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Protein

Uncharacterized protein p6

Gene

ORF3

Organism
Tobacco necrosis virus (strain A) (TNV-A)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein p6
Gene namesi
ORF Names:ORF3
OrganismiTobacco necrosis virus (strain A) (TNV-A)
Taxonomic identifieri12055 [NCBI]
Taxonomic lineageiVirusesssRNA positive-strand viruses, no DNA stageTombusviridaeAlphanecrovirus
Virus hostiChenopodium amaranticolor [TaxID: 66262]
Chenopodium quinoa (Quinoa) [TaxID: 63459]
Cucumis sativus (Cucumber) [TaxID: 3659]
Nicotiana clevelandii (Wild tobacco) [TaxID: 81866]
Nicotiana tabacum (Common tobacco) [TaxID: 4097]
Phaseolus vulgaris (Kidney bean) (French bean) [TaxID: 3885]
Tulipa gesneriana (Garden tulip) [TaxID: 13306]
ProteomesiUP000000575 Componenti: Genome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei12 – 3221HelicalSequence AnalysisAdd
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 5656Uncharacterized protein p6PRO_0000222902Add
BLAST

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni19 – 3113HydrophobicAdd
BLAST

Keywords - Domaini

Transmembrane, Transmembrane helix

Sequencei

Sequence statusi: Complete.

P22961-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAACRCCDTS PGITLFPYFA ILILILAILV VGTPNQQYHH SPSTYEYKTQ

HISIAK
Length:56
Mass (Da):6,240
Last modified:July 31, 1991 - v1
Checksum:i139AB2EAFA77A9D3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M33002 Genomic RNA. Translation: AAA86436.1.
PIRiC35523.
RefSeqiNP_056827.1. NC_001777.1.

Genome annotation databases

GeneIDi1493903.
KEGGivg:1493903.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M33002 Genomic RNA. Translation: AAA86436.1.
PIRiC35523.
RefSeqiNP_056827.1. NC_001777.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi1493903.
KEGGivg:1493903.

Family and domain databases

ProtoNetiSearch...

Publicationsi

  1. "Genome structure of tobacco necrosis virus strain A."
    Meulewaeter F., Seurinck J., van Emmelo J.
    Virology 177:699-709(1989) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Entry informationi

Entry nameiP6_TNVA
AccessioniPrimary (citable) accession number: P22961
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 31, 1991
Last sequence update: July 31, 1991
Last modified: March 31, 2015
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.