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P23349

- RL7_SYNY3

UniProt

P23349 - RL7_SYNY3

Protein

50S ribosomal protein L7/L12

Gene

rplL

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
  1. Functioni

    Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation.UniRule annotation

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L7/L12UniRule annotation
    Gene namesi
    Name:rplLUniRule annotation
    Synonyms:rpl12UniRule annotation
    Ordered Locus Names:sll1746
    OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
    Taxonomic identifieri1111708 [NCBI]
    Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
    ProteomesiUP000001425: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Initiator methioninei1 – 11Removed1 Publication
    Chaini2 – 12812750S ribosomal protein L7/L12PRO_0000157595Add
    BLAST

    Proteomic databases

    PaxDbiP23349.

    Interactioni

    Subunit structurei

    Homodimer. Part of the ribosomal stalk of the 50S ribosomal subunit. Forms a multimeric L10(L12)X complex, where L10 forms an elongated spine to which 2 to 4 L12 dimers bind in a sequential fashion. Binds GTP-bound translation factors.UniRule annotation

    Protein-protein interaction databases

    IntActiP23349. 1 interaction.
    STRINGi1148.sll1746.

    Structurei

    3D structure databases

    ProteinModelPortaliP23349.
    SMRiP23349. Positions 54-128.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L7/L12P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0222.
    HOGENOMiHOG000248813.
    KOiK02935.
    OMAiEFISNMT.
    OrthoDBiEOG6WMJ69.
    PhylomeDBiP23349.

    Family and domain databases

    Gene3Di3.30.1390.10. 1 hit.
    HAMAPiMF_00368. Ribosomal_L7_L12.
    InterProiIPR000206. Ribosomal_L7/12.
    IPR014719. Ribosomal_L7/12_C/ClpS-like.
    IPR013823. Ribosomal_L7/L12_C.
    IPR008932. Ribosomal_L7/L12_oligo.
    [Graphical view]
    PANTHERiPTHR11809. PTHR11809. 1 hit.
    PfamiPF00542. Ribosomal_L12. 1 hit.
    [Graphical view]
    ProDomiPD001326. Ribosomal_L7/L12_C. 1 hit.
    [Graphical view] [Entries sharing at least one domain]
    SUPFAMiSSF48300. SSF48300. 1 hit.
    SSF54736. SSF54736. 1 hit.
    TIGRFAMsiTIGR00855. L12. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    P23349-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSAATDQILE QLKSLSLLEA SELVKQIEEA FGVSAAAPVG GMVMAAAAAA    50
    PAEAAEEKTE FDVILEEVPA DKKIAVLKVV RTITGLGLKE AKELVESTPK 100
    AIKEATGKDD AEAIKKQIEE AGGKAAVK 128
    Length:128
    Mass (Da):13,259
    Last modified:January 23, 2007 - v3
    Checksum:iFCBF73A205A53946
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X53178 Genomic DNA. Translation: CAA37318.1.
    BA000022 Genomic DNA. Translation: BAA17416.1.
    X67516 Genomic DNA. Translation: CAA47854.1.
    PIRiS13069.
    RefSeqiNP_440736.1. NC_000911.1.
    YP_005650795.1. NC_017277.1.
    YP_007450619.1. NC_020286.1.

    Genome annotation databases

    EnsemblBacteriaiBAA17416; BAA17416; BAA17416.
    GeneIDi954039.
    KEGGisyn:sll1746.
    syy:SYNGTS_0842.
    syz:MYO_18470.
    PATRICi23838690. VBISynSp132158_0912.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X53178 Genomic DNA. Translation: CAA37318.1 .
    BA000022 Genomic DNA. Translation: BAA17416.1 .
    X67516 Genomic DNA. Translation: CAA47854.1 .
    PIRi S13069.
    RefSeqi NP_440736.1. NC_000911.1.
    YP_005650795.1. NC_017277.1.
    YP_007450619.1. NC_020286.1.

    3D structure databases

    ProteinModelPortali P23349.
    SMRi P23349. Positions 54-128.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    IntActi P23349. 1 interaction.
    STRINGi 1148.sll1746.

    Proteomic databases

    PaxDbi P23349.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAA17416 ; BAA17416 ; BAA17416 .
    GeneIDi 954039.
    KEGGi syn:sll1746.
    syy:SYNGTS_0842.
    syz:MYO_18470.
    PATRICi 23838690. VBISynSp132158_0912.

    Phylogenomic databases

    eggNOGi COG0222.
    HOGENOMi HOG000248813.
    KOi K02935.
    OMAi EFISNMT.
    OrthoDBi EOG6WMJ69.
    PhylomeDBi P23349.

    Family and domain databases

    Gene3Di 3.30.1390.10. 1 hit.
    HAMAPi MF_00368. Ribosomal_L7_L12.
    InterProi IPR000206. Ribosomal_L7/12.
    IPR014719. Ribosomal_L7/12_C/ClpS-like.
    IPR013823. Ribosomal_L7/L12_C.
    IPR008932. Ribosomal_L7/L12_oligo.
    [Graphical view ]
    PANTHERi PTHR11809. PTHR11809. 1 hit.
    Pfami PF00542. Ribosomal_L12. 1 hit.
    [Graphical view ]
    ProDomi PD001326. Ribosomal_L7/L12_C. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    SUPFAMi SSF48300. SSF48300. 1 hit.
    SSF54736. SSF54736. 1 hit.
    TIGRFAMsi TIGR00855. L12. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Cloning and characterization of the genes for ribosomal proteins L10 and L12 from Synechocystis Sp. PCC 6803: comparison of gene clustering pattern and protein sequence homology between cyanobacteria and chloroplasts."
      Sibold C., Subramanian A.R.
      Biochim. Biophys. Acta 1050:61-68(1990) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    2. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
      Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
      , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
      DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: PCC 6803 / Kazusa.
    3. "A novel operon organization involving the genes for chorismate synthase (aromatic biosynthesis pathway) and ribosomal GTPase center proteins (L11, L1, L10, L12: rplKAJL) in cyanobacterium Synechocystis PCC 6803."
      Schmidt J., Bubunenko M., Subramanian A.R.
      J. Biol. Chem. 268:27447-27457(1993) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 117-128.
    4. "Towards a proteome project of cyanobacterium Synechocystis sp. strain PCC6803: linking 130 protein spots with their respective genes."
      Sazuka T., Ohara O.
      Electrophoresis 18:1252-1258(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: PROTEIN SEQUENCE OF 2-8.

    Entry informationi

    Entry nameiRL7_SYNY3
    AccessioniPrimary (citable) accession number: P23349
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 1, 1991
    Last sequence update: January 23, 2007
    Last modified: October 1, 2014
    This is version 101 of the entry and version 3 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Direct protein sequencing, Reference proteome

    Documents

    1. Ribosomal proteins
      Ribosomal proteins families and list of entries
    2. SIMILARITY comments
      Index of protein domains and families
    3. Synechocystis PCC 6803
      Synechocystis (strain PCC 6803): entries and gene names

    External Data

    Dasty 3