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Reviewed, UniProtKB/Swiss-Prot P23265 (O1078_RAT)

Last modified June 16, 2009. Version 61. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

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Names and origin

Protein namesRecommended name:
    Olfactory receptor 1078
Alternative name(s):
    Olfactory receptor-like protein F3
Gene names
Name: Olr1078
OrganismRattus norvegicus (Rat)
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

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Protein attributes

Sequence length333 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

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General annotation (Comments)

Function

Odorant receptor Potential.

Subcellular location

Cell membrane; Multi-pass membrane protein.

Tissue specificity

Olfactory epithelium.

Sequence similarities

Belongs to the G-protein coupled receptor 1 family.

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Ontologies

Keywords
   Biological processOlfaction
Sensory transduction
   Cellular componentCell membrane
Membrane
   DomainTransmembrane
   Molecular functionG-protein coupled receptor
Receptor
Transducer
   PTMDisulfide bond
Glycoprotein
Gene Ontology (GO)
   Cellular componentplasma membrane

Inferred from electronic annotation. Source: UniProtKB-SubCell

Complete GO annotation...

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Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 333333Olfactory receptor 1078
PRO_0000150872

Regions

Topological domain1 – 2525Extracellular Potential
Transmembrane26 – 50251 Potential
Topological domain51 – 577Cytoplasmic Potential
Transmembrane58 – 79222 Potential
Topological domain80 – 10021Extracellular Potential
Transmembrane101 – 120203 Potential
Topological domain121 – 13919Cytoplasmic Potential
Transmembrane140 – 158194 Potential
Topological domain159 – 19638Extracellular Potential
Transmembrane197 – 219235 Potential
Topological domain220 – 23617Cytoplasmic Potential
Transmembrane237 – 260246 Potential
Topological domain261 – 27212Extracellular Potential
Transmembrane273 – 292207 Potential
Topological domain293 – 33341Cytoplasmic Potential

Amino acid modifications

Glycosylation51N-linked (GlcNAc...) Potential
Disulfide bond97 ↔ 189 By similarity

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Sequences

Sequence LengthMass (Da)Tools
P23265-1 [UniParc].

Last modified November 1, 1991. Version 1.
Checksum: 918AD817099ECCA3

FASTA33337,541
        10         20         30         40         50         60 
MDSSNRTRVS EFLLLGFVEN KDLQPLIYGL FLSMYLVTVI GNISIIVAII SDPCLHTPMY 

        70         80         90        100        110        120 
FFLSNLSFVD ICFISTTVPK MLVNIQTQNN VITYAGCITQ IYFFLLFVEL DNFLLTIMAY 

       130        140        150        160        170        180 
DRYVAICHPM HYTVIMNYKL CGFLVLVSWI VSVLHALFQS LMMLALPFCT HLEIPHYFCE 

       190        200        210        220        230        240 
PNQVIQLTCS DAFLNDLVIY FTLVLLATVP LAGIFYSYFK IVSSICAISS VHGKYKAFST 

       250        260        270        280        290        300 
CASHLSVVSL FYCTGLGVYL SSAANNSSQA SATASVMYTV VTPMVNPFIY SLRNKDVKSV 

       310        320        330 
LKKTLCEEVI RSPPSLLHFF LVLCHLPCFI FCY

« Hide

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References

[1]"A novel multigene family may encode odorant receptors: a molecular basis for odor recognition."
Buck L., Axel R.
Cell 65:175-187(1991) [PubMed: 1840504] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA].

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Cross-references

Sequence databases

M64376 mRNA. Translation: AAA41739.1.
IPIIPI00209146.
PIRA23701.
RefSeqNP_997480.1.
UniGeneRn.120045

3D structure databases

ModBaseSearch...

Protein family/group databases

GPCRDBSearch...

Genome annotation databases

GeneID299593.
KEGGrno:299593.

Organism-specific databases

RGD1333657. Olr1078.

Phylogenomic databases

HOVERGENP23265.

Family and domain databases

InterProIPR000276. 7TM_GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_supfam.
IPR000725. Olfact_rcpt.
[Graphical view]
PANTHERPTHR11398. Olfact_rcpt. 1 hit.
PfamPF00001. 7tm_1. 1 hit.
[Graphical view]
PRINTSPR00237. GPCRRHODOPSN.
PR00245. OLFACTORYR.
PROSITEPS00237. G_PROTEIN_RECEP_F1_1. 1 hit.
PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Other Resources

NextBio645440.

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Entry information

Entry nameO1078_RAT
AccessionPrimary (citable) accession number: P23265
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1991
Last sequence update: November 1, 1991
Last modified: June 16, 2009
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHPI (Human Proteome Initiative)

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Relevant documents

7-transmembrane G-linked receptors

List of 7-transmembrane G-linked receptor entries

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents