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P21700

- NCAP_RVFVZ

UniProt

P21700 - NCAP_RVFVZ

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Protein

Nucleoprotein

Gene

N

Organism
Rift valley fever virus (strain ZH-548 M12) (RVFV)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. RNA binding Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein

Keywords - Ligandi

RNA-binding, Viral nucleoprotein

Names & Taxonomyi

Protein namesi
Recommended name:
Nucleoprotein
Alternative name(s):
Nucleocapsid protein
Short name:
Protein N
Gene namesi
Name:N
OrganismiRift valley fever virus (strain ZH-548 M12) (RVFV)
Taxonomic identifieri11589 [NCBI]
Taxonomic lineageiVirusesssRNA negative-strand virusesBunyaviridaePhlebovirus
Virus hostiAedes [TaxID: 7158]
Bos taurus (Bovine) [TaxID: 9913]
Bos taurus x Bison bison (beefalo) [TaxID: 297284]
Camelus bactrianus (Bactrian camel) [TaxID: 9837]
Capra hircus (Goat) [TaxID: 9925]
Homo sapiens (Human) [TaxID: 9606]
Ovis aries (Sheep) [TaxID: 9940]
Phlebotomus papatasi (Sandfly) [TaxID: 29031]
ProteomesiUP000002477: Genome

Subcellular locationi

Virion
Note: Internal protein of virus particle.

GO - Cellular componenti

  1. helical viral capsid Source: UniProtKB-KW
  2. ribonucleoprotein complex Source: UniProtKB-KW
  3. viral nucleocapsid Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Capsid protein, Helical capsid protein, Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 245245NucleoproteinPRO_0000221995Add
BLAST

Structurei

Secondary structure

1
245
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi4 – 1310
Helixi18 – 2811
Helixi35 – 4612
Helixi47 – 493
Helixi50 – 6314
Helixi68 – 714
Helixi72 – 743
Helixi77 – 9014
Beta strandi94 – 963
Helixi104 – 1107
Helixi112 – 12211
Helixi123 – 1253
Beta strandi126 – 1283
Helixi130 – 1367
Helixi142 – 1443
Helixi147 – 1526
Helixi159 – 18022
Helixi182 – 1843
Helixi189 – 20416
Beta strandi207 – 2093
Helixi211 – 22010
Helixi232 – 24312

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3OUOX-ray2.30A/B/C1-245[»]
3OV9X-ray1.60A/B/C1-245[»]
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP21700.

Family & Domainsi

Sequence similaritiesi

Family and domain databases

InterProiIPR009522. Capsid_Phlebovir/Tenuivir.
IPR015971. Nucleocapsid_Phlebovirus.
[Graphical view]
PfamiPF05733. Tenui_N. 1 hit.
[Graphical view]
PIRSFiPIRSF003953. N_PhelboV. 1 hit.

Sequencei

Sequence statusi: Complete.

P21700-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MDNYQELRVQ FAAQAVDRNE IEQWVREFAY QGFDARRVIE LLKQYGGADW
60 70 80 90 100
EKDAKKMIVL ALTRGNKPRR MMMKMSKEGK ATVEALINKY KLKEGNPSRD
110 120 130 140 150
ELTLSRVAAA LAGWTCQALV VLSEWLPVTG TTMDGLSPAY PRHMMHPSFA
160 170 180 190 200
GMVDPSLPGD YLRAILDAHS LYLLQFSRVI NPNLRGRTKE EVAATFTQPM
210 220 230 240
NAAVNSNFIS HEKRREFLKA FGLVDSNGKP SAAVMAAAQA YKTAA
Length:245
Mass (Da):27,431
Last modified:May 1, 1991 - v1
Checksum:i8B6190549F4A6FF5
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X53771 Genomic RNA. Translation: CAA37789.1.
PIRiD38552. VHVURV.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X53771 Genomic RNA. Translation: CAA37789.1 .
PIRi D38552. VHVURV.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
3OUO X-ray 2.30 A/B/C 1-245 [» ]
3OV9 X-ray 1.60 A/B/C 1-245 [» ]
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Miscellaneous databases

EvolutionaryTracei P21700.

Family and domain databases

InterProi IPR009522. Capsid_Phlebovir/Tenuivir.
IPR015971. Nucleocapsid_Phlebovirus.
[Graphical view ]
Pfami PF05733. Tenui_N. 1 hit.
[Graphical view ]
PIRSFi PIRSF003953. N_PhelboV. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Sequences and coding strategies of the S RNAs of Toscana and Rift Valley fever viruses compared to those of Punta Toro, Sicilian Sandfly fever, and Uukuniemi viruses."
    Giorgi C., Accardi L., Nicoletti L., Gro M.C., Takehara K., Hilditch C., Morikawa S., Bishop D.H.L.
    Virology 180:738-753(1991) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Entry informationi

Entry nameiNCAP_RVFVZ
AccessioniPrimary (citable) accession number: P21700
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 1, 1991
Last sequence update: May 1, 1991
Last modified: October 1, 2014
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3