##gff-version 3 P20875 UniProtKB Initiator methionine 1 1 . . . Note=Removed%3B by host;Ontology_term=ECO:0000250;evidence=ECO:0000250 P20875 UniProtKB Chain 2 1439 . . . ID=PRO_0000261269;Note=Gag-Pol polyprotein P20875 UniProtKB Chain 2 132 . . . ID=PRO_0000042344;Note=Matrix protein p17;Ontology_term=ECO:0000250;evidence=ECO:0000250 P20875 UniProtKB Chain 133 363 . . . ID=PRO_0000042345;Note=Capsid protein p24;Ontology_term=ECO:0000250;evidence=ECO:0000250 P20875 UniProtKB Peptide 364 377 . . . ID=PRO_0000042346;Note=Spacer peptide 1;Ontology_term=ECO:0000250;evidence=ECO:0000250 P20875 UniProtKB Chain 378 432 . . . ID=PRO_0000042347;Note=Nucleocapsid protein p7;Ontology_term=ECO:0000250;evidence=ECO:0000250 P20875 UniProtKB Peptide 433 440 . . . ID=PRO_0000246718;Note=Transframe peptide;Ontology_term=ECO:0000255;evidence=ECO:0000255 P20875 UniProtKB Chain 441 492 . . . ID=PRO_0000042348;Note=P6-pol;Ontology_term=ECO:0000255;evidence=ECO:0000255 P20875 UniProtKB Chain 493 591 . . . ID=PRO_0000038654;Note=Protease;Ontology_term=ECO:0000250;evidence=ECO:0000250 P20875 UniProtKB Chain 592 1151 . . . ID=PRO_0000042349;Note=Reverse transcriptase/ribonuclease H;Ontology_term=ECO:0000250;evidence=ECO:0000250 P20875 UniProtKB Chain 592 1031 . . . ID=PRO_0000042350;Note=P51 RT;Ontology_term=ECO:0000250;evidence=ECO:0000250 P20875 UniProtKB Chain 1032 1151 . . . ID=PRO_0000042351;Note=P15;Ontology_term=ECO:0000250;evidence=ECO:0000250 P20875 UniProtKB Chain 1152 1439 . . . ID=PRO_0000042352;Note=Integrase;Ontology_term=ECO:0000250;evidence=ECO:0000250 P20875 UniProtKB Domain 512 581 . . . Note=Peptidase A2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00275 P20875 UniProtKB Domain 635 825 . . . Note=Reverse transcriptase;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00405 P20875 UniProtKB Domain 1025 1148 . . . Note=RNase H type-1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00408 P20875 UniProtKB Domain 1205 1355 . . . Note=Integrase catalytic;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00457 P20875 UniProtKB Zinc finger 390 407 . . . Note=CCHC-type 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00047 P20875 UniProtKB Zinc finger 411 428 . . . Note=CCHC-type 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00047 P20875 UniProtKB Zinc finger 1154 1195 . . . Note=Integrase-type;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00450 P20875 UniProtKB DNA binding 1374 1421 . . . Note=Integrase-type;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00506 P20875 UniProtKB Region 7 31 . . . Note=Interaction with Gp41;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P12497 P20875 UniProtKB Region 8 43 . . . Note=Interaction with host CALM1;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P04585 P20875 UniProtKB Region 12 19 . . . Note=Interaction with host AP3D1;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P12497 P20875 UniProtKB Region 14 33 . . . Note=Interaction with membrane phosphatidylinositol 4%2C5-bisphosphate and RNA;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P12497 P20875 UniProtKB Region 73 77 . . . Note=Interaction with membrane phosphatidylinositol 4%2C5-bisphosphate;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P12497 P20875 UniProtKB Region 106 128 . . . Note=Disordered;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite P20875 UniProtKB Region 189 227 . . . Note=Interaction with human PPIA/CYPA and NUP153;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P12497 P20875 UniProtKB Region 277 363 . . . Note=Dimerization/Multimerization of capsid protein p24;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P04585 P20875 UniProtKB Region 493 497 . . . Note=Dimerization of protease;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P04585 P20875 UniProtKB Region 541 547 . . . Note=Dimerization of protease;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P04585 P20875 UniProtKB Region 580 592 . . . Note=Dimerization of