Reviewed,
UniProtKB/Swiss-Prot P23219 (PGH1_HUMAN)
Last modified
January 19, 2010.
Version 125.
History...
Clusters with 100%,
90%,
50% identity |
Documents (6) |
Third-party data |
Customize display | text xml rdf/xml gff fasta |
Names and origin
| Protein names | Recommended name: Prostaglandin G/H synthase 1 EC=1.14.99.1 Alternative name(s): Cyclooxygenase-1 Short name=COX-1 Prostaglandin-endoperoxide synthase 1 Prostaglandin H2 synthase 1 Short name=PGH synthase 1 Short name=PGHS-1 Short name=PHS 1 | ||||
| Gene names |
| ||||
| Organism | Homo sapiens (Human) [Complete proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 599 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Function | May play an important role in regulating or promoting cell proliferation in some normal and neoplastically transformed cells. |
| Catalytic activity | Arachidonate + AH2 + 2 O2 = prostaglandin H2 + A + H2O. |
| Cofactor | Binds 1 heme B (iron-protoporphyrin IX) group per subunit By similarity. |
| Pathway | |
| Subunit structure | Homodimer. |
| Subcellular location | Microsome membrane; Peripheral membrane protein. Endoplasmic reticulum membrane; Peripheral membrane protein. |
| Miscellaneous | This enzyme acts both as a dioxygenase and as a peroxidase. This enzyme is the target of nonsteroidal anti-inflammatory drugs such as aspirin. |
| Sequence similarities | Belongs to the prostaglandin G/H synthase family. Contains 1 EGF-like domain. |
| Sequence caution | The sequence CAI14716.1 differs from that shown. Reason: Erroneous gene model prediction. |
Ontologies
Alternative products
| This entry describes 2 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform Long (identifier: P23219-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform Short (identifier: P23219-2) The sequence of this isoform differs from the canonical sequence as follows: 396-432: Missing. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||||
Molecule processing | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Signal peptide | 1 – 23 | 23 | |||||||||
| Chain | 24 – 599 | 576 | Prostaglandin G/H synthase 1 | PRO_0000023868 | |||||||
Regions | |||||||||||
| Domain | 31 – 69 | 39 | EGF-like | ||||||||
Sites | |||||||||||
| Active site | 206 | 1 | Proton acceptor By similarity | ||||||||
| Active site | 384 | 1 | For cyclooxygenase activity By similarity | ||||||||
| Metal binding | 387 | 1 | Iron (heme axial ligand) By similarity | ||||||||
| Site | 529 | 1 | Aspirin-acetylated serine | ||||||||
Amino acid modifications | |||||||||||
| Glycosylation | 67 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 103 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 143 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Disulfide bond | 35 ↔ 46 | By similarity | |||||||||
| Disulfide bond | 36 ↔ 158 | By similarity | |||||||||
| Disulfide bond | 40 ↔ 56 | By similarity | |||||||||
| Disulfide bond | 58 ↔ 68 | By similarity | |||||||||
| Disulfide bond | 568 ↔ 574 | By similarity | |||||||||
Natural variations | |||||||||||
| Alternative sequence | 396 – 432 | 37 | Missing in isoform Short. | VSP_004673 | |||||||
| Natural variant | 8 | 1 | R → W: dbSNP rs1236913. Ref.5 Ref.6 Ref.8 | VAR_013451 | |||||||
| Natural variant | 17 | 1 | P → L: dbSNP rs3842787. Ref.5 Ref.6 | VAR_013452 | |||||||
| Natural variant | 53 | 1 | R → H: dbSNP rs3842789. Ref.6 | VAR_019161 | |||||||
| Natural variant | 149 | 1 | R → L: dbSNP rs10306140. Ref.6 | VAR_019162 | |||||||
| Natural variant | 185 | 1 | K → T: dbSNP rs3842792. | VAR_056663 | |||||||
| Natural variant | 237 | 1 | L → M: dbSNP rs5789. Ref.6 Ref.11 | VAR_019163 | |||||||
| Natural variant | 341 | 1 | K → R: dbSNP rs3842799. | VAR_056664 | |||||||
| Natural variant | 359 | 1 | K → R: dbSNP rs5791. | VAR_013453 | |||||||
| Natural variant | 443 | 1 | I → V: dbSNP rs5792. | VAR_013454 | |||||||
| Natural variant | 481 | 1 | V → I: dbSNP rs5794. Ref.11 | VAR_028017 | |||||||
Experimental info | |||||||||||
| Mutagenesis | 529 | 1 | S → N: Abolishes cyclooxygenase activity. | ||||||||
| Sequence conflict | 12 | 1 | F → L in AAA36439. Ref.1 | ||||||||
| Sequence conflict | 113 | 1 | R → L in AAA36439. Ref.1 | ||||||||
| Sequence conflict | 378 | 1 | M → T in AAA36439. Ref.1 | ||||||||
Sequences
| ||||||||||||||||||||||||
References
| « Hide 'large scale' references | |
| [1] | "Cloning of human gene encoding prostaglandin endoperoxide synthase and primary structure of the enzyme." Yokoyama C., Tanabe T. Biochem. Biophys. Res. Commun. 165:888-894(1989) [PubMed: 2512924] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. |
| [2] | "Human platelet/erythroleukemia cell prostaglandin G/H synthase: cDNA cloning, expression, and gene chromosomal assignment." Funk C.D., Funk L.B., Kennedy M.E., Pong A.S., Fitzgerald G.A. FASEB J. 5:2304-2312(1991) [PubMed: 1907252] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA]. |
| [3] | "Immunoaffinity purification and cDNA cloning of human platelet prostaglandin endoperoxide synthase (cyclooxygenase)." Takahashi Y., Ueda N., Yoshimoto T., Yamamoto S., Yokoyama C., Miyata A., Tanabe T., Fuse I., Hattori A., Shibata A. Biochem. Biophys. Res. Commun. 182:433-438(1992) [PubMed: 1734857] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA]. Tissue: Platelet. |
| [4] | "Alternative splicing of human prostaglandin G/H synthase mRNA and evidence of differential regulation of the resulting transcripts by transforming growth factor beta 1, interleukin 1 beta, and tumor necrosis factor alpha." Diaz A., Reginato A.M., Jimenez S.A. J. Biol. Chem. 267:10816-10822(1992) [PubMed: 1587858] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA]. Tissue: Lung fibroblast. |
| [5] | "Characterization of the human prostaglandin H synthase 1 gene (PTGS1): exclusion by genetic linkage analysis as a second modifier gene in familial thrombosis." Scott B.T., Hasstedt S.J., Bovill E.G., Callas P.W., Valliere J.E., Wang L.-H., Wu K.K., Long G.L. Blood Coagul. Fibrinolysis 13:519-531(2002) [PubMed: 12192304] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], VARIANTS TRP-8 AND LEU-17. |
| [6] | SeattleSNPs variation discovery resource Submitted (OCT-2003) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], VARIANTS TRP-8; LEU-17; HIS-53; LEU-149 AND MET-237. |
| [7] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed: 14702039] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM LONG). Tissue: Hippocampus. |
| [8] | "DNA sequence and analysis of human chromosome 9." Humphray S.J., Oliver K., Hunt A.R., Plumb R.W., Loveland J.E., Howe K.L., Andrews T.D., Searle S., Hunt S.E., Scott C.E., Jones M.C., Ainscough R., Almeida J.P., Ambrose K.D., Ashwell R.I.S., Babbage A.K., Babbage S., Bagguley C.L. Dunham I.Nature 429:369-374(2004) [PubMed: 15164053] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], VARIANT TRP-8. |
| [9] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [10] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM LONG). Tissue: Brain. |
