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Protein

NAD(+) kinase

Gene

UTR1

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: Annotation score: 5 out of 5-Experimental evidence at protein leveli

Functioni

Specifically phosphorylates NAD in the presence of ATP, dATP, or CTP as phosphoryl donors.1 Publication

Catalytic activityi

ATP + NAD+ = ADP + NADP+.

Kineticsi

  1. KM=0.50 mM for NAD1 Publication
  2. KM=0.60 mM for ATP1 Publication

pH dependencei

Optimum pH is 8.0.1 Publication

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. NAD+ kinase activity Source: SGD
  3. NADH kinase activity Source: SGD

GO - Biological processi

  1. cellular iron ion homeostasis Source: SGD
  2. NAD metabolic process Source: InterPro
  3. NADP biosynthetic process Source: SGD
Complete GO annotation...

Keywords - Molecular functioni

Kinase, Transferase

Keywords - Ligandi

ATP-binding, NAD, NADP, Nucleotide-binding

Enzyme and pathway databases

BioCyciMetaCyc:G3O-31684-MONOMER.
YEAST:G3O-31684-MONOMER.
BRENDAi2.7.1.23. 984.
ReactomeiREACT_254834. Nicotinate metabolism.

Names & Taxonomyi

Protein namesi
Recommended name:
NAD(+) kinase (EC:2.7.1.23)
Alternative name(s):
Unknown transcript 1 protein
Gene namesi
Name:UTR1
Ordered Locus Names:YJR049C
ORF Names:J1655
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
ProteomesiUP000002311: Chromosome X

Organism-specific databases

CYGDiYJR049c.
SGDiS000003810. UTR1.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 530530NAD(+) kinasePRO_0000120716Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei499 – 4991Phosphoserine2 Publications
Modified residuei503 – 5031Phosphoserine2 Publications

Keywords - PTMi

Phosphoprotein

Proteomic databases

MaxQBiP21373.
PaxDbiP21373.

Expressioni

Gene expression databases

GenevestigatoriP21373.

Interactioni

Subunit structurei

Homohexamer.1 Publication

Protein-protein interaction databases

BioGridi33802. 62 interactions.
DIPiDIP-4479N.
IntActiP21373. 4 interactions.
MINTiMINT-549835.

Structurei

3D structure databases

ProteinModelPortaliP21373.
SMRiP21373. Positions 128-444.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the NAD kinase family.Curated

Phylogenomic databases

eggNOGiCOG0061.
GeneTreeiENSGT00390000013792.
HOGENOMiHOG000176769.
InParanoidiP21373.
KOiK00858.
OMAiIHNKLYC.
OrthoDBiEOG72VHFZ.

Family and domain databases

Gene3Di2.60.200.30. 1 hit.
3.40.50.10330. 1 hit.
HAMAPiMF_00361. NAD_kinase.
InterProiIPR017438. ATP-NAD_kinase_dom_1.
IPR016064. ATP-NAD_kinase_PpnK-typ.
IPR017437. ATP-NAD_kinase_PpnK-typ_all-b.
IPR002504. PolyP/ATP_NADK.
[Graphical view]
PANTHERiPTHR20275. PTHR20275. 1 hit.
PfamiPF01513. NAD_kinase. 1 hit.
[Graphical view]
SUPFAMiSSF111331. SSF111331. 1 hit.

Sequencei

Sequence statusi: Complete.

P21373-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKENDMNNGV DKWVNEEDGR NDHHNNNNNL MKKAMMNNEQ IDRTQDIDNA
60 70 80 90 100
KEMLRKISSE SSSRRSSLLN KDSSLVNGNA NSGGGTSING TRGSSKSSNT
110 120 130 140 150
HFQYASTAYG VRMLSKDISN TKVELDVENL MIVTKLNDVS LYFLTRELVE
160 170 180 190 200
WVLVHFPRVT VYVDSELKNS KKFAAGELCE DSKCRESRIK YWTKDFIREH
210 220 230 240 250
DVFFDLVVTL GGDGTVLFVS SIFQRHVPPV MSFSLGSLGF LTNFKFEHFR
260 270 280 290 300
EDLPRIMNHK IKTNLRLRLE CTIYRRHRPE VDPNTGKKIC VVEKLSTHHI
310 320 330 340 350
LNEVTIDRGP SPFLSMLELY GDGSLMTVAQ ADGLIAATPT GSTAYSLSAG
360 370 380 390 400
GSLVCPTVNA IALTPICPHA LSFRPIILPE SINLKVKVSM KSRAPAWAAF
410 420 430 440 450
DGKDRIELQK GDFITICASP YAFPTVEASP DEFINSISRQ LNWNVREQQK
460 470 480 490 500
SFTHILSQKN QEKYAHEANK VRNQAEPLEV IRDKYSLEAD ATKENNNGSD
510 520 530
DESDDESVNC EACKLKPSSV PKPSQARFSV
Length:530
Mass (Da):59,469
Last modified:February 1, 1995 - v2
Checksum:i1BF4F01D7213B94B
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti337 – 3371A → V in AAT92918. (PubMed:17322287)Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB044344 Genomic DNA. Translation: BAB83863.1.
L26347 Genomic DNA. Translation: AAA62857.1.
L36344 Genomic DNA. Translation: AAA88752.1.
M37696 Genomic DNA. No translation available.
Z49549 Genomic DNA. Translation: CAA89577.1.
AY692899 Genomic DNA. Translation: AAT92918.1.
BK006943 Genomic DNA. Translation: DAA08836.1.
PIRiS46589.
RefSeqiNP_012583.1. NM_001181707.1.

Genome annotation databases

EnsemblFungiiYJR049C; YJR049C; YJR049C.
GeneIDi853508.
KEGGisce:YJR049C.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB044344 Genomic DNA. Translation: BAB83863.1.
L26347 Genomic DNA. Translation: AAA62857.1.
L36344 Genomic DNA. Translation: AAA88752.1.
M37696 Genomic DNA. No translation available.
Z49549 Genomic DNA. Translation: CAA89577.1.
AY692899 Genomic DNA. Translation: AAT92918.1.
BK006943 Genomic DNA. Translation: DAA08836.1.
PIRiS46589.
RefSeqiNP_012583.1. NM_001181707.1.

3D structure databases

ProteinModelPortaliP21373.
SMRiP21373. Positions 128-444.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi33802. 62 interactions.
DIPiDIP-4479N.
IntActiP21373. 4 interactions.
MINTiMINT-549835.

Proteomic databases

MaxQBiP21373.
PaxDbiP21373.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiYJR049C; YJR049C; YJR049C.
GeneIDi853508.
KEGGisce:YJR049C.

Organism-specific databases

CYGDiYJR049c.
SGDiS000003810. UTR1.

Phylogenomic databases

eggNOGiCOG0061.
GeneTreeiENSGT00390000013792.
HOGENOMiHOG000176769.
InParanoidiP21373.
KOiK00858.
OMAiIHNKLYC.
OrthoDBiEOG72VHFZ.

Enzyme and pathway databases

BioCyciMetaCyc:G3O-31684-MONOMER.
YEAST:G3O-31684-MONOMER.
BRENDAi2.7.1.23. 984.
ReactomeiREACT_254834. Nicotinate metabolism.

Miscellaneous databases

NextBioi974165.

Gene expression databases

GenevestigatoriP21373.

