X53178 Genomic DNA. Translation: CAA37317.1 .
    BA000022 Genomic DNA. Translation: BAA17417.1 .
    PIRi S13068.
    RefSeqi NP_440737.1. NC_000911.1.
    YP_005650796.1. NC_017277.1.
    YP_007450620.1. NC_020286.1.

    3D structure databases

    ProteinModelPortali P23350.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 1148.sll1745.

    Proteomic databases

    PaxDbi P23350.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAA17417 ; BAA17417 ; BAA17417 .
    GeneIDi 954040.
    KEGGi syn:sll1745.
    syy:SYNGTS_0843.
    syz:MYO_18480.
    PATRICi 23838692. VBISynSp132158_0913.

    Phylogenomic databases

    eggNOGi COG0244.
    HOGENOMi HOG000004852.
    KOi K02864.
    OMAi DQVGKQK.
    OrthoDBi EOG6DNTDR.
    PhylomeDBi P23350.

    Family and domain databases

    HAMAPi MF_00362. Ribosomal_L10.
    InterProi IPR022973. Ribosomal_L10.
    IPR001790. Ribosomal_L10/acidic_P0.
    IPR002363. Ribosomal_L10_eubac_CS.
    [Graphical view ]
    Pfami PF00466. Ribosomal_L10. 1 hit.
    [Graphical view ]
    PROSITEi PS01109. RIBOSOMAL_L10. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Cloning and characterization of the genes for ribosomal proteins L10 and L12 from Synechocystis Sp. PCC 6803: comparison of gene clustering pattern and protein sequence homology between cyanobacteria and chloroplasts."
      Sibold C., Subramanian A.R.
      Biochim. Biophys. Acta 1050:61-68(1990) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    2. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
      Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
      , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
      DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: PCC 6803 / Kazusa.

    Entry informationi

    Entry nameiRL10_SYNY3
    AccessioniPrimary (citable) accession number: P23350
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 1, 1991
    Last sequence update: November 1, 1991
    Last modified: October 1, 2014
    This is version 83 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Ribosomal proteins
      Ribosomal proteins families and list of entries
    2. SIMILARITY comments
      Index of protein domains and families
    3. Synechocystis PCC 6803
      Synechocystis (strain PCC 6803): entries and gene names

    External Data

    Dasty 3