Skip Header

 
Contribute Send feedback
Read comments (0) or add your own

Reviewed, UniProtKB/Swiss-Prot P22698 (SPG7_DICDI)

Last modified June 16, 2009. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Spore germination protein 270-11
Gene names
Name: celB
Synonyms: gerE
ORF Names: DDB_G0269112
OrganismDictyostelium discoideum (Slime mold) [Complete proteome]
Taxonomic identifier44689 [NCBI]
Taxonomic lineageEukaryotaAmoebozoaMycetozoaDictyosteliidaDictyostelium

Protein attributes

Sequence length532 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

General annotation (Comments)

Developmental stage

Found predominantly during early stages of spore germination.

Domain

A shared internal Thr-Glu-Thr-Pro repeat defines a family of D.discoideum spore germination specific proteins.

Ontologies

Keywords
   Biological processSporulation
   DomainRepeat
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processsporulation resulting in formation of a cellular spore

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular componentextracellular region

Inferred from electronic annotation. Source: InterPro

   Molecular functioncarbohydrate binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 532532Spore germination protein 270-11
PRO_0000072122

Regions

Repeat339 – 34241-1
Repeat343 – 34641-2
Repeat347 – 35041-3
Repeat351 – 35441-4
Repeat355 – 35841-5
Repeat359 – 36241-6
Repeat363 – 36641-7
Repeat367 – 37041-8
Repeat371 – 37441-9
Repeat375 – 37841-10
Repeat397 – 40042-1
Repeat401 – 40442-2
Repeat405 – 40842-3
Region339 – 3784010 X 4 AA tandem repeats of T-[EP]-T-[EP]
Region397 – 408123 X 4 AA tandem repeats of T-[EP]-T-[PD]

Sequences

Sequence LengthMass (Da)Tools
P22698-1 [UniParc].

Last modified August 1, 1991. Version 1.
Checksum: 70EFA31D11AFC6EE

FASTA53255,208
        10         20         30         40         50         60 
MKNIYSLFLL FALISATFAN NAFIVHWNSD SISKKLTGQI GDTISFYTSD GNSHDVKSSD 

        70         80         90        100        110        120 
GSVSSSVFSG SLTNPGIFKV TLTKEGNIEF TSSYDEGLSA TIVVSSGGQI PITTTSSTTT 

       130        140        150        160        170        180 
DGSSTPSTPT STTSASTTTS GGSATTTTGE PITDGSNGGA SSTTGNSGTT GSATTTTSSS 

       190        200        210        220        230        240 
SDNSDGSVGT STTTSPAITT SSGSIIDPTS PPTTDSSSNS GGYGSSSSIE NGVECLLTIT 

       250        260        270        280        290        300 
QDAFDSWTYD NIIYTVYQVN LTNIGTLSVE SVILTPNDNS LIYHTWELVY DGTSLTLPTY 

       310        320        330        340        350        360 
RKAGPINPEE TIIFGYISRN STDVTFALSP TCSDSSSPTP TPTETPTETP TETPTETPTE 

       370        380        390        400        410        420 
TPTETPTETP TETETPTPTP SSSSSDVDSG SSSEIETPTP TETDTPTPTP SSSSSEGSGS 

       430        440        450        460        470        480 
SSETQPPITP PPTTGTSCLA QVQQKVINSW INGEVDHYIQ VEATIVNQGS TPISSFNFYS 

       490        500        510        520        530 
DAEQIWSVEK TGTNTYKLPS WFSTIPVGGS HTFGYIVKSA ELSDLEGVQY TC 

« Hide

References

« Hide 'large scale' references
[1]"A shared internal threonine-glutamic acid-threonine-proline repeat defines a family of Dictyostelium discoideum spore germination specific proteins."
Giorda R., Ohmachi T., Shaw D.R., Ennis H.L.
Biochemistry 29:7264-7269(1990) [PubMed: 1976383] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]"The genome of the social amoeba Dictyostelium discoideum."
Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., Sucgang R., Berriman M., Song J., Olsen R., Szafranski K., Xu Q., Tunggal B., Kummerfeld S., Madera M., Konfortov B.A., Rivero F., Bankier A.T., Lehmann R., Hamlin N. expand/collapse author list , Davies R., Gaudet P., Fey P., Pilcher K., Chen G., Saunders D., Sodergren E.J., Davis P., Kerhornou A., Nie X., Hall N., Anjard C., Hemphill L., Bason N., Farbrother P., Desany B., Just E., Morio T., Rost R., Churcher C.M., Cooper J., Haydock S., van Driessche N., Cronin A., Goodhead I., Muzny D.M., Mourier T., Pain A., Lu M., Harper D., Lindsay R., Hauser H., James K.D., Quiles M., Madan Babu M., Saito T., Buchrieser C., Wardroper A., Felder M., Thangavelu M., Johnson D., Knights A., Loulseged H., Mungall K.L., Oliver K., Price C., Quail M.A., Urushihara H., Hernandez J., Rabbinowitsch E., Steffen D., Sanders M., Ma J., Kohara Y., Sharp S., Simmonds M.N., Spiegler S., Tivey A., Sugano S., White B., Walker D., Woodward J.R., Winckler T., Tanaka Y., Shaulsky G., Schleicher M., Weinstock G.M., Rosenthal A., Cox E.C., Chisholm R.L., Gibbs R.A., Loomis W.F., Platzer M., Kay R.R., Williams J.G., Dear P.H., Noegel A.A., Barrell B.G., Kuspa A.
Nature 435:43-57(2005) [PubMed: 15875012] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: AX4.
+Additional computationally mapped references.

Cross-references

Sequence databases

M33862 Genomic DNA. Translation: AAA73632.1.
AAFI02000005 Genomic DNA. Translation: EAL71905.1.
PIRB35621.
RefSeqXP_646125.1.

3D structure databases

ModBaseSearch...

Protein family/group databases

CAZyCBM49. Carbohydrate-Binding Module Family 49.

Genome annotation databases

GeneID3397723.
KEGGddi:DDB_0191122.

Organism-specific databases

dictyBaseDDB_G0269112. celB.

Family and domain databases

InterProIPR019028. CBM_49.
[Graphical view]
PfamPF09478. CBM49. 2 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameSPG7_DICDI
AccessionPrimary (citable) accession number: P22698
Secondary accession number(s): Q55DK6
Entry history
Integrated into UniProtKB/Swiss-Prot: August 1, 1991
Last sequence update: August 1, 1991
Last modified: June 16, 2009
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)

Relevant documents

Dictyostelium discoideum

Dictyostelium discoideum: entries, gene names and cross-references to dictyBase

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents