Reviewed, UniProtKB/Swiss-Prot P21363 (YCIE_ECOLI)

Names and origin

Protein names

Recommended name:
    Protein yciE

Gene names

Name:	yciE
Ordered Locus Names:	b1257, JW1249

Organism

Escherichia coli (strain K12) [Complete proteome] [HAMAP]

Taxonomic identifier

83333 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia

Protein attributes

Sequence length	168 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

Ontologies

Keywords
Technical term	Complete proteome Direct protein sequencing
Gene Ontology (GO)
Molecular function	oxidoreductase activity Inferred from electronic annotation. Source: InterPro protein binding Inferred from physical interaction. Source: IntAct transition metal ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Binary interactions

With	Entry	#Exp.	IntAct	Notes
nadE	P18843	1	EBI-1123081,EBI-548960

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 168	168	Protein yciE		PRO_0000168873

Sequences

	Sequence		Length	Mass (Da)
	P21363-1 [UniParc]. Last modified May 1, 1991. Version 1. Checksum: 1EC2815147CB114D	FASTA	168	18,961
	10 20 30 40 50 60 MNRIEHYHDW LRDAHAMEKQ AESMLESMAS RIDNYPELRA RIEQHLSETK NQIVQLETIL 70 80 90 100 110 120 DRNDISRSVI KDSMSKMAAL GQSIGGIFPS DEIVKGSISG YVFEQFEIAC YTSLLAAAKN 130 140 150 160 AGDTASIPTI EAILNEEKQM ADWLIQNIPQ TTEKFLIRSE TDGVEAKK

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Molecular evolution of the Escherichia coli chromosome. I. Analysis of structure and natural variation in a previously uncharacterized region between trp and tonB." Stoltzfus A., Leslie J.F., Milkman R. Genetics 120:345-358(1988) [PubMed: 3058546] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: K12.
[2]	Milkman R. Submitted (APR-1995) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: K12 and Various ECOR strains.
[3]	"A 570-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 28.0-40.1 min region on the linkage map." Aiba H., Baba T., Fujita K., Hayashi K., Inada T., Isono K., Itoh T., Kasai H., Kashimoto K., Kimura S., Kitakawa M., Kitagawa M., Makino K., Miki T., Mizobuchi K., Mori H., Mori T., Motomura K. , Nakade S., Nakamura Y., Nashimoto H., Nishio Y., Oshima T., Saito N., Sampei G., Seki Y., Sivasundaram S., Tagami H., Takeda J., Takemoto K., Takeuchi Y., Wada C., Yamamoto Y., Horiuchi T. DNA Res. 3:363-377(1996) [PubMed: 9097039] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
[4]	"The complete genome sequence of Escherichia coli K-12." Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y. Science 277:1453-1474(1997) [PubMed: 9278503] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / MG1655 / ATCC 47076.
[5]	"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110." Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T. Mol. Syst. Biol. 2:E1-E5(2006) [PubMed: 16738553] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
[6]	"Function of the Escherichia coli nucleoid protein, H-NS: molecular analysis of a subset of proteins whose expression is enhanced in a hns deletion mutant." Yoshida T., Ueguchi C., Yamada H., Mizuno T. Mol. Gen. Genet. 237:113-122(1993) [PubMed: 8455549] [Abstract] Cited for: PROTEIN SEQUENCE OF 1-20. Strain: K12.

Cross-references

Sequence databases
EMBLGenBankDDBJ	X13583 Genomic DNA. Translation: CAA31921.1. U23489 Genomic DNA. Translation: AAB60038.1. U00096 Genomic DNA. Translation: AAC74339.1. AP009048 Genomic DNA. Translation: BAA14789.1. U25417 Genomic DNA. Translation: AAA73794.1. U25418 Genomic DNA. Translation: AAA73800.1. U25419 Genomic DNA. Translation: AAA73806.1. U25420 Genomic DNA. Translation: AAA73812.1. U25422 Genomic DNA. Translation: AAA73824.1. U23490 Genomic DNA. Translation: AAA65143.1. U23491 Genomic DNA. Translation: AAA65149.1. U23492 Genomic DNA. Translation: AAA65155.1.
PIR	S07796.
RefSeq	AP_001883.1. NP_415773.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
DIP	DIP:11579N.
IntAct	P21363. 4 interactions.
Genome annotation databases
GeneID	946871.
GenomeReviews	Gene locus JW1249 in contig AP009048_GR. Gene locus b1257 in contig U00096_GR.
KEGG	ecj:JW1249. eco:b1257.
Organism-specific databases
EchoBASE	EB1115.
EcoGene	EG11125. yciE.
CMR	Search...
Phylogenomic databases
HOGENOM	P21363.
OMA	P21363. PAQDEIL.
Enzyme and pathway databases
BioCyc	EcoCyc:EG11125-MON.
Family and domain databases
InterPro	IPR010287. DUF892. [Graphical view]
Pfam	PF05974. DUF892. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

YCIE_ECOLI

Accession

Primary (citable) accession number: P21363

Entry history

Integrated into UniProtKB/Swiss-Prot:	May 1, 1991
Last sequence update:	May 1, 1991
Last modified:	June 16, 2009
This is version 65 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)