P21817 (RYR1_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 142.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Ryanodine receptor 1 Short name=RYR-1 Short name=RyR1 Alternative name(s): Skeletal muscle calcium release channel Skeletal muscle-type ryanodine receptor | ||||
| Gene names |
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| Organism | Homo sapiens (Human) | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 5038 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Communication between transverse-tubules and sarcoplasmic reticulum. Contraction of skeletal muscle is triggered by release of calcium ions from SR following depolarization of T-tubules. |
| Subunit structure | Homotetramer Potential. |
| Subcellular location | Membrane; Multi-pass membrane protein Probable. |
| Tissue specificity | Skeletal muscle and brain (cerebellum and hippocampus). Ref.10 |
| Involvement in disease | Defects in RYR1 are the cause of malignant hyperthermia susceptibility type 1 (MHS1) [MIM:145600]. MH is an autosomal dominant pharmacogenetic disorder of skeletal muscle and is one of the main causes of death due to anesthesia. In susceptible people, an MH episode can be triggered by all commonly used inhalational anesthetics such as halothane and by depolarizing muscle relaxants such as succinylcholine. The clinical features of the myopathy are hyperthermia, accelerated muscle metabolism, contractures, metabolic acidosis, tachycardia and death, if not treated with the postsynaptic muscle relaxant, dantrolene. Susceptibility to MH can be determined with the 'in vitro' contracture test (IVCT): observing the magnitude of contractures induced in strips of muscle tissue by caffeine alone and halothane alone. Patients with normal response are MH normal (MHN), those with abnormal response to caffeine alone or halothane alone are MH equivocal (MHE(C) and MHE(H) respectively). Ref.2 Ref.7 Ref.8 Ref.15 Ref.16 Ref.17 Ref.18 Ref.19 Ref.20 Ref.21 Ref.22 Ref.23 Ref.24 Ref.26 Ref.27 Ref.28 Ref.30 Ref.31 Ref.34 Ref.35 Ref.36 Ref.37 Ref.39 Ref.40 Ref.41 Ref.42 Ref.44 Ref.47 Ref.50 Ref.51 Ref.52 Ref.53 Ref.54 Ref.55 Ref.59 Defects in RYR1 are a cause of central core disease of muscle (CCD) [MIM:117000]. CCD is an autosomal dominant congenital myopathy, but a severe autosomal recessive form also exists. Both clinical and histological variability is observed. Affected individuals typically display hypotonia and proximal muscle weakness in infancy, leading to the delay of motor milestones. The clinical course of the disorder is usually slow or nonprogressive in adulthood, and the severity of the symptoms may vary from normal to significant muscle weakness. Microscopic examination of CCD-affected skeletal muscle reveals a predominance of type I fibers containing amorphous-looking areas (cores) that do not stain with oxidative and phosphorylase histochemical techniques. Ref.3 Ref.13 Ref.14 Ref.21 Ref.24 Ref.25 Ref.29 Ref.32 Ref.33 Ref.38 Ref.43 Ref.45 Ref.46 Ref.48 Ref.50 Ref.53 Ref.57 Ref.58 Defects in RYR1 are the cause of multiminicore disease with external ophthalmoplegia (MMDO) [MIM:255320]; also known as multicore myopathy with external ophthalmoplegia or minicore myopathy with external ophthalmoplegia. MMD is a clinically heterogeneous neuromuscular disorder. General features include neonatal hypotonia, delayed motor development, and generalized muscle weakness and amyotrophy, which may progress slowly or remain stable. Muscle biopsy shows multiple, poorly circumscribed, short areas of sarcomere disorganization and mitochondria depletion (areas termed minicores) in most muscle fibers. Typically, no dystrophic signs, such as muscle fiber necrosis or regeneration or significant endomysial fibrosis, are present in multiminicore disease. Ref.49 Ref.50 Ref.56 Defects in RYR1 are a cause of congenital myopathy with fiber-type disproportion (CFTD) [MIM:255310]; also known as congenital fiber-type disproportion myopathy (CFTDM). CFTD is a genetically heterogeneous disorder in which there is relative hypotrophy of type 1 muscle fibers compared to type 2 fibers on skeletal muscle biopsy. However, these findings are not specific and can be found in many different myopathic and neuropathic conditions. Ref.50 Ref.60 |
| Miscellaneous | The calcium release channel is modulated by calcium ions, magnesium ions, ATP and calmodulin. The calcium release channel activity resides in the C-terminal region while the remaining part of the protein constitutes the 'foot' structure spanning the junctional gap between the SR and the T-tubule. It is possible that the foot structure interacts with the cytoplasmic region of the dihydropyridine receptor. Ryanodine is an alkaloid that binds to the Ca-release channel in junctional SR and modulates its activity. Coexpression of normal and mutant Thr-4898 RYR1 in a 1:1 ratio, produces RYR1 channels with normal halothane and caffeine sensitivities, but maximal levels of Ca2+ release are reduced by 67%. Binding of [3H]ryanodine indicates that the heterozygous channel is activated by Ca2+ concentrations 4-fold lower than normal. Single-cell analysis of cotransfected cells shows a significantly increased resting cytoplasmic Ca2+ level and a significantly reduced luminal Ca2+ level. These data indicated a leaky channel, possibly caused by a reduction in the Ca2+ concentration required for channel activation. Comparison with 2 other coexpressed mutant/normal channels suggests that the Thr-4898 mutation produces one of the most abnormal RYR1 channels that has been investigated, and this level of abnormality is reflected in the severe and penetrant phenotype of affected CCD individuals. |
| Sequence similarities | Belongs to the ryanodine receptor (TC 1.A.3.1) family. RYR1 subfamily. [View classification] Contains 3 B30.2/SPRY domains. Contains 5 MIR domains. |
Ontologies
Alternative products
| This entry describes 3 isoforms produced by alternative splicing. [Align] [Select] Note: Experimental confirmation may be lacking for some isoforms. | ||||||
| Isoform 1 (identifier: P21817-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: P21817-2) The sequence of this isoform differs from the canonical sequence as follows: 3481-3485: Missing. | ||||||
| Isoform 3 (identifier: P21817-3) The sequence of this isoform differs from the canonical sequence as follows: 3865-3869: Missing. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 5038 | 5038 | Ryanodine receptor 1 | PRO_0000219358 | |||||
Regions | |||||||||
