Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

P23349

- RL7_SYNY3

UniProt

P23349 - RL7_SYNY3

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

50S ribosomal protein L7/L12

Gene

rplL

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli

Functioni

Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation.UniRule annotation

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L7/L12UniRule annotation
Gene namesi
Name:rplLUniRule annotation
Synonyms:rpl12UniRule annotation
Ordered Locus Names:sll1746
OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
Taxonomic identifieri1111708 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
ProteomesiUP000001425: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methioninei1 – 11Removed1 Publication
Chaini2 – 12812750S ribosomal protein L7/L12PRO_0000157595Add
BLAST

Proteomic databases

PaxDbiP23349.

Interactioni

Subunit structurei

Homodimer. Part of the ribosomal stalk of the 50S ribosomal subunit. Forms a multimeric L10(L12)X complex, where L10 forms an elongated spine to which 2 to 4 L12 dimers bind in a sequential fashion. Binds GTP-bound translation factors.UniRule annotation

Protein-protein interaction databases

IntActiP23349. 1 interaction.
STRINGi1148.sll1746.

Structurei

3D structure databases

ProteinModelPortaliP23349.
SMRiP23349. Positions 54-128.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L7/L12P family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0222.
HOGENOMiHOG000248813.
InParanoidiP23349.
KOiK02935.
OMAiEFISNMT.
OrthoDBiEOG6WMJ69.
PhylomeDBiP23349.

Family and domain databases

Gene3Di3.30.1390.10. 1 hit.
HAMAPiMF_00368. Ribosomal_L7_L12.
InterProiIPR000206. Ribosomal_L7/12.
IPR014719. Ribosomal_L7/12_C/ClpS-like.
IPR013823. Ribosomal_L7/L12_C.
IPR008932. Ribosomal_L7/L12_oligo.
[Graphical view]
PANTHERiPTHR11809. PTHR11809. 1 hit.
PfamiPF00542. Ribosomal_L12. 1 hit.
[Graphical view]
ProDomiPD001326. Ribosomal_L7/L12_C. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF48300. SSF48300. 1 hit.
SSF54736. SSF54736. 1 hit.
TIGRFAMsiTIGR00855. L12. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P23349-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSAATDQILE QLKSLSLLEA SELVKQIEEA FGVSAAAPVG GMVMAAAAAA
60 70 80 90 100
PAEAAEEKTE FDVILEEVPA DKKIAVLKVV RTITGLGLKE AKELVESTPK
110 120
AIKEATGKDD AEAIKKQIEE AGGKAAVK
Length:128
Mass (Da):13,259
Last modified:January 23, 2007 - v3
Checksum:iFCBF73A205A53946
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X53178 Genomic DNA. Translation: CAA37318.1.
BA000022 Genomic DNA. Translation: BAA17416.1.
X67516 Genomic DNA. Translation: CAA47854.1.
PIRiS13069.
RefSeqiNP_440736.1. NC_000911.1.
YP_005650795.1. NC_017277.1.
YP_007450619.1. NC_020286.1.

Genome annotation databases

EnsemblBacteriaiBAA17416; BAA17416; BAA17416.
GeneIDi954039.
KEGGisyn:sll1746.
syy:SYNGTS_0842.
syz:MYO_18470.
PATRICi23838690. VBISynSp132158_0912.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X53178 Genomic DNA. Translation: CAA37318.1 .
BA000022 Genomic DNA. Translation: BAA17416.1 .
X67516 Genomic DNA. Translation: CAA47854.1 .
PIRi S13069.
RefSeqi NP_440736.1. NC_000911.1.
YP_005650795.1. NC_017277.1.
YP_007450619.1. NC_020286.1.

3D structure databases

ProteinModelPortali P23349.
SMRi P23349. Positions 54-128.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

IntActi P23349. 1 interaction.
STRINGi 1148.sll1746.

Proteomic databases

PaxDbi P23349.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAA17416 ; BAA17416 ; BAA17416 .
GeneIDi 954039.
KEGGi syn:sll1746.
syy:SYNGTS_0842.
syz:MYO_18470.
PATRICi 23838690. VBISynSp132158_0912.

Phylogenomic databases

eggNOGi COG0222.
HOGENOMi HOG000248813.
InParanoidi P23349.
KOi K02935.
OMAi EFISNMT.
OrthoDBi EOG6WMJ69.
PhylomeDBi P23349.

Family and domain databases

Gene3Di 3.30.1390.10. 1 hit.
HAMAPi MF_00368. Ribosomal_L7_L12.
InterProi IPR000206. Ribosomal_L7/12.
IPR014719. Ribosomal_L7/12_C/ClpS-like.
IPR013823. Ribosomal_L7/L12_C.
IPR008932. Ribosomal_L7/L12_oligo.
[Graphical view ]
PANTHERi PTHR11809. PTHR11809. 1 hit.
Pfami PF00542. Ribosomal_L12. 1 hit.
[Graphical view ]
ProDomi PD001326. Ribosomal_L7/L12_C. 1 hit.
[Graphical view ] [Entries sharing at least one domain ]
SUPFAMi SSF48300. SSF48300. 1 hit.
SSF54736. SSF54736. 1 hit.
TIGRFAMsi TIGR00855. L12. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Cloning and characterization of the genes for ribosomal proteins L10 and L12 from Synechocystis Sp. PCC 6803: comparison of gene clustering pattern and protein sequence homology between cyanobacteria and chloroplasts."
    Sibold C., Subramanian A.R.
    Biochim. Biophys. Acta 1050:61-68(1990) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
    Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
    , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
    DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 6803 / Kazusa.
  3. "A novel operon organization involving the genes for chorismate synthase (aromatic biosynthesis pathway) and ribosomal GTPase center proteins (L11, L1, L10, L12: rplKAJL) in cyanobacterium Synechocystis PCC 6803."
    Schmidt J., Bubunenko M., Subramanian A.R.
    J. Biol. Chem. 268:27447-27457(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 117-128.
  4. "Towards a proteome project of cyanobacterium Synechocystis sp. strain PCC6803: linking 130 protein spots with their respective genes."
    Sazuka T., Ohara O.
    Electrophoresis 18:1252-1258(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: PROTEIN SEQUENCE OF 2-8.

Entry informationi

Entry nameiRL7_SYNY3
AccessioniPrimary (citable) accession number: P23349
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1991
Last sequence update: January 23, 2007
Last modified: October 29, 2014
This is version 102 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families
  3. Synechocystis PCC 6803
    Synechocystis (strain PCC 6803): entries and gene names

External Data

Dasty 3