| [11] | "Arachidonate lipoxygenase (ALOX) and cyclooxygenase (COX) polymorphisms and colon cancer risk." Goodman J.E., Bowman E.D., Chanock S.J., Alberg A.J., Harris C.C. Carcinogenesis 25:2467-2472(2004) [PubMed: 15308583] [Abstract] Cited for: VARIANTS MET-237 AND ILE-481. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | M31822 M31821 Genomic DNA. Translation: AAA36439.1. M59979 mRNA. Translation: AAA03630.1. S78220 mRNA. Translation: AAB21215.1. S36219 mRNA. Translation: AAB22216.1. S36271 mRNA. Translation: AAB22217.1. AF440204 Genomic DNA. Translation: AAL33601.1. AY449688 Genomic DNA. Translation: AAR08907.1. AK290022 mRNA. Translation: BAF82711.1. AL162424, AL359636 Genomic DNA. Translation: CAI14714.1. AL162424, AL359636 Genomic DNA. Translation: CAI14715.1. AL162424 Genomic DNA. Translation: CAI14716.1. Sequence problems. AL359636, AL162424 Genomic DNA. Translation: CAM45740.1. AL359636, AL162424 Genomic DNA. Translation: CAM45741.1. CH471090 Genomic DNA. Translation: EAW87530.1. BC029840 mRNA. Translation: AAH29840.1. |
| IPI | IPI00298267. IPI00298268. |
| PIR | JH0259. |
| RefSeq | NP_000953.2. NP_542158.1. |
| UniGene | Hs.201978 |
3D structure databases | |
| SMR | P23219. Positions 31-583. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | P23219. |
Protein family/group databases | |
| PeroxiBase | 3320. HsPGHS01. |
Proteomic databases | |
| PRIDE | P23219. |
Genome annotation databases | |
| Ensembl | ENST00000362012; ENSP00000354612; ENSG00000095303; Homo sapiens. [Genome view] |
| GeneID | 5742. |
| KEGG | hsa:5742. |
Organism-specific databases | |
| CTD | 5742. |
| GeneCards | GC09P124173. |
| H-InvDB | HIX0008355. |
| HGNC | HGNC:9604. PTGS1. |
| HPA | CAB020315. HPA002834. |
| MIM | 176805. gene. |
| PharmGKB | PA24346. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | prNOG14984. |
| HOVERGEN | P23219. |
| InParanoid | P23219. |
Enzyme and pathway databases | |
| BRENDA | 1.14.99.1. 247. |
| Reactome | REACT_13433. Biological oxidations. REACT_15314. Hormone biosynthesis. REACT_649. Phase 1 functionalization. |
Gene expression databases | |
| ArrayExpress | P23219. |
| Bgee | P23219. |
| CleanEx | HS_PTGS1. |
| Genevestigator | P23219. |
| GermOnline | ENSG00000095303. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR006210. EGF-like. IPR000742. EGF_3. IPR010255. Haem_peroxidase. IPR002007. Haem_peroxidase_animal. IPR019791. Haem_peroxidase_animal_sg. [Graphical view] |
| Gene3D | G3DSA:1.10.640.10. Haem_peroxidase_animal. 1 hit. |
| Pfam | PF03098. An_peroxidase. 2 hits. [Graphical view] |
| PRINTS | PR00457. ANPEROXIDASE. |
| SMART | SM00181. EGF. 1 hit. [Graphical view] |
| PROSITE | PS00022. EGF_1. False negative. PS01186. EGF_2. False negative. PS50026. EGF_3. 1 hit. PS50292. PEROXIDASE_3. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other Resources | |
| DrugBank | DB00316. Acetaminophen. DB00945. Aspirin. DB01014. Balsalazide. DB00963. Bromfenac. DB01188. Ciclopirox. DB00586. Diclofenac. DB00861. Diflunisal. DB04817. Dipyrone. DB00749. Etodolac. DB00573. Fenoprofen. DB00712. Flurbiprofen. DB00154. gamma-Homolinolenic acid. DB01050. Ibuprofen. DB00159. Icosapent. DB00328. Indomethacin. DB01009. Ketoprofen. DB00465. Ketorolac. DB01283. Lumiracoxib. DB00939. Meclofenamic acid. DB00784. Mefenamic acid. DB00244. Mesalazine. DB00350. Minoxidil. DB00461. Nabumetone. DB00788. Naproxen. DB03783. Phenacetin. DB00554. Piroxicam. DB00533. Rofecoxib. DB00936. Salicyclic acid. DB01399. Salsalate. DB00605. Sulindac. DB00870. Suprofen. DB00469. Tenoxicam. DB00500. Tolmetin. |
| NextBio | 22352. |
| SOURCE | Search... |
Entry information
| Entry name | PGH1_HUMAN | ||||||||
| Accession | Primary (citable) accession number: P23219 Secondary accession number(s): A8K1V7 Q5T7T8 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HPI (Human Proteome Initiative) | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 9 Human chromosome 9: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

Clusters with