| Topological domain | 1 – 3123 | 3123 | Cytoplasmic | ||||||
| Transmembrane | 3124 – 3144 | 21 | Helical; Name=M'; Potential | ||||||
| Transmembrane | 3188 – 3206 | 19 | Helical; Name=M''; Potential | ||||||
| Transmembrane | 3984 – 4003 | 20 | Helical; Name=M1; Potential | ||||||
| Transmembrane | 4022 – 4040 | 19 | Helical; Name=M2; Potential | ||||||
| Transmembrane | 4278 – 4301 | 24 | Helical; Name=M3; Potential | ||||||
| Transmembrane | 4343 – 4363 | 21 | Helical; Name=M4; Potential | ||||||
| Transmembrane | 4560 – 4581 | 22 | Helical; Name=M5; Potential | ||||||
| Transmembrane | 4649 – 4672 | 24 | Helical; Name=M6; Potential | ||||||
| Transmembrane | 4790 – 4810 | 21 | Helical; Name=M7; Potential | ||||||
| Transmembrane | 4838 – 4857 | 20 | Helical; Name=M8; Potential | ||||||
| Transmembrane | 4880 – 4899 | 20 | Helical; Name=M9; Potential | ||||||
| Transmembrane | 4924 – 4938 | 15 | Helical; Name=M10; Potential | ||||||
| Domain | 97 – 152 | 56 | MIR 1 | ||||||
| Domain | 159 – 204 | 46 | MIR 2 | ||||||
| Domain | 210 – 264 | 55 | MIR 3 | ||||||
| Domain | 270 – 327 | 58 | MIR 4 | ||||||
| Domain | 335 – 392 | 58 | MIR 5 | ||||||
| Domain | 581 – 797 | 217 | B30.2/SPRY 1 | ||||||
| Repeat | 841 – 954 | 114 | 1 | ||||||
| Repeat | 955 – 1068 | 114 | 2 | ||||||
| Domain | 1013 – 1208 | 196 | B30.2/SPRY 2 | ||||||
| Repeat | 1344 – 1359 | 16 | 3; truncated | ||||||
| Domain | 1356 – 1570 | 215 | B30.2/SPRY 3 | ||||||
| Repeat | 1372 – 1387 | 16 | 4; truncated | ||||||
| Repeat | 2726 – 2845 | 120 | 5 | ||||||
| Repeat | 2846 – 2959 | 114 | 6 | ||||||
| Region | 841 – 2959 | 2119 | 6 X approximate repeats | ||||||
| Compositional bias | 1873 – 1924 | 52 | Glu-rich (acidic) | ||||||
| Compositional bias | 4462 – 4532 | 71 | Pro-rich | ||||||
Amino acid modifications | |||||||||
| Modified residue | 2843 | 1 | Phosphoserine; by PKA and PKG By similarity | ||||||
| Modified residue | 3635 | 1 | S-nitrosocysteine Ref.11 | ||||||
| Modified residue | 3951 | 1 | Phosphoserine Potential | ||||||
| Modified residue | 4324 | 1 | Phosphothreonine Potential | ||||||
| Modified residue | 4864 | 1 | Phosphotyrosine Ref.12 | ||||||
| Modified residue | 4867 | 1 | Phosphoserine Ref.12 | ||||||
| Glycosylation | 3466 | 1 | N-linked (GlcNAc...) Potential | ||||||
| Glycosylation | 3474 | 1 | N-linked (GlcNAc...) Potential | ||||||
| Glycosylation | 3908 | 1 | N-linked (GlcNAc...) Potential | ||||||
| Glycosylation | 3949 | 1 | N-linked (GlcNAc...) Potential | ||||||
| Glycosylation | 4148 | 1 | N-linked (GlcNAc...) Potential | ||||||
| Glycosylation | 4865 | 1 | N-linked (GlcNAc...) Potential | ||||||
Natural variations | |||||||||
| Alternative sequence | 3481 – 3485 | 5 | Missing in isoform 2. | VSP_005951 | |||||
| Alternative sequence | 3865 – 3869 | 5 | Missing in isoform 3. | VSP_005952 | |||||
| Natural variant | 13 | 1 | L → R in MHS1. Ref.59 | VAR_058560 | |||||
| Natural variant | 13 | 1 | L → V in CCD; autosomal recessive form. Ref.58 | VAR_045694 | |||||
| Natural variant | 35 | 1 | C → R in MHS1. Ref.18 Ref.55 | VAR_005589 | |||||
| Natural variant | 44 | 1 | R → C in CCD and MHS1. Ref.47 | VAR_045695 | |||||
| Natural variant | 109 | 1 | R → W in MMDO. Ref.56 | VAR_032910 | |||||
| Natural variant | 160 | 1 | E → G in CCD. Ref.53 | VAR_045696 | |||||
| Natural variant | 163 | 1 | R → C in CCD and MHS1; 2-3% of the cases. Ref.13 Ref.31 Ref.36 Ref.37 Ref.40 Ref.51 Ref.55 | VAR_005590 | |||||
| Natural variant | 163 | 1 | R → L in MHS1; induces an increase sensitivity to caffeine. Ref.55 | VAR_045697 | |||||
| Natural variant | 165 | 1 | G → R in MHS1. Ref.55 | VAR_045698 | |||||
| Natural variant | 166 | 1 | D → N in MHS1. Ref.36 Ref.55 | VAR_045699 | |||||
| Natural variant | 177 | 1 | R → C in MHS1. Ref.55 | VAR_045700 | |||||
| Natural variant | 178 | 1 | Y → C in MHS1. Ref.55 | VAR_045701 | |||||
| Natural variant | 215 | 1 | G → E in CCD; autosomal recessive form. Ref.46 | VAR_045702 | |||||
| Natural variant | 226 | 1 | M → K in MHS1. Ref.59 | VAR_058561 | |||||
| Natural variant | 227 | 1 | D → V in MHS1. Ref.55 | VAR_045703 | |||||
| Natural variant | 248 | 1 | G → R in MHS1; could be a polymorphism. Ref.2 Ref.31 Ref.51 Ref.55 Corresponds to variant rs1801086 [ dbSNP | Ensembl ]. | VAR_005591 | |||||
| Natural variant | 291 | 1 | A → T. Corresponds to variant rs2229140 [ dbSNP | Ensembl ]. | VAR_051890 | |||||
| Natural variant | 328 | 1 | R → W in MHS1; has increased sensitivity to both caffeine and halothane. Ref.44 Ref.55 | VAR_045704 | |||||
| Natural variant | 341 | 1 | G → R in MHS1; 10% of the cases. Ref.15 Ref.36 Ref.37 Ref.55 Corresponds to variant rs28933997 [ dbSNP | Ensembl ]. | VAR_005592 | |||||
| Natural variant | 367 | 1 | R → L in MHS1. Ref.59 | VAR_058562 | |||||
| Natural variant | 401 | 1 | R → C in MHS1. Ref.39 Ref.40 | VAR_045705 | |||||
| Natural variant | 401 | 1 | R → H in MHS1. Ref.36 Ref.55 | VAR_045706 | |||||
| Natural variant | 401 | 1 | R → S in MHS1. Ref.55 | VAR_045707 | |||||
| Natural variant | 402 | 1 | M → T in CFTD. Ref.60 | VAR_063846 | |||||
| Natural variant | 403 | 1 | I → M in CCD and MHS1. Ref.13 Ref.55 | VAR_005593 | |||||
| Natural variant | 471 | 1 | R → C. Ref.2 | VAR_005594 | |||||
| Natural variant | 485 | 1 | M → V. Ref.56 | VAR_032911 | |||||
| Natural variant | 522 | 1 | Y → S in CCD and MHS1. Ref.14 Ref.55 | VAR_005595 | |||||
| Natural variant | 530 | 1 | R → H in MHS1. Ref.59 | VAR_058563 | |||||
| Natural variant | 533 | 1 | R → C in MHS1. Ref.47 | VAR_045708 | |||||
| Natural variant | 533 | 1 | R → H in MHS1. | VAR_008971 | |||||
| Natural variant | 544 | 1 | D → Y in MHS1. Ref.59 | VAR_058564 | |||||
| Natural variant | 552 | 1 | R → W in MHS1. Ref.20 Ref.55 | VAR_005596 | |||||
| Natural variant | 614 | 1 | R → C in CCD and MHS1; 3-5% of the cases. Ref.7 Ref.8 Ref.31 Ref.36 Ref.37 Ref.46 Ref.51 Ref.53 Ref.55 Corresponds to variant rs28933996 [ dbSNP | Ensembl ]. | VAR_005597 | |||||
| Natural variant | 614 | 1 | R → L in MHS1. Ref.19 Ref.55 | VAR_005598 | |||||
| Natural variant | 1043 | 1 | R → C in MHS1. Ref.59 | VAR_058565 | |||||
| Natural variant | 1109 | 1 | R → K. Corresponds to variant rs35719391 [ dbSNP | Ensembl ]. | VAR_032912 | |||||
| Natural variant | 1342 | 1 | S → G. Ref.59 Corresponds to variant rs34694816 [ dbSNP | Ensembl ]. | VAR_032913 | |||||
| Natural variant | 1352 | 1 | A → G in MHS1. Ref.59 | VAR_058566 | |||||
| Natural variant | 1489 | 1 | S → N. Corresponds to variant rs34404839 [ dbSNP | Ensembl ]. | VAR_032914 | |||||