Family and domain databases

Gene3Di2.60.200.30. 1 hit.
3.40.50.10330. 1 hit.
HAMAPiMF_00361. NAD_kinase.
InterProiIPR017438. ATP-NAD_kinase_dom_1.
IPR016064. ATP-NAD_kinase_PpnK-typ.
IPR017437. ATP-NAD_kinase_PpnK-typ_all-b.
IPR002504. PolyP/ATP_NADK.
[Graphical view]
PANTHERiPTHR20275. PTHR20275. 1 hit.
PfamiPF01513. NAD_kinase. 1 hit.
[Graphical view]
SUPFAMiSSF111331. SSF111331. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Molecular cloning and identification of UTR1 of a yeast Saccharomyces cerevisiae as a gene encoding an NAD kinase."
    Kawai S., Mori S., Suzuki S., Murata K.
    FEMS Microbiol. Lett. 200:181-184(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], FUNCTION, BIOPHYSICOCHEMICAL PROPERTIES, SUBUNIT.
  2. "Nucleotide sequence of the COR region: a cluster of six genes in the yeast Saccharomyces cerevisiae."
    Melnick L., Sherman F.
    Gene 87:157-166(1990) [PubMed] [Europe PMC] [Abstract]
    Cited for: PRELIMINARY NUCLEOTIDE SEQUENCE.
  3. "Revised nucleotide sequence of the COR region of yeast Saccharomyces cerevisiae chromosome X."
    Huang M.-E., Manus V., Chuat J.-C., Galibert F.
    Yeast 10:811-818(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  4. "Complete nucleotide sequence of Saccharomyces cerevisiae chromosome X."
    Galibert F., Alexandraki D., Baur A., Boles E., Chalwatzis N., Chuat J.-C., Coster F., Cziepluch C., de Haan M., Domdey H., Durand P., Entian K.-D., Gatius M., Goffeau A., Grivell L.A., Hennemann A., Herbert C.J., Heumann K.
    , Hilger F., Hollenberg C.P., Huang M.-E., Jacq C., Jauniaux J.-C., Katsoulou C., Kirchrath L., Kleine K., Kordes E., Koetter P., Liebl S., Louis E.J., Manus V., Mewes H.-W., Miosga T., Obermaier B., Perea J., Pohl T.M., Portetelle D., Pujol A., Purnelle B., Ramezani Rad M., Rasmussen S.W., Rose M., Rossau R., Schaaff-Gerstenschlaeger I., Smits P.H.M., Scarcez T., Soriano N., To Van D., Tzermia M., Van Broekhoven A., Vandenbol M., Wedler H., von Wettstein D., Wambutt R., Zagulski M., Zollner A., Karpfinger-Hartl L.
    EMBO J. 15:2031-2049(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  5. Cited for: GENOME REANNOTATION.
    Strain: ATCC 204508 / S288c.
  6. Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  7. Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
  8. "Analysis of phosphorylation sites on proteins from Saccharomyces cerevisiae by electron transfer dissociation (ETD) mass spectrometry."
    Chi A., Huttenhower C., Geer L.Y., Coon J.J., Syka J.E.P., Bai D.L., Shabanowitz J., Burke D.J., Troyanskaya O.G., Hunt D.F.
    Proc. Natl. Acad. Sci. U.S.A. 104:2193-2198(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  9. "A multidimensional chromatography technology for in-depth phosphoproteome analysis."
    Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.
    Mol. Cell. Proteomics 7:1389-1396(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-499 AND SER-503, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  10. "Global analysis of Cdk1 substrate phosphorylation sites provides insights into evolution."
    Holt L.J., Tuch B.B., Villen J., Johnson A.D., Gygi S.P., Morgan D.O.
    Science 325:1682-1686(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-499 AND SER-503, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  11. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiUTR1_YEAST
AccessioniPrimary (citable) accession number: P21373
Secondary accession number(s): D6VWM0, E9P8Y8, Q54AD8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 1, 1991
Last sequence update: February 1, 1995
Last modified: January 7, 2015
This is version 126 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Miscellaneous

Present with 5040 molecules/cell in log phase SD medium.1 Publication

Caution

Was briefly thought to be FRE2.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  3. Yeast chromosome X
    Yeast (Saccharomyces cerevisiae) chromosome X: entries and gene names

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.