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P22882 (17KD_RICTY) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 76. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
17 kDa surface antigen
Gene names
Name:omp
Ordered Locus Names:RT0821
OrganismRickettsia typhi (strain ATCC VR-144 / Wilmington) [Complete proteome] [HAMAP]
Taxonomic identifier257363 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiatyphus group

Protein attributes

Sequence length159 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Subcellular location

Cell outer membrane; Lipid-anchor Probable.

Sequence similarities

Belongs to the rickettsiale 17 kDa surface antigen family.

Ontologies

Keywords
   Cellular componentCell outer membrane
Membrane
   DomainSignal
   PTMLipoprotein
Palmitate
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular_componentcell outer membrane

Inferred from electronic annotation. Source: UniProtKB-SubCell

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 1919 By similarity
Chain20 – 15914017 kDa surface antigen
PRO_0000018023

Amino acid modifications

Lipidation201N-palmitoyl cysteine Probable
Lipidation201S-diacylglycerol cysteine Probable

Experimental info

Sequence conflict751M → L in AAA26377. Ref.1
Sequence conflict1581A → V in AAA26377. Ref.1

Sequences

Sequence LengthMass (Da)Tools
P22882 [UniParc].

Last modified November 9, 2004. Version 2.
Checksum: A9893F26492727A9

FASTA15916,539
        10         20         30         40         50         60 
MKLLSKVMIL ALAASMLQAC NGPGGMNKQG TGTLLGGAGG ALLGSQFGHG KGQLVGVGVG 

        70         80         90        100        110        120 
ALLGAVLGGQ IGASMDEQDR KLLELTSQRA LESAPSGSNI EWRNPDNGNH GYVTPNKTYR 

       130        140        150 
NSTGQYCREY TQTVVIGGKQ QTTYGNACRQ PDGQWQVAN 

« Hide

References

« Hide 'large scale' references
[1]"Comparative sequence analysis of a genus-common rickettsial antigen gene."
Anderson B.E., Tzianabos T.
J. Bacteriol. 171:5199-5201(1989) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]"Complete genome sequence of Rickettsia typhi and comparison with sequences of other Rickettsiae."
McLeod M.P., Qin X., Karpathy S.E., Gioia J., Highlander S.K., Fox G.E., McNeill T.Z., Jiang H., Muzny D., Jacob L.S., Hawes A.C., Sodergren E., Gill R., Hume J., Morgan M., Fan G., Amin A.G., Gibbs R.A. expand/collapse author list , Hong C., Yu X.-J., Walker D.H., Weinstock G.M.
J. Bacteriol. 186:5842-5855(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC VR-144 / Wilmington.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
M28481 Genomic DNA. Translation: AAA26377.1.
AE017197 Genomic DNA. Translation: AAU04276.1.
PIRC33971.
RefSeqYP_067758.1. NC_006142.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING257363.RT0821.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAU04276; AAU04276; RT0821.
GeneID2958967.
KEGGrty:RT0821.
PATRIC17910892. VBIRicTyp34752_0838.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG4520.
HOGENOMHOG000285721.
OMAIGNEMDK.
OrthoDBEOG65N1H5.

Enzyme and pathway databases

BioCycRTYP257363:GJEQ-861-MONOMER.

Family and domain databases

InterProIPR008816. Gly_zipper_2TM_dom.
IPR016364. Surface_antigen_Rickettsia.
[Graphical view]
PfamPF05433. Rick_17kDa_Anti. 1 hit.
[Graphical view]
PIRSFPIRSF002721. Surface_antigen_Rickettsia. 1 hit.
PROSITEPS51257. PROKAR_LIPOPROTEIN. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry name17KD_RICTY
AccessionPrimary (citable) accession number: P22882
Secondary accession number(s): Q68Y14
Entry history
Integrated into UniProtKB/Swiss-Prot: August 1, 1991
Last sequence update: November 9, 2004
Last modified: May 14, 2014
This is version 76 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Rickettsia typhi

Rickettsia typhi (strain Wilmington): entries and gene names