| Natural variant | 1704 | 1 | G → S in CCD; autosomal recessive form. Ref.58 | VAR_045709 | |||||
| Natural variant | 1787 | 1 | P → L. Ref.2 Ref.59 Corresponds to variant rs34934920 [ dbSNP | Ensembl ]. | VAR_005599 | |||||
| Natural variant | 1832 | 1 | G → A. Ref.4 Ref.42 Ref.59 | VAR_045710 | |||||
| Natural variant | 2035 | 1 | H → L in CFTD. Ref.60 | VAR_063847 | |||||
| Natural variant | 2060 | 1 | G → C. Ref.2 Ref.56 Ref.59 Corresponds to variant rs35364374 [ dbSNP | Ensembl ]. | VAR_005600 | |||||
| Natural variant | 2101 | 1 | M → K. Ref.47 | VAR_045711 | |||||
| Natural variant | 2117 | 1 | V → L in MHS1. Ref.47 | VAR_045712 | |||||
| Natural variant | 2129 | 1 | D → E in MHS1. Ref.34 Ref.36 | VAR_045713 | |||||
| Natural variant | 2163 | 1 | R → C in MHS1. Ref.21 Ref.51 Ref.55 Corresponds to variant rs28933998 [ dbSNP | Ensembl ]. | VAR_005601 | |||||
| Natural variant | 2163 | 1 | R → H in CCD and MHS1. Ref.21 Ref.40 Ref.55 Corresponds to variant rs28933999 [ dbSNP | Ensembl ]. | VAR_005602 | |||||
| Natural variant | 2163 | 1 | R → P in MHS1. Ref.47 | VAR_008972 | |||||
| Natural variant | 2168 | 1 | V → M in CCD and MHS1; no difference in the thapsigargin-sensitive calcium stores of cells carrying this mutation and the wild-type. Ref.21 Ref.31 Ref.32 Ref.33 Ref.36 Ref.47 Ref.51 Ref.55 | VAR_005603 | |||||
| Natural variant | 2206 | 1 | T → M in MHS1; induces an increase sensitivity to caffeine. Ref.21 Ref.31 Ref.36 Ref.40 Ref.51 Ref.55 Corresponds to variant rs28934000 [ dbSNP | Ensembl ]. | VAR_005604 | |||||
| Natural variant | 2206 | 1 | T → R in MHS1. Ref.55 | VAR_008973 | |||||
| Natural variant | 2214 | 1 | V → I in MHS1. Ref.31 Ref.51 | VAR_045714 | |||||
| Natural variant | 2280 | 1 | V → I in MHS1. Ref.40 | VAR_045715 | |||||
| Natural variant | 2321 | 1 | I → V. Ref.59 Corresponds to variant rs34390345 [ dbSNP | Ensembl ]. | VAR_058567 | |||||
| Natural variant | 2336 | 1 | R → H in MHS1. Ref.59 | VAR_058568 | |||||
| Natural variant | 2342 | 1 | N → S in MHS1. Ref.54 | VAR_045716 | |||||
| Natural variant | 2344 | 1 | E → D in MHS1; uncertain pathogenicity. Ref.55 | VAR_045717 | |||||
| Natural variant | 2346 | 1 | V → M in MHS1. Ref.53 Ref.55 | VAR_045718 | |||||
| Natural variant | 2347 | 1 | Missing in MHS1. | VAR_045719 | |||||
| Natural variant | 2348 | 1 | E → G in MHS1. Ref.53 | VAR_045720 | |||||
| Natural variant | 2350 | 1 | A → T in MHS1; reveals an altered calcium dependence and increased caffeine sensitivity. Ref.35 Ref.51 Ref.55 | VAR_045721 | |||||
| Natural variant | 2355 | 1 | R → C in MHS1. Ref.41 | VAR_045722 | |||||
| Natural variant | 2367 | 1 | A → T in MHS1. Ref.31 Ref.51 | VAR_045723 | |||||
| Natural variant | 2404 | 1 | E → K in MHS1. Ref.59 | VAR_058569 | |||||
| Natural variant | 2421 | 1 | A → P in CCD; autosomal recessive form. Ref.58 | VAR_045724 | |||||
| Natural variant | 2423 | 1 | M → K in MMDO and CCD; autosomal recessive form. Ref.56 Ref.58 | VAR_032915 | |||||
| Natural variant | 2428 | 1 | A → T in MHS1; induces an increase sensitivity to caffeine. Ref.36 Ref.55 | VAR_045725 | |||||
| Natural variant | 2431 | 1 | D → N in MHS1. Ref.31 Ref.51 | VAR_045726 | |||||
| Natural variant | 2434 | 1 | G → R in MHS1. Ref.16 Ref.17 Ref.31 Ref.36 Ref.40 Ref.51 Ref.55 | VAR_005605 | |||||
| Natural variant | 2435 | 1 | R → H in CCD and MHS1. Ref.3 Ref.36 Ref.55 Corresponds to variant rs28933396 [ dbSNP | Ensembl ]. | VAR_005606 | |||||
| Natural variant | 2435 | 1 | R → L in MHS1. Ref.24 Ref.40 Ref.47 | VAR_008974 | |||||
| Natural variant | 2437 | 1 | A → V in MHS1. Ref.51 | VAR_045727 | |||||
| Natural variant | 2452 | 1 | R → W in MHS1. Ref.26 Ref.36 Ref.53 | VAR_045728 | |||||
| Natural variant | 2454 | 1 | R → C in MHS1; induces an increase sensitivity to caffeine. Ref.28 Ref.37 Ref.55 | VAR_008975 | |||||
| Natural variant | 2454 | 1 | R → H in CCD and MHS1; severe form; induces an increase sensitivity to caffeine. Ref.24 Ref.26 Ref.31 Ref.36 Ref.47 Ref.51 Ref.55 | VAR_008976 | |||||
| Natural variant | 2458 | 1 | R → C in MHS1. Ref.22 Ref.40 Ref.55 Corresponds to variant rs28933397 [ dbSNP | Ensembl ]. | VAR_008977 | |||||
| Natural variant | 2458 | 1 | R → H in MHS1. Ref.22 Ref.53 | VAR_008978 | |||||
| Natural variant | 2509 | 1 | V → I. Corresponds to variant rs2071088 [ dbSNP | Ensembl ]. | VAR_051891 | |||||
| Natural variant | 2550 | 1 | L → V. Ref.2 Ref.4 Ref.59 | VAR_058570 | |||||
| Natural variant | 2676 | 1 | R → W in MHS1; located on the same allele as S-2787. Ref.52 Ref.55 Ref.59 Corresponds to variant rs28934001 [ dbSNP | Ensembl ]. | VAR_045729 | |||||
| Natural variant | 2730 | 1 | D → G in MHS1. Ref.59 | VAR_058571 | |||||
| Natural variant | 2779 | 1 | E → K. Corresponds to variant rs2915952 [ dbSNP | Ensembl ]. | VAR_051892 | |||||
| Natural variant | 2787 | 1 | T → S in MHS1; located on the same allele as W-2676. Ref.52 Ref.55 Ref.59 Corresponds to variant rs35180584 [ dbSNP | Ensembl ]. | VAR_045730 | |||||
| Natural variant | 2880 | 1 | E → K in MHS1. Ref.59 | VAR_058572 | |||||
| Natural variant | 3118 | 1 | A → V. Corresponds to variant rs2915960 [ dbSNP | Ensembl ]. | VAR_045731 | |||||
| Natural variant | 3217 | 1 | S → P in MHS1. Ref.59 | VAR_058573 | |||||
| Natural variant | 3290 | 1 | E → K in MHS1. Ref.59 | VAR_058574 | |||||
| Natural variant | 3326 | 1 | N → K in CFTD. Ref.60 | VAR_063848 | |||||
| Natural variant | 3402 | 1 | C → G in CFTD. Ref.60 | VAR_063849 | |||||
| Natural variant | 3527 | 1 | P → S in CCD; autosomal recessive form. Ref.38 | VAR_045732 | |||||
| Natural variant | 3539 | 1 | R → H in CCD; autosomal recessive form. Ref.58 | VAR_045733 | |||||
| Natural variant | 3583 | 1 | E → Q. Ref.59 Corresponds to variant rs55876273 [ dbSNP | Ensembl ]. | VAR_058575 | |||||
| Natural variant | 3756 | 1 | Q → E. Ref.42 Ref.59 Corresponds to variant rs4802584 [ dbSNP | Ensembl ]. | VAR_032916 | |||||
| Natural variant | 3772 | 1 | R → Q in CCD; autosomal recessive form. Ref.58 | VAR_045734 | |||||
| Natural variant | 3772 | 1 | R → W in MHS1. Ref.59 | VAR_058576 | |||||
| Natural variant | 3806 | 1 | G → R in MHS1. Ref.59 | VAR_058577 | |||||
| Natural variant | 3916 | 1 | I → M in MHS1. Ref.37 Ref.55 | VAR_045735 | |||||
| Natural variant | 4136 | 1 | R → S in MHS1. Ref.40 | VAR_045736 | |||||
| Natural variant | 4214 – 4216 | 3 | Missing in CCD. | VAR_045737 | |||||
| Natural variant | 4234 | 1 | V → L in MHS1. Ref.40 | VAR_045738 | |||||
| Natural variant | 4501 | 1 | P → L in MHS1. Ref.59 | VAR_058578 | |||||
| Natural variant | 4558 | 1 | R → Q in CCD; autosomal recessive form. Ref.57 Ref.58 | VAR_045739 | |||||