protease;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P04585 P20875 UniProtKB Region 818 826 . . . Note=RT 'primer grip';Ontology_term=ECO:0000250;evidence=ECO:0000250 P20875 UniProtKB Motif 16 22 . . . Note=Nuclear export signal;Ontology_term=ECO:0000250;evidence=ECO:0000250 P20875 UniProtKB Motif 26 32 . . . Note=Nuclear localization signal;Ontology_term=ECO:0000250;evidence=ECO:0000250 P20875 UniProtKB Motif 989 1005 . . . Note=Tryptophan repeat motif;Ontology_term=ECO:0000250;evidence=ECO:0000250 P20875 UniProtKB Compositional bias 113 128 . . . Note=Polar residues;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite P20875 UniProtKB Active site 517 517 . . . Note=For protease activity%3B shared with dimeric partner;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU10094 P20875 UniProtKB Binding site 701 701 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250 P20875 UniProtKB Binding site 776 776 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250 P20875 UniProtKB Binding site 777 777 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250 P20875 UniProtKB Binding site 1034 1034 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250 P20875 UniProtKB Binding site 1069 1069 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250 P20875 UniProtKB Binding site 1089 1089 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250 P20875 UniProtKB Binding site 1140 1140 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250 P20875 UniProtKB Binding site 1163 1163 . . . Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00450 P20875 UniProtKB Binding site 1167 1167 . . . Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00450 P20875 UniProtKB Binding site 1191 1191 . . . Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00450 P20875 UniProtKB Binding site 1194 1194 . . . Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00450 P20875 UniProtKB Binding site 1215 1215 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250 P20875 UniProtKB Binding site 1267 1267 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250 P20875 UniProtKB Binding site 1303 1303 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P04585 P20875 UniProtKB Site 132 133 . . . Note=Cleavage%3B by viral protease;Ontology_term=ECO:0000250;evidence=ECO:0000250 P20875 UniProtKB Site 221 222 . . . Note=Cis/trans isomerization of proline peptide bond%3B by human PPIA/CYPA;Ontology_term=ECO:0000250;evidence=ECO:0000250 P20875 UniProtKB Site 363 364 . . . Note=Cleavage%3B by viral protease;Ontology_term=ECO:0000250;evidence=ECO:0000250 P20875 UniProtKB Site 377 378 . . . Note=Cleavage%3B by viral protease;Ontology_term=ECO:0000250;evidence=ECO:0000250 P20875 UniProtKB Site 432 433 . . . Note=Cleavage%3B by viral protease;Ontology_term=ECO:0000255;evidence=ECO:0000255 P20875 UniProtKB Site 440 441 . . . Note=Cleavage%3B by viral protease;Ontology_term=ECO:0000250;evidence=ECO:0000250 P20875 UniProtKB Site 492 493 . . . Note=Cleavage%3B by viral protease;Ontology_term=ECO:0000250;evidence=ECO:0000250 P20875 UniProtKB Site 591 592 . . . Note=Cleavage%3B by viral protease;Ontology_term=ECO:0000250;evidence=ECO:0000250 P20875 UniProtKB Site 992 992 . . . Note=Essential for RT p66/p51 heterodimerization;Ontology_term=ECO:0000250;evidence=ECO:0000250 P20875 UniProtKB Site 1005 1005 . . . Note=Essential for RT p66/p51 heterodimerization;Ontology_term=ECO:0000250;evidence=ECO:0000250 P20875 UniProtKB Site 1031 1032 . . . Note=Cleavage%3B by viral protease%3B partial;Ontology_term=ECO:0000250;evidence=ECO:0000250 P20875 UniProtKB Site 1151 1152 . . . Note=Cleavage%3B by viral protease;Ontology_term=ECO:0000250;evidence=ECO:0000250 P20875 UniProtKB Modified residue 132 132 . . . Note=Phosphotyrosine%3B by host;Ontology_term=ECO:0000250;evidence=ECO:0000250 P20875 UniProtKB Lipidation 2 2 . . . Note=N-myristoyl glycine%3B by host;Ontology_term=ECO:0000250;evidence=ECO:0000250 P20875 UniProtKB Beta strand 129 131 . . . Ontology_term=ECO:0007829;evidence=ECO:0007829|PDB:1KJ4