P22645 (YDH1_XANAU) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names	Recommended name: Uncharacterized HTH-type transcriptional regulator in dhlA 5'region
Organism	Xanthobacter autotrophicus
Taxonomic identifier	280 [NCBI]
Taxonomic lineage	cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Xanthobacteraceae › Xanthobacter

Protein attributes

Sequence length	202 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH tetR-type DNA-binding domain.

Ontologies

Keywords
Biological process	Transcription Transcription regulation
Ligand	DNA-binding
Gene Ontology (GO)
Biological_process	regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 202	202	Uncharacterized HTH-type transcriptional regulator in dhlA 5'region		PRO_0000070674
Regions
	Domain	14 – 74	61	HTH tetR-type

Sequences

	Sequence		Length	Mass (Da)
	P22645 [UniParc]. Last modified August 1, 1991. Version 1. Checksum: 49F13BFD5681167A	FASTA	202	22,763
	10 20 30 40 50 60 MSTFFEPENG MKQNAKTERI LDVALELLET EGEFGLTMRQ VATQADMSLS NVQYYFKSED 70 80 90 100 110 120 LLLVAMADRY FQRCLTTMAE HPPLSAGRDQ HAQLRALLRE LLGHGLEISE MCRIFREYWA 130 140 150 160 170 180 IATRNETVHG YLKSYYRDLA EVMAEKLAPL ASSEKALAVA VSLVIPYVEG YSVTAIAMPE 190 200 SIDTISETLT NVVLEQLRIS NS

References

[1]

"Cloning of 1,2-dichloroethane degradation genes of Xanthobacter autotrophicus GJ10 and expression and sequencing of the dhlA gene." Janssen D.B., Pries F., van der Ploeg J., Kazemier B., Terpstra P., Witholt B. J. Bacteriol. 171:6791-6799(1989) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: GJ10.

Cross-references

Sequence databases
EMBL GenBank DDBJ	M26950 Genomic DNA. Translation: AAA88690.1.
PIR	A43718.
3D structure databases
ProteinModelPortal	P22645.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Family and domain databases
Gene3D	1.10.357.10. 1 hit.
InterPro	IPR009057. Homeodomain-like. IPR001647. HTH_TetR. IPR015893. Tet_transcr_reg_TetR-like_C. IPR011075. Tet_transcr_reg_TetR-rel_C. [Graphical view]
Pfam	PF00440. TetR_N. 1 hit. [Graphical view]
SUPFAM	SSF46689. Homeodomain_like. 1 hit. SSF48498. TetR_like_C. 1 hit.
PROSITE	PS01081. HTH_TETR_1. False negative. PS50977. HTH_TETR_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

YDH1_XANAU

Accession

Primary (citable) accession number: P22645

Entry history

Integrated into UniProtKB/Swiss-Prot:	August 1, 1991
Last sequence update:	August 1, 1991
Last modified:	April 3, 2013
This is version 57 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program