| Natural variant | 4637 | 1 | T → A in CCD. Ref.29 | VAR_045740 | |||||
| Natural variant | 4637 | 1 | T → I in core/rod disease. Ref.50 | VAR_045741 | |||||
| Natural variant | 4638 | 1 | G → D in CCD. Ref.50 Ref.53 | VAR_045742 | |||||
| Natural variant | 4647 – 4648 | 2 | Missing in CCD. | VAR_045743 | |||||
| Natural variant | 4650 | 1 | L → P in CCD; autosomal recessive form. Ref.46 | VAR_045744 | |||||
| Natural variant | 4651 | 1 | H → P in CCD. Ref.50 | VAR_045745 | |||||
| Natural variant | 4668 | 1 | P → S. Ref.42 | VAR_045746 | |||||
| Natural variant | 4684 | 1 | F → S in MHS1. Ref.55 | VAR_045747 | |||||
| Natural variant | 4724 | 1 | K → Q in CCD; autosomal recessive form. Ref.46 | VAR_045748 | |||||
| Natural variant | 4737 | 1 | R → Q in MHS1. Ref.55 | VAR_045749 | |||||
| Natural variant | 4737 | 1 | R → W in MHS1. Ref.40 Ref.55 | VAR_045750 | |||||
| Natural variant | 4793 | 1 | L → P in CCD. Ref.32 | VAR_045751 | |||||
| Natural variant | 4796 | 1 | Y → C in CCD. Ref.32 | VAR_045752 | |||||
| Natural variant | 4814 | 1 | L → F in CCD. Ref.53 | VAR_045753 | |||||
| Natural variant | 4824 | 1 | L → P in MHS1. Ref.51 Ref.53 | VAR_045754 | |||||
| Natural variant | 4825 | 1 | R → C in CCD. Ref.32 | VAR_045755 | |||||
| Natural variant | 4826 | 1 | T → I in MHS1. Ref.27 Ref.55 | VAR_045756 | |||||
| Natural variant | 4838 | 1 | L → V in MHS1. Ref.42 Ref.55 Ref.59 | VAR_045757 | |||||
| Natural variant | 4842 | 1 | V → M in CCD; autosomal recessive form. Ref.58 | VAR_045758 | |||||
| Natural variant | 4846 | 1 | A → V in CCD; autosomal recessive form. Ref.57 | VAR_045759 | |||||
| Natural variant | 4849 | 1 | V → I in MHS1 and CCD; autosomal recessive form. Ref.43 Ref.55 Ref.57 Ref.58 | VAR_045760 | |||||
| Natural variant | 4860 | 1 | Missing in CCD. | VAR_045761 | |||||
| Natural variant | 4861 | 1 | R → C in CCD. Ref.50 Ref.57 | VAR_045762 | |||||
| Natural variant | 4861 | 1 | R → H in CCD; release of calcium from intracellular stores in the absence of any pharmacological activator of RYR; smaller thapsigargin-sensitive intracellular calcium stores; normal sensitivity of the calcium release to the RYR inhibitor dantrolene. Ref.32 Ref.33 Ref.45 Ref.50 Ref.53 Ref.57 | VAR_045763 | |||||
| Natural variant | 4863 – 4869 | 7 | FYNKSED → Y in CCD. | VAR_045764 | |||||
| Natural variant | 4864 | 1 | Y → C in CCD. Ref.45 | VAR_045765 | |||||
| Natural variant | 4876 | 1 | K → R in MHS1. Ref.55 Ref.59 | VAR_045766 | |||||
| Natural variant | 4891 | 1 | G → R in CCD. Ref.33 | VAR_045767 | |||||
| Natural variant | 4893 | 1 | R → Q in CCD. Ref.50 | VAR_045768 | |||||
| Natural variant | 4893 | 1 | R → W in CCD; release of calcium from intracellular stores in the absence of any pharmacological activator of RYR; smaller thapsigargin-sensitive intracellular calcium stores; normal sensitivity of the calcium release to the RYR inhibitor dantrolene. Ref.32 Ref.33 Ref.45 | VAR_045769 | |||||
| Natural variant | 4897 | 1 | G → V in CCD. Ref.57 | VAR_045770 | |||||
| Natural variant | 4898 | 1 | I → T in CCD; severe phenotype; also present in some patients with MHS1; no response to the agonists halothane and caffeine. Ref.25 Ref.32 Ref.33 Ref.50 | VAR_045771 | |||||
| Natural variant | 4899 | 1 | G → E in CCD. Ref.32 Ref.46 | VAR_045772 | |||||
| Natural variant | 4899 | 1 | G → R in CCD; release of calcium from intracellular stores in the absence of any pharmacological activator of RYR; smaller thapsigargin-sensitive intracellular calcium stores; normal sensitivity of the calcium release to the RYR inhibitor dantrolene. Ref.33 | VAR_045773 | |||||
| Natural variant | 4906 | 1 | A → V in CCD. Ref.33 | VAR_045774 | |||||
| Natural variant | 4914 | 1 | R → G in CCD. Ref.32 Ref.50 | VAR_045775 | |||||
| Natural variant | 4914 | 1 | R → T in CCD. Ref.50 Ref.57 | VAR_045776 | |||||
| Natural variant | 4927 – 4928 | 2 | Missing in CCD. | VAR_045777 | |||||
| Natural variant | 4938 | 1 | I → M in CCD. Ref.53 | VAR_045778 | |||||
| Natural variant | 4938 | 1 | I → T in MHS1. Ref.59 | VAR_058579 | |||||
| Natural variant | 4939 | 1 | D → E in MHS1. Ref.53 Ref.55 | VAR_045779 | |||||
| Natural variant | 4940 | 1 | A → T in CCD. Ref.45 Ref.50 | VAR_045780 | |||||
| Natural variant | 4942 | 1 | G → V in MHS1. Ref.40 | VAR_045781 | |||||
| Natural variant | 4973 | 1 | P → L in MHS1. Ref.37 Ref.40 Ref.55 | VAR_045782 | |||||
Experimental info | |||||||||
| Sequence conflict | 1365 – 1368 | 4 | GEAQ → RGA AA sequence Ref.1 | ||||||
| Sequence conflict | 2324 | 1 | N → K AA sequence Ref.1 | ||||||
| Sequence conflict | 2840 | 1 | R → A AA sequence Ref.1 | ||||||
| Sequence conflict | 3380 | 1 | R → A AA sequence Ref.1 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Molecular cloning of cDNA encoding human and rabbit forms of the Ca2+ release channel (ryanodine receptor) of skeletal muscle sarcoplasmic reticulum." Zorzato F., Fujii J., Otsu K., Phillips M.S., Green N.M., Lai F.A., Meissner G., Maclennan D.H. J. Biol. Chem. 265:2244-2256(1990) [PubMed: 2298749] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 2), PARTIAL PROTEIN SEQUENCE. Tissue: Skeletal muscle. |
| [2] | "Polymorphisms and deduced amino acid substitutions in the coding sequence of the ryanodine receptor (RYR1) gene in individuals with malignant hyperthermia." Gillard E.F., Otsu K., Fujii J., Duff C.L., de Leon S., Khanna V.K., Britt B.A., Worton R.G., McLennan D.H. Genomics 13:1247-1254(1992) [PubMed: 1354642] [Abstract] Cited for: SEQUENCE REVISION TO 2324; 2840 AND 3380, VARIANT MHS1 ARG-248, VARIANTS CYS-471; LEU-1787; CYS-2060 AND VAL-2550. Tissue: Muscle. |
| [3] | "A mutation in the human ryanodine receptor gene associated with central core disease." Zhang Y., Chen H.S., Khanna V.K., de Leon S., Phillips M.S., Schappert K.T., Britt B.A., Brownell A.K.W., McLennan D.H. Nat. Genet. 5:46-50(1993) [PubMed: 8220422] [Abstract] Cited for: SEQUENCE REVISION TO 1365-1368, VARIANT CCD/MHS1 HIS-2435, ALTERNATIVE SPLICING. Tissue: Muscle. |
| [4] | "The structural organization of the human skeletal muscle ryanodine receptor (RYR1) gene." Phillips M.S., Fujii J., Khanna V.K., de Leon S., Yokobata K., de Jong P.J., McLennan D.H. Genomics 34:24-41(1996) [PubMed: 8661021] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], ALTERNATIVE SPLICING, VARIANTS ALA-1832 AND VAL-2550. |
