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Protein

Uncharacterized protein YifB

Gene

yifB

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  • ATP-dependent peptidase activity Source: EcoCyc
Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:EG11260-MONOMER.
ECOL316407:JW3738-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YifB
Gene namesi
Name:yifB
Ordered Locus Names:b3765, JW3738
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11260. yifB.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 506506Uncharacterized protein YifBPRO_0000206877Add
BLAST

Proteomic databases

PaxDbiP22787.
PRIDEiP22787.

Interactioni

Protein-protein interaction databases

BioGridi4263148. 10 interactions.
IntActiP22787. 7 interactions.
STRINGi511145.b3765.

Structurei

3D structure databases

ProteinModelPortaliP22787.
SMRiP22787. Positions 190-499.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiENOG4105C0P. Bacteria.
COG0606. LUCA.
HOGENOMiHOG000246698.
InParanoidiP22787.
KOiK07391.
OMAiPCPCGYF.
PhylomeDBiP22787.

Family and domain databases

Gene3Di3.30.230.10. 1 hit.
3.40.50.300. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR004482. Mg_chelat-rel.
IPR025158. Mg_chelat-rel_C.
IPR000523. Mg_chelatse_chII_dom.
IPR027417. P-loop_NTPase.
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
[Graphical view]
PANTHERiPTHR32039:SF7. PTHR32039:SF7. 1 hit.
PfamiPF01078. Mg_chelatase. 1 hit.
PF13335. Mg_chelatase_C. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
SSF54211. SSF54211. 1 hit.
TIGRFAMsiTIGR00368. TIGR00368. 1 hit.

Sequencei

Sequence statusi: Complete.

P22787-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLSIVHTRA ALGVNAPPIT VEVHISKGLP GLTMVGLPET TVKEARDRVR
60 70 80 90 100
SAIINSGYEY PAKKITINLA PADLPKEGGR YDLPIAIALL AASEQLTANK
110 120 130 140 150
LDEYELVGEL ALTGALRGVP GAISSATEAI KSGRKIIVAK DNEDEVGLIN
160 170 180 190 200
GEGCLIADHL QAVCAFLEGK HALERPKPTD AVSRALQHDL SDVIGQEQGK
210 220 230 240 250
RGLEITAAGG HNLLLIGPPG TGKTMLASRI NGLLPDLSNE EALESAAILS
260 270 280 290 300
LVNAESVQKQ WRQRPFRSPH HSASLTAMVG GGAIPGPGEI SLAHNGVLFL
310 320 330 340 350
DELPEFERRT LDALREPIES GQIHLSRTRA KITYPARFQL VAAMNPSPTG
360 370 380 390 400
HYQGNHNRCT PEQTLRYLNR LSGPFLDRFD LSLEIPLPPP GILSKTVVPG
410 420 430 440 450
ESSATVKQRV MAARERQFKR QNKLNAWLDS PEIRQFCKLE SEDAMWLEGT
460 470 480 490 500
LIHLGLSIRA WQRLLKVART IADIDQSDII TRQHLQEAVS YRAIDRLLIH

LQKLLT
Length:506
Mass (Da):55,146
Last modified:July 10, 2007 - v2
Checksum:iFAF38C5A313C3159
GO

Sequence cautioni

The sequence AAA24609 differs from that shown. Reason: Erroneous initiation. Curated
The sequence AAA24610 differs from that shown. Reason: Erroneous initiation. Curated
The sequence AAA67569 differs from that shown. Reason: Erroneous initiation. Curated
The sequence BAE77530 differs from that shown. Reason: Erroneous initiation. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M37337 Genomic DNA. Translation: AAA24609.1. Different initiation.
M37337 Genomic DNA. Translation: AAA24610.1. Different initiation.
M87049 Genomic DNA. Translation: AAA67569.1. Different initiation.
U00096 Genomic DNA. Translation: AAC77486.2.
AP009048 Genomic DNA. Translation: BAE77530.1. Different initiation.
PIRiJQ0872.
RefSeqiNP_418214.2. NC_000913.3.
WP_000058964.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC77486; AAC77486; b3765.
BAE77530; BAE77530; BAE77530.
GeneIDi948282.
KEGGiecj:JW3738.
eco:b3765.
PATRICi32123027. VBIEscCol129921_3883.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M37337 Genomic DNA. Translation: AAA24609.1. Different initiation.
M37337 Genomic DNA. Translation: AAA24610.1. Different initiation.
M87049 Genomic DNA. Translation: AAA67569.1. Different initiation.
U00096 Genomic DNA. Translation: AAC77486.2.
AP009048 Genomic DNA. Translation: BAE77530.1. Different initiation.
PIRiJQ0872.
RefSeqiNP_418214.2. NC_000913.3.
WP_000058964.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP22787.
SMRiP22787. Positions 190-499.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4263148. 10 interactions.
IntActiP22787. 7 interactions.
STRINGi511145.b3765.

Proteomic databases

PaxDbiP22787.
PRIDEiP22787.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC77486; AAC77486; b3765.
BAE77530; BAE77530; BAE77530.
GeneIDi948282.
KEGGiecj:JW3738.
eco:b3765.
PATRICi32123027. VBIEscCol129921_3883.

Organism-specific databases

EchoBASEiEB1240.
EcoGeneiEG11260. yifB.

Phylogenomic databases

eggNOGiENOG4105C0P. Bacteria.
COG0606. LUCA.
HOGENOMiHOG000246698.
InParanoidiP22787.
KOiK07391.
OMAiPCPCGYF.
PhylomeDBiP22787.

Enzyme and pathway databases

BioCyciEcoCyc:EG11260-MONOMER.
ECOL316407:JW3738-MONOMER.

Miscellaneous databases

PROiP22787.

Family and domain databases

Gene3Di3.30.230.10. 1 hit.
3.40.50.300. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR004482. Mg_chelat-rel.
IPR025158. Mg_chelat-rel_C.
IPR000523. Mg_chelatse_chII_dom.
IPR027417. P-loop_NTPase.
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
[Graphical view]
PANTHERiPTHR32039:SF7. PTHR32039:SF7. 1 hit.
PfamiPF01078. Mg_chelatase. 1 hit.
PF13335. Mg_chelatase_C. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
SSF54211. SSF54211. 1 hit.
TIGRFAMsiTIGR00368. TIGR00368. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiYIFB_ECOLI
AccessioniPrimary (citable) accession number: P22787
Secondary accession number(s): Q2M876
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 1, 1991
Last sequence update: July 10, 2007
Last modified: September 7, 2016
This is version 125 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.