Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

P23265 (O1078_RAT) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 86. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Olfactory receptor 1078
Alternative name(s):
Olfactory receptor-like protein F3
Gene names
Name:Olr1078
OrganismRattus norvegicus (Rat) [Reference proteome]
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Protein attributes

Sequence length333 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Function

Odorant receptor Potential.

Subcellular location

Cell membrane; Multi-pass membrane protein.

Tissue specificity

Olfactory epithelium.

Sequence similarities

Belongs to the G-protein coupled receptor 1 family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 333333Olfactory receptor 1078
PRO_0000150872

Regions

Topological domain1 – 2525Extracellular Potential
Transmembrane26 – 5025Helical; Name=1; Potential
Topological domain51 – 577Cytoplasmic Potential
Transmembrane58 – 7922Helical; Name=2; Potential
Topological domain80 – 10021Extracellular Potential
Transmembrane101 – 12020Helical; Name=3; Potential
Topological domain121 – 13919Cytoplasmic Potential
Transmembrane140 – 15819Helical; Name=4; Potential
Topological domain159 – 19638Extracellular Potential
Transmembrane197 – 21923Helical; Name=5; Potential
Topological domain220 – 23617Cytoplasmic Potential
Transmembrane237 – 26024Helical; Name=6; Potential
Topological domain261 – 27212Extracellular Potential
Transmembrane273 – 29220Helical; Name=7; Potential
Topological domain293 – 33341Cytoplasmic Potential

Amino acid modifications

Glycosylation51N-linked (GlcNAc...) Potential
Disulfide bond97 ↔ 189 By similarity

Sequences

Sequence LengthMass (Da)Tools
P23265 [UniParc].

Last modified November 1, 1991. Version 1.
Checksum: 918AD817099ECCA3

FASTA33337,541
        10         20         30         40         50         60 
MDSSNRTRVS EFLLLGFVEN KDLQPLIYGL FLSMYLVTVI GNISIIVAII SDPCLHTPMY 

        70         80         90        100        110        120 
FFLSNLSFVD ICFISTTVPK MLVNIQTQNN VITYAGCITQ IYFFLLFVEL DNFLLTIMAY 

       130        140        150        160        170        180 
DRYVAICHPM HYTVIMNYKL CGFLVLVSWI VSVLHALFQS LMMLALPFCT HLEIPHYFCE 

       190        200        210        220        230        240 
PNQVIQLTCS DAFLNDLVIY FTLVLLATVP LAGIFYSYFK IVSSICAISS VHGKYKAFST 

       250        260        270        280        290        300 
CASHLSVVSL FYCTGLGVYL SSAANNSSQA SATASVMYTV VTPMVNPFIY SLRNKDVKSV 

       310        320        330 
LKKTLCEEVI RSPPSLLHFF LVLCHLPCFI FCY 

« Hide

References

[1]"A novel multigene family may encode odorant receptors: a molecular basis for odor recognition."
Buck L., Axel R.
Cell 65:175-187(1991) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA].
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
M64376 mRNA. Translation: AAA41739.1.
PIRA23701.
RefSeqNP_997480.1. NM_207597.1.
UniGeneRn.120045.

3D structure databases

ProteinModelPortalP23265.
ModBaseSearch...
MobiDBSearch...

Protein family/group databases

GPCRDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID299593.
KEGGrno:299593.
UCSCRGD:1333657. rat.

Organism-specific databases

CTD299593.
RGD1333657. Olr1078.

Phylogenomic databases

HOVERGENHBG017625.
KOK04257.
PhylomeDBP23265.

Gene expression databases

GenevestigatorP23265.

Family and domain databases

Gene3D1.20.1070.10. 1 hit.
InterProIPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
IPR000725. Olfact_rcpt.
[Graphical view]
PRINTSPR00237. GPCRRHODOPSN.
PR00245. OLFACTORYR.
PROSITEPS00237. G_PROTEIN_RECEP_F1_1. 1 hit.
PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio645440.

Entry information

Entry nameO1078_RAT
AccessionPrimary (citable) accession number: P23265
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1991
Last sequence update: November 1, 1991
Last modified: April 16, 2014
This is version 86 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

7-transmembrane G-linked receptors

List of 7-transmembrane G-linked receptor entries