| [5] | "The DNA sequence and biology of human chromosome 19." Grimwood J., Gordon L.A., Olsen A.S., Terry A., Schmutz J., Lamerdin J.E., Hellsten U., Goodstein D., Couronne O., Tran-Gyamfi M., Aerts A., Altherr M., Ashworth L., Bajorek E., Black S., Branscomb E., Caenepeel S., Carrano A.V. Lucas S.M.Nature 428:529-535(2004) [PubMed: 15057824] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [6] | "Refinement of diagnostic assays for a probable causal mutation for porcine and human malignant hyperthermia." Otsu K., Phillips M.S., Khanna V.K., de Leon S., McLennan D.H. Genomics 13:835-837(1992) [PubMed: 1639409] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 598-722. Tissue: Skeletal muscle. |
| [7] | "A substitution of cysteine for arginine 614 in the ryanodine receptor is potentially causative of human malignant hyperthermia." Gillard E.F., Otsu K., Fujii J., Khanna V.K., de Leon S., Derdemezi J., Britt B.A., Duff C.L., Worton R.G., MacLennan D.H. Genomics 11:751-755(1991) [PubMed: 1774074] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 603-641, VARIANT MHS1 CYS-614. |
| [8] | "Ryanodine receptor gene point mutation and malignant hyperthermia susceptibility." Moroni I., Gonano E.F., Comi G.P., Tegazzin V., Prelle A., Bordoni A., Bresolin N., Scarlato G. J. Neurol. 242:127-133(1995) [PubMed: 7751854] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 603-627, VARIANT MHS1 CYS-614. |
| [9] | "Isolation and partial cloning of ryanodine-sensitive Ca2+ release channel protein isoforms from human myometrial smooth muscle." Lynn S., Morgan J.M., Lamb H.K., Meissner G., Gillespie J.I. FEBS Lett. 372:6-12(1995) [PubMed: 7556644] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 4696-4974. Tissue: Myometrium. |
| [10] | "Partial cloning and differential expression of ryanodine receptor/calcium-release channel genes in human tissues including the hippocampus and cerebellum." Martin C., Chapman K.E., Seckl J.R., Ashley R.H. Neuroscience 85:205-216(1998) [PubMed: 9607712] [Abstract] Cited for: TISSUE SPECIFICITY. |
| [11] | "Cysteine-3635 is responsible for skeletal muscle ryanodine receptor modulation by NO." Sun J., Xin C., Eu J.P., Stamler J.S., Meissner G. Proc. Natl. Acad. Sci. U.S.A. 98:11158-11162(2001) [PubMed: 11562475] [Abstract] Cited for: S-NITROSYLATION AT CYS-3635. |
| [12] | "Large-scale phosphoproteome analysis of human liver tissue by enrichment and fractionation of phosphopeptides with strong anion exchange chromatography." Han G., Ye M., Zhou H., Jiang X., Feng S., Jiang X., Tian R., Wan D., Zou H., Gu J. Proteomics 8:1346-1361(2008) [PubMed: 18318008] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT TYR-4864 AND SER-4867, MASS SPECTROMETRY. Tissue: Liver. |
| [13] | "Mutations in the ryanodine receptor gene in central core disease and malignant hyperthermia." Quane K.A., Healy J.M.S., Keating K.E., Manning B.M., Couch F.J., Palmucci L.M., Doriguzzi C., Fagerlund T.H., Berg K., Ording H., Bendixen D., Mortier W., Linz U., Muller C.R., McCarthy T.V. Nat. Genet. 5:51-55(1993) [PubMed: 8220423] [Abstract] Cited for: VARIANTS CCD/MHS1 CYS-163 AND MET-403. |
| [14] | "Mutation screening of the RYR1 gene in malignant hyperthermia: detection of a novel Tyr to Ser mutation in a pedigree with associated central cores." Quane K.A., Keating K.E., Healy J.M.S., Manning B.M., Krivosic-Horber R., Krivosic I., Monnier N., Lunardi J., McCarthy T.V. Genomics 23:236-239(1994) [PubMed: 7829078] [Abstract] Cited for: VARIANT CCD/MHS1 SER-522. |
| [15] | "Detection of a novel common mutation in the ryanodine receptor gene in malignant hyperthermia: implications for diagnosis and heterogeneity studies." Quane K.A., Keating K.E., Manning B.M., Healy J.M.S., Monsieurs K., Heffron J.J.A., Lehane M., Heytens L., Krivosic-Horber R., Adnet P., Ellis F.R., Monnier N., Lunardi J., McCarthy T.V. Hum. Mol. Genet. 3:471-476(1994) [PubMed: 8012359] [Abstract] Cited for: VARIANT MHS1 ARG-341. |
| [16] | "Detection of a novel RYR1 mutation in four malignant hyperthermia pedigrees." Keating K.E., Quane K.A., Manning B.M., Lehane M., Hartung E., Censier K., Urwyler A., Klausnitzer M., Muller C.R., Heffron J.J.A., McCarthy T.V. Hum. Mol. Genet. 3:1855-1858(1994) [PubMed: 7849712] [Abstract] Cited for: VARIANT MHS1 ARG-2434. |
| [17] | "The substitution of Arg for Gly2433 in the human skeletal muscle ryanodine receptor is associated with malignant hyperthermia." Phillips M.S., Khanna V.K., de Leon S., Frodis W., Britt B.A., McLennan D.H. Hum. Mol. Genet. 3:2181-2186(1994) [PubMed: 7881417] [Abstract] Cited for: VARIANT MHS1 ARG-2434. |
| [18] | "Identification of heterozygous and homozygous individuals with the novel RYR1 mutation Cys35Arg in a large kindred." Lynch P.J., Krivosic-Horber R., Reyford H., Monnier N., Quane K.A., Adnet P., Haudecoeur G., Krivosic I., McCarthy T.V., Lunardi J. Anesthesiology 86:620-626(1997) [PubMed: 9066328] [Abstract] Cited for: VARIANT MHS1 ARG-35. |
| [19] | "Detection of a novel mutation at amino acid position 614 in the ryanodine receptor in malignant hyperthermia." Quane K.A., Ording H., Keating K.E., Manning B.M., Heine R., Bendixen D., Berg K., Krivosic-Horber R., Lehmann-Horn F., Fagerlund T.H., McCarthy T.V. Br. J. Anaesth. 79:332-337(1997) [PubMed: 9389851] [Abstract] Cited for: VARIANT MHS1 LEU-614. |
| [20] | "Detection of a novel mutation in the ryanodine receptor gene in an Irish malignant hyperthermia pedigree: correlation of the IVCT response with the affected and unaffected haplotypes." Keating K.E., Giblin L., Lynch P.J., Quane K.A., Lehane M., Heffron J.J.A., McCarthy T.V. J. Med. Genet. 34:291-296(1997) [PubMed: 9138151] [Abstract] Cited for: VARIANT MHS1 TRP-552. |
| [21] | "Identification of novel mutations in the ryanodine-receptor gene (RYR1) in malignant hyperthermia: genotype-phenotype correlation." Manning B.M., Quane K.A., Ording H., Urwyler A., Tegazzin V., Lehane M., O'Halloran J., Hartung E., Giblin L.M., Lynch P.J., Vaughan P., Censier K., Bendixen D., Comi G.P., Heytens L., Monsieurs K., Fagerlund T.H., Wolz W. McCarthy T.V.Am. J. Hum. Genet. 62:599-609(1998) [PubMed: 9497245] [Abstract] Cited for: VARIANTS MHS1 CYS-2163; MET-2168 AND MET-2206, VARIANT CCD/MHS1 HIS-2163. |
| [22] | "Novel mutations at a CpG dinucleotide in the ryanodine receptor in malignant hyperthermia." Manning B.M., Quane K.A., Lynch P.J., Urwyler A., Tegazzin V., Krivosic-Horber R., Censier K., Comi G.P., Adnet P., Wolz W., Lunardi J., Muller C.R., McCarthy T.V. Hum. Mutat. 11:45-50(1998) [PubMed: 9450902] [Abstract] Cited for: VARIANTS MHS1 CYS-2458 AND HIS-2458. |
| [23] | "Screening of the ryanodine receptor gene in 105 malignant hyperthermia families: novel mutations and concordance with the in vitro contracture test." Brandt A., Schleithoff L., Jurkat-Rott K., Klingler W., Baur C., Lehmann-Horn F. Hum. Mol. Genet. 8:2055-2062(1999) [PubMed: 10484775] [Abstract] Cited for: VARIANTS MHS1. |
| [24] | "Mutation screening of the RYR1 gene and identification of two novel mutations in Italian malignant hyperthermia families." Barone V., Massa O., Intravaia E., Bracco A., Di Martino A., Tegazzin V., Cozzolino S., Sorrentino V. J. Med. Genet. 36:115-118(1999) [PubMed: 10051009] [Abstract] Cited for: VARIANT MHS1 LEU-2435, VARIANT CCD/MHS1 HIS-2454. |
| [25] | "A mutation in the transmembrane/luminal domain of the ryanodine receptor is associated with abnormal Ca(2+) release channel function and severe central core disease." Lynch P.J., Tong J., Lehane M., Mallet A., Giblin L., Heffron J.J.A., Vaughan P., Zafra G., MacLennan D.H., McCarthy T.V. Proc. Natl. Acad. Sci. U.S.A. 96:4164-4169(1999) [PubMed: 10097181] [Abstract] Cited for: VARIANT CCD THR-4898, CHARACTERIZATION OF VARIANT CCD THR-4898. |
| [26] | "Malignant hyperthermia in infancy and identification of novel RYR1 mutation." Chamley D., Pollock N.A., Stowell K.M., Brown R.L. Br. J. Anaesth. 84:500-504(2000) [PubMed: 10823104] [Abstract] Cited for: VARIANTS MHS1 TRP-2452 AND HIS-2454. |
| [27] | "A novel ryanodine receptor mutation and genotype-phenotype correlation in a large malignant hyperthermia New Zealand Maori pedigree." Brown R.L., Pollock A.N., Couchman K.G., Hodges M., Hutchinson D.O., Waaka R., Lynch P., McCarthy T.V., Stowell K.M. Hum. Mol. Genet. 9:1515-1524(2000) [PubMed: 10888602] [Abstract] Cited for: VARIANT MHS1 ILE-4826. |
| [28] | "Novel mutation in the RYR1 gene (R2454C) in a patient with malignant hyperthermia." Gencik M., Gencik A., Mortier W., Epplen J.T. Hum. Mutat. 15:122-122(2000) [PubMed: 10612851] [Abstract] Cited for: VARIANT MHS1 CYS-2454. |
| [29] | "A novel ryanodine receptor gene mutation causing both cores and rods in congenital myopathy." Scacheri P.C., Hoffman E.P., Fratkin J.D., Semino-Mora C., Senchak A., Davis M.R., Laing N.G., Vedanarayanan V., Subramony S.H. Neurology 55:1689-1696(2000) [PubMed: 11113224] [Abstract] Cited for: VARIANT CCD ALA-4637. |
| [30] | "Single-amino-acid deletion in the RYR1 gene, associated with malignant hyperthermia susceptibility and unusual contraction phenotype." Sambuughin N., McWilliams S., de Bantel A., Sivakumar K., Nelson T.E. Am. J. Hum. Genet. 69:204-208(2001) [PubMed: 11389482] [Abstract] Cited for: VARIANT MHS1 GLU-2347 DEL. |
| [31] | "North American malignant hyperthermia population: screening of the ryanodine receptor gene and identification of novel mutations." Sambuughin N., Sei Y., Gallagher K.L., Wyre H.W., Madsen D., Nelson T.E., Fletcher J.E., Rosenberg H., Muldoon S.M. Anesthesiology 95:594-599(2001) [PubMed: 11575529] [Abstract] Cited for: VARIANTS MHS1 CYS-163; ARG-248; CYS-614; MET-2168; MET-2206; ILE-2214; THR-2367; ASN-2431; ARG-2434 AND HIS-2454. |
| [32] | "Familial and sporadic forms of central core disease are associated with mutations in the C-terminal domain of the skeletal muscle ryanodine receptor." Monnier N., Romero N.B., Lerale J., Landrieu P., Nivoche Y., Fardeau M., Lunardi J. Hum. Mol. Genet. 10:2581-2592(2001) [PubMed: 11709545] [Abstract] Cited for: VARIANTS CCD MET-2168; 4214-ARG--4216-PHE DEL; 4647-LEU-SER-4648 DEL; PRO-4793; CYS-4796; CYS-4825; PHE-4860 DEL; HIS-4861; TRP-4893; THR-4898; GLU-4899 AND GLY-4914. |
| [33] | "Identification of four novel mutations in the C-terminal membrane spanning domain of the ryanodine receptor 1: association with central core disease and alteration of calcium homeostasis." Tilgen N., Zorzato F., Halliger-Keller B., Muntoni F., Sewry C., Palmucci L.M., Schneider C., Hauser E., Lehmann-Horn F., Mueller C.R., Treves S. Hum. Mol. Genet. 10:2879-2887(2001) [PubMed: 11741831] [Abstract] Cited for: VARIANTS CCD HIS-4861; ARG-4891; THR-4898; ARG-4899 AND VAL-4906, CHARACTERIZATION OF VARIANTS CCD MET-2168; HIS-4861; TRP-4893; THR-4898 AND ARG-4899. |
| [34] | "Identification of a novel mutation in the ryanodine receptor gene (RYR1) in patients with malignant hyperthermia." Rueffert H., Kraus H., Olthoff D., Deutrich C., Froster U.G. Hum. Mutat. 17:238-238(2001) [PubMed: 11241852] [Abstract] Cited for: VARIANT MHS1 GLU-2129. |
| [35] | "Identification and functional characterization of a novel ryanodine receptor mutation causing malignant hyperthermia in North American and South American families." Sambuughin N., Nelson T.E., Jankovic J., Xin C., Meissner G., Mullakandov M., Ji J., Rosenberg H., Sivakumar K., Goldfarb L.G. Neuromuscul. Disord. 11:530-537(2001) [PubMed: 11525881] [Abstract] Cited for: VARIANT MHS1 THR-2350, CHARACTERIZATION OF VARIANT MHS1 THR-2350. |
| [36] | "Mutation screening in the ryanodine receptor 1 gene (RYR1) in patients susceptible to malignant hyperthermia who show definite IVCT results: identification of three novel mutations." Rueffert H., Olthoff D., Deutrich C., Meinecke C.D., Froster U.G. Acta Anaesthesiol. Scand. 46:692-698(2002) [PubMed: 12059893] [Abstract] Cited for: VARIANTS MHS1 CYS-163; ASN-166; ARG-341; HIS-401; CYS-614; GLU-2129; MET-2168; MET-2206; THR-2428; ARG-2434; HIS-2435; TRP-2452 AND HIS-2454. |
| [37] | "Presence of two different genetic traits in malignant hyperthermia families: implication for genetic analysis, diagnosis, and incidence of malignant hyperthermia susceptibility." Monnier N., Krivosic-Horber R., Payen J.-F., Kozak-Ribbens G., Nivoche Y., Adnet P., Reyford H., Lunardi J. Anesthesiology 97:1067-1074(2002) [PubMed: 12411788] [Abstract] Cited for: VARIANTS MHS1 CYS-163; ARG-341; CYS-614; CYS-2454; MET-3916 AND LEU-4973. |
| [38] | "A recessive form of central core disease, transiently presenting as multi-minicore disease, is associated with a homozygous mutation in the ryanodine receptor type 1 gene." Ferreiro A., Monnier N., Romero N.B., Leroy J.-P., Boennemann C., Haenggeli C.-A., Straub V., Voss W.D., Nivoche Y., Jungbluth H., Lemainque A., Voit T., Lunardi J., Fardeau M., Guicheney P. Ann. Neurol. 51:750-759(2002) [PubMed: 12112081] [Abstract] Cited for: VARIANT CCD SER-3527. |
| [39] | "Malignant hyperthermia associated with exercise-induced rhabdomyolysis or congenital abnormalities and a novel RYR1 mutation in New Zealand and Australian pedigrees." Davis M., Brown R., Dickson A., Horton H., James D., Laing N., Marston R., Norgate M., Perlman D., Pollock N., Stowell K. Br. J. Anaesth. 88:508-515(2002) [PubMed: 12066726] [Abstract] Cited for: VARIANT MHS1 CYS-401. |
| [40] | "Mutations in the RYR1 gene in Italian patients at risk for malignant hyperthermia: evidence for a cluster of novel mutations in the C-terminal region." Galli L., Orrico A., Cozzolino S., Pietrini V., Tegazzin V., Sorrentino V. Cell Calcium 32:143-151(2002) [PubMed: 12208234] [Abstract] Cited for: VARIANTS MHS1 CYS-163; CYS-401; HIS-2163; MET-2206; ILE-2280; ARG-2434; LEU-2435; CYS-2458; SER-4136; LEU-4234; TRP-4737; VAL-4942 AND LEU-4973. |
| [41] | "Novel skeletal muscle ryanodine receptor mutation in a large Brazilian family with malignant hyperthermia." McWilliams S., Nelson T., Sudo R.T., Zapata-Sudo G., Batti M., Sambuughin N. Clin. Genet. 62:80-83(2002) [PubMed: 12123492] [Abstract] Cited for: VARIANT MHS1 CYS-2355. |
| [42] | "Novel mutations in C-terminal channel region of the ryanodine receptor in malignant hyperthermia patients." Oyamada H., Oguchi K., Saitoh N., Yamazawa T., Hirose K., Kawana Y., Wakatsuki K., Oguchi K., Tagami M., Hanaoka K., Endo M., Iino M. Jpn. J. Pharmacol. 88:159-166(2002) [PubMed: 11928716] [Abstract] Cited for: VARIANT MHS1 VAL-4838, VARIANTS ALA-1832; GLU-3756 AND SER-4668. |
| [43] | "Autosomal recessive inheritance of RYR1 mutations in a congenital myopathy with cores." Jungbluth H., Muller C.R., Halliger-Keller B., Brockington M., Brown S.C., Feng L., Chattopadhyay A., Mercuri E., Manzur A.Y., Ferreiro A., Laing N.G., Davis M.R., Roper H.P., Dubowitz V., Bydder G., Sewry C.A., Muntoni F. Neurology 59:284-287(2002) [PubMed: 12136074] [Abstract] Cited for: VARIANT CCD ILE-4849. |
| [44] | "Detection of a novel ryanodine receptor subtype 1 mutation (R328W) in a malignant hyperthermia family by sequencing of a leukocyte transcript." Loke J.C.P., Kraev N., Sharma P., Du G., Patel L., Kraev A., MacLennan D.H. Anesthesiology 99:297-302(2003) [PubMed: 12883402] [Abstract] Cited for: VARIANT MHS1 TRP-328, CHARACTERIZATION OF VARIANT MHS1 TRP-328. |
| [45] | "Central core disease: clinical, pathological, and genetic features." Quinlivan R.M., Muller C.R., Davis M., Laing N.G., Evans G.A., Dwyer J., Dove J., Roberts A.P., Sewry C.A. Arch. Dis. Child. 88:1051-1055(2003) [PubMed: 14670767] [Abstract] Cited for: VARIANTS CCD HIS-4861; CYS-4864; TRP-4893 AND THR-4940. |
| [46] | "Dominant and recessive central core disease associated with RYR1 mutations and fetal akinesia." Romero N.B., Monnier N., Viollet L., Cortey A., Chevallay M., Leroy J.P., Lunardi J., Fardeau M. Brain 126:2341-2349(2003) [PubMed: 12937085] [Abstract] Cited for: VARIANTS CCD GLU-215; CYS-614; PRO-4650; GLN-4724 AND GLU-4899. |
| [47] | "Scanning for mutations of the ryanodine receptor (RYR1) gene by denaturing HPLC: detection of three novel malignant hyperthermia alleles." Tammaro A., Bracco A., Cozzolino S., Esposito M., Di Martino A., Savoia G., Zeuli L., Piluso G., Aurino S., Nigro V. Clin. Chem. 49:761-768(2003) [PubMed: 12709367] [Abstract] Cited for: VARIANTS MHS1 CYS-44; CYS-533; LEU-2117; PRO-2163; MET-2168; LEU-2435 AND HIS-2454, VARIANT LYS-2101. |
| [48] | "Clinical and functional effects of a deletion in a COOH-terminal lumenal loop of the skeletal muscle ryanodine receptor." Zorzato F., Yamaguchi N., Xu L., Meissner G., Mueller C.R., Pouliquin P., Muntoni F., Sewry C., Girard T., Treves S. Hum. Mol. Genet. 12:379-388(2003) [PubMed: 12566385] [Abstract] Cited for: VARIANT CCD 4863-ARG--ASP-4869 DELINS TYR. |
| [49] | "A homozygous splicing mutation causing a depletion of skeletal muscle RYR1 is associated with multi-minicore disease congenital myopathy with ophthalmoplegia." Monnier N., Ferreiro A., Marty I., Labarre-Vila A., Mezin P., Lunardi J. Hum. Mol. Genet. 12:1171-1178(2003) [PubMed: 12719381] [Abstract] Cited for: INVOLVEMENT IN MMDO. |
| [50] | "Principal mutation hotspot for central core disease and related myopathies in the C-terminal transmembrane region of the RYR1 gene." Davis M.R., Haan E., Jungbluth H., Sewry C., North K., Muntoni F., Kuntzer T., Lamont P., Bankier A., Tomlinson P., Sanchez A., Walsh P., Nagarajan L., Oley C., Colley A., Gedeon A., Quinlivan R., Dixon J. Laing N.G.Neuromuscul. Disord. 13:151-157(2003) [PubMed: 12565913] [Abstract] Cited for: VARIANT CORE/ROD DISEASE ILE-4637, VARIANTS CCD ASP-4638; PRO-4651; CYS-4861; HIS-4861; GLN-4893; THR-4898; GLY-4914; THR-4914; 4927-VAL-ILE-4928 DEL AND THR-4940. |
| [51] | "Malignant hyperthermia in North America: genetic screening of the three hot spots in the type I ryanodine receptor gene." Sei Y., Sambuughin N.N., Davis E.J., Sachs D., Cuenca P.B., Brandom B.W., Tautz T., Rosenberg H., Nelson T.E., Muldoon S.M. Anesthesiology 101:824-830(2004) [PubMed: 15448513] [Abstract] Cited for: VARIANTS MHS1 CYS-163; ARG-248; CYS-614; CYS-2163; MET-2168; MET-2206; ILE-2214; THR-2350; THR-2367; ASN-2431; ARG-2434; VAL-2437; HIS-2454 AND PRO-4824. |
| [52] | "Multiminicore disease in a family susceptible to malignant hyperthermia: histology, in vitro contracture tests, and genetic characterization." Guis S., Figarella-Branger D., Monnier N., Bendahan D., Kozak-Ribbens G., Mattei J.-P., Lunardi J., Cozzone P.J., Pellissier J.-F. Arch. Neurol. 61:106-113(2004) [PubMed: 14732627] [Abstract] Cited for: VARIANTS MHS1 TRP-2676 AND SER-2787. |
| [53] | "RYR1 mutations in UK central core disease patients: more than just the C-terminal transmembrane region of the RYR1 gene." Shepherd S., Ellis F., Halsall J., Hopkins P., Robinson R. J. Med. Genet. 41:E33-E33(2004) [PubMed: 14985404] [Abstract] Cited for: VARIANTS CCD GLY-160; ASP-4638; PHE-4814; HIS-4861 AND MET-4938, VARIANTS MHS1 CYS-614; MET-2346; GLY-2348; TRP-2452; HIS-2458; PRO-4824 AND GLU-4939. |
| [54] | "Mutation analysis of two patients with hypokalemic periodic paralysis and suspected malignant hyperthermia." Marchant C.L., Ellis F.R., Halsall P.J., Hopkins P.M., Robinson R.L. Muscle Nerve 30:114-117(2004) [PubMed: 15221887] [Abstract] Cited for: VARIANT MHS1 SER-2342. |
| [55] | "Correlations between genotype and pharmacological, histological, functional, and clinical phenotypes in malignant hyperthermia susceptibility." Monnier N., Kozak-Ribbens G., Krivosic-Horber R., Nivoche Y., Qi D., Kraev N., Loke J., Sharma P., Tegazzin V., Figarella-Branger D., Romero N., Mezin P., Bendahan D., Payen J.-F., Depret T., Maclennan D.H., Lunardi J. Hum. Mutat. 26:413-425(2005) [PubMed: 16163667] [Abstract] Cited for: VARIANTS MHS1 ARG-35; CYS-163; LEU-163; ARG-165; ASN-166; CYS-177; CYS-178; VAL-227; ARG-248; TRP-328; ARG-341; SER-401; HIS-401; MET-403; SER-522; TRP-552; CYS-614; LEU-614; CYS-2163; HIS-2163; MET-2168; MET-2206; ARG-2206; ASP-2344; MET-2346; THR-2350; THR-2428; ARG-2434; HIS-2435; CYS-2454; HIS-2454; CYS-2458; TRP-2676; SER-2787; MET-3916; SER-4684; GLN-4737; TRP-4737; ILE-4826; VAL-4838; ILE-4849; ARG-4876; GLU-4939 AND LEU-4973, CHARACTERIZATION OF VARIANTS MHS1 LEU-163; MET-2206; THR-2428; CYS-2454 AND HIS-2454. |
| [56] | "Minicore myopathy with ophthalmoplegia caused by mutations in the ryanodine receptor type 1 gene." Jungbluth H., Zhou H., Hartley L., Halliger-Keller B., Messina S., Longman C., Brockington M., Robb S.A., Straub V., Voit T., Swash M., Ferreiro A., Bydder G., Sewry C.A., Mueller C., Muntoni F. Neurology 65:1930-1935(2005) [PubMed: 16380615] [Abstract] Cited for: VARIANTS MMDO TRP-109 AND LYS-2423, VARIANTS VAL-485 AND CYS-2060. |
| [57] | "Central core disease due to recessive mutations in RYR1 gene: is it more common than described?" Kossugue P.M., Paim J.F., Navarro M.M., Silva H.C., Pavanello R.C.M., Gurgel-Giannetti J., Zatz M., Vainzof M. Muscle Nerve 35:670-674(2007) [PubMed: 17226826] [Abstract] Cited for: VARIANTS CCD GLN-4558; VAL-4846; ILE-4849; HIS-4861; CYS-4861; VAL-4897 AND THR-4914. |
| [58] | "Null mutations causing depletion of the type 1 ryanodine receptor (RYR1) are commonly associated with recessive structural congenital myopathies with cores." Monnier N., Marty I., Faure J., Castiglioni C., Desnuelle C., Sacconi S., Estournet B., Ferreiro A., Romero N., Laquerriere A., Lazaro L., Martin J.-J., Morava E., Rossi A., Van der Kooi A., de Visser M., Verschuuren C., Lunardi J. Hum. Mutat. 29:670-678(2008) [PubMed: 18253926] [Abstract] Cited for: VARIANTS CCD VAL-13; SER-1704; PRO-2421; LYS-2423; HIS-3539; GLN-3772; GLN-4558; MET-4842 AND ILE-4849. |
| [59] | "Increasing the number of diagnostic mutations in malignant hyperthermia." Levano S., Vukcevic M., Singer M., Matter A., Treves S., Urwyler A., Girard T. Hum. Mutat. 30:590-598(2009) [PubMed: 19191329] [Abstract] Cited for: VARIANTS MHS1 ARG-13; LYS-226; LEU-367; HIS-530; TYR-544; CYS-1043; GLY-1352; HIS-2336; LYS-2404; TRP-2676; GLY-2730; SER-2787; LYS-2880; PRO-3217; LYS-3290; TRP-3772; ARG-3806; LEU-4501; VAL-4838; ARG-4876 AND THR-4938, VARIANTS GLY-1342; LEU-1787; ALA-1832; CYS-2060; VAL-2321; VAL-2550; GLN-3583 AND GLU-3756. |
| [60] | "Recessive mutations in RYR1 are a common cause of congenital fiber type disproportion." Clarke N.F., Waddell L.B., Cooper S.T., Perry M., Smith R.L.L., Kornberg A.J., Muntoni F., Lillis S., Straub V., Bushby K., Guglieri M., King M.D., Farrell M.A., Marty I., Lunardi J., Monnier N., North K.N. Hum. Mutat. 31:E1544-E1550(2010) [PubMed: 20583297] [Abstract] Cited for: VARIANTS CFTD THR-402; LEU-2035; LYS-3326 AND GLY-3402. |
| + | Additional computationally mapped references. |
Web resources
| GeneReviews |
| Wikipedia Ryanodine receptor entry |
| Wikipedia RYR1 entry |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | J05200 mRNA. Translation: AAA60294.1. U48508 U48507 Genomic DNA. Translation: AAC51191.1.AC067969 Genomic DNA. Translation: AAF66076.1. AC005933 Genomic DNA. Translation: AAC71651.1. AC011469 Genomic DNA. No translation available. M91455 Genomic DNA. Translation: AAA60295.1. S78717 Genomic DNA. Translation: AAB21245.2. S77392 Genomic DNA. Translation: AAB34356.1. |
| IPI | IPI00220558. IPI00334799. IPI00783826. |
| PIR | A35041. |
| RefSeq | NP_000531.2. NM_000540.2. NP_001036188.1. NM_001042723.1. |
| UniGene | Hs.466664. |
3D structure databases | |
| ProteinModelPortal | P21817. |
| SMR | P21817. Positions 11-531, 846-1056, 1076-1207, 2734-2940, 3614-3640, 4074-4130. |
| ModBase | Search... |
Protein-protein interaction databases | |
| DIP | DIP-29708N. |
| IntAct | P21817. 4 interactions. |
| MINT | MINT-1605046. |
| STRING | P21817. |
Protein family/group databases | |
| TCDB | 1.A.3.1.2. ryanodine-inositol 1,4,5-triphosphate receptor Ca2+ channel (RIR-CaC) family. |
PTM databases | |
| PhosphoSite | P21817. |
Polymorphism databases | |
| DMDM | 108935904. |
Proteomic databases | |
| PRIDE | P21817. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000359596; ENSP00000352608; ENSG00000196218. |
| GeneID | 6261. |
| KEGG | hsa:6261. |
| UCSC | uc002oit.1. human. uc002oiu.1. human. |
Organism-specific databases | |
| CTD | 6261. |
| GeneCards | GC19P038924. |
| HGNC | HGNC:10483. RYR1. |
| HPA | CAB006835. |
| MIM | 117000. phenotype. 145600. phenotype. 180901. gene. 255310. phenotype. 255320. phenotype. |
| neXtProt | NX_P21817. |
| Orphanet | 169189. Autosomal dominant centronuclear myopathy. 597. Central core disease. 98905. Congenital multicore myopathy with external ophthalmoplegia. 99741. King-Denborough syndrome. 423. Malignant hyperthermia. 598. Multiminicore myopathy. |
| PharmGKB | PA34896. |
| GenAtlas | Search... |
Phylogenomic databases | |
| HOGENOM | HBG315203. |
| HOVERGEN | HBG006699. |
| InParanoid | P21817. |
| OMA | TENTIIF. |
| PhylomeDB | P21817. |
Gene expression databases | |
| ArrayExpress | P21817. |
| Bgee | P21817. |
| CleanEx | HS_RYR1. |
| Genevestigator | P21817. |
| GermOnline | ENSG00000196218. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR001870. B30.2/SPRY. IPR000699. Ca-rel_channel. IPR008985. ConA-like_lec_gl. IPR011992. EF-hand-like_dom. IPR014821. Ins145_P3_rcpt. IPR005821. Ion_trans. IPR003608. MIR. IPR016093. MIR_motif. IPR013662. RIH_assoc-dom. IPR013333. Ryan_recept. IPR003032. Ryanodine_rcpt. IPR015925. Ryanodine_recept-rel. IPR009460. Ryanrecept_TM4-6. IPR018355. SPla/RYanodine_receptor_subgr. IPR003877. SPRY_rcpt. [Graphical view] |
| Gene3D | G3DSA:1.10.238.10. EF-Hand_type. 1 hit. |
| KO | K04961. |
| PANTHER | PTHR13715. Ryanodine_recept-rel. 1 hit. |
| Pfam | PF08709. Ins145_P3_rec. 1 hit. PF00520. Ion_trans. 1 hit. PF02815. MIR. 1 hit. PF08454. RIH_assoc. 1 hit. PF06459. RR_TM4-6. 1 hit. PF01365. RYDR_ITPR. 2 hits. PF02026. RyR. 4 hits. PF00622. SPRY. 3 hits. [Graphical view] |
| PRINTS | PR00795. RYANODINER. |
| SMART | SM00472. MIR. 4 hits. SM00449. SPRY. 3 hits. [Graphical view] |
| SUPFAM | SSF49899. ConA_like_lec_gl. 3 hits. SSF82109. MIR. 1 hit. |
| PROSITE | PS50188. B302_SPRY. 3 hits. PS50919. MIR. 5 hits. [Graphical view] |
| ProtoNet | Search... |
Other | |
| DrugBank | DB01219. Dantrolene. |
| NextBio | 24319. |
| SOURCE | Search... |
Entry information
| Entry name | RYR1_HUMAN | ||||||||
| Accession | Primary (citable) accession number: P21817 Secondary accession number(s): Q16314 Q9P1U4 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 19 Human chromosome 19: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with