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Protein

Cytochrome P450 2C13, male-specific

Gene

Cyp2c13

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 5 out of 5-Experimental evidence at protein leveli

Functioni

Cytochromes P450 are a group of heme-thiolate monooxygenases. In liver microsomes, this enzyme is involved in an NADPH-dependent electron transport pathway. It oxidizes a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics.

Catalytic activityi

RH + [reduced NADPH--hemoprotein reductase] + O2 = ROH + [oxidized NADPH--hemoprotein reductase] + H2O.

Cofactori

hemeBy similarity

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi435Iron (heme axial ligand)1

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Monooxygenase, Oxidoreductase

Keywords - Ligandi

Heme, Iron, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Cytochrome P450 2C13, male-specific (EC:1.14.14.1)
Alternative name(s):
CYPIIC13
Cytochrome P-450g
Cytochrome P450-G
Cytochrome P450-UT-5
Gene namesi
Name:Cyp2c13
Synonyms:Cyp2c-13
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Unplaced

Organism-specific databases

RGDi620363. Cyp2c13.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Endoplasmic reticulum, Membrane, Microsome

Pathology & Biotechi

Chemistry databases

ChEMBLiCHEMBL3509596.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000517031 – 490Cytochrome P450 2C13, male-specificAdd BLAST490

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei249N6-acetyllysineBy similarity1
Modified residuei375N6-acetyllysineBy similarity1

Keywords - PTMi

Acetylation

Proteomic databases

PaxDbiP20814.
PRIDEiP20814.

Expressioni

Tissue specificityi

Liver, and to a lesser extent in prostate, kidney, heart and brain.

Inductioni

P450 can be induced to high levels in liver and other tissues by various foreign compounds, including drugs, pesticides, and carcinogens.

Interactioni

Protein-protein interaction databases

MINTiMINT-4564628.
STRINGi10116.ENSRNOP00000067531.

Structurei

3D structure databases

ProteinModelPortaliP20814.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the cytochrome P450 family.Curated

Phylogenomic databases

eggNOGiKOG0156. Eukaryota.
COG2124. LUCA.
HOVERGENiHBG015789.
InParanoidiP20814.
KOiK07413.
PhylomeDBiP20814.

Family and domain databases

Gene3Di1.10.630.10. 1 hit.
InterProiIPR001128. Cyt_P450.
IPR017972. Cyt_P450_CS.
IPR002401. Cyt_P450_E_grp-I.
[Graphical view]
PfamiPF00067. p450. 1 hit.
[Graphical view]
PRINTSiPR00463. EP450I.
PR00385. P450.
SUPFAMiSSF48264. SSF48264. 1 hit.
PROSITEiPS00086. CYTOCHROME_P450. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P20814-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDPVVVLLLS LFFLLFLSLW RPSSGRGKLP PGPTPLPIIG NFFQVDMKDI
60 70 80 90 100
RQSLTNFSKT YGPVYTLYVG SQPTVVLHGY EALKEALVDH GEEFSGRGRL
110 120 130 140 150
PICEKVAKGQ GIAFSHGNVW KATRHFTVKT LRNLGMGKGT IEDKVQEEAK
160 170 180 190 200
WLVKELKKTN GSPCDPQFIM GCAPGNVICS IILQNRFDYE DKDFLNLIEK
210 220 230 240 250
VNEAVKIISS PGIQVFNIFP ILLDYCPGNH NIYFKNHTWL KSYLLEKIKE
260 270 280 290 300
HEESLDVSNP RDFIDYFLIE RNQENANQWM NYTLEHLAIM VTDLFFAGIE
310 320 330 340 350
TVSSTMRFAL LLLMKYPHVT AKVQEEIDHV IGRHRSPCMQ DRSHMPYTNA
360 370 380 390 400
MVHEVQRYID IGPNGLLHEV TCDTKFRNYF IPKGTAVLTS LTSVLHDSKE
410 420 430 440 450
FPNPEMFDPG HFLDENGNFK KSDYFIPFSA GKRMCLGESL ARMELFLFLT
460 470 480 490
TILQNFKLKS LVDPKDINTT PICSSLSSVP PTFQMRFIPL
Length:490
Mass (Da):55,860
Last modified:February 1, 1991 - v1
Checksum:iF585891A7BB9F536
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti353H → Q in AAA41059 (Ref. 3) Curated1

Natural variant

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Natural varianti22P → L in G- phenotype. 1
Natural varianti180S → C in G- phenotype. 1
Natural varianti234F → L in G- phenotype. 1
Natural varianti237H → Y in G- phenotype. 1
Natural varianti240L → V in G- phenotype. 1
Natural varianti338C → S in G- phenotype. 1
Natural varianti369E → D in G- phenotype. 1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
J02861 mRNA. Translation: AAA41785.1.
M33994 mRNA. Translation: AAA41063.1.
M82855
, M82849, M82850, M82846, M82848, M82853, M82851, M82852 Genomic DNA. Translation: AAA41059.1.
M32277 mRNA. Translation: AAA41031.1.
PIRiA36122.
I52410.
RefSeqiNP_612523.1. NM_138514.1.
UniGeneiRn.82715.

Genome annotation databases

GeneIDi171521.
KEGGirno:171521.

Keywords - Coding sequence diversityi

Polymorphism

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
J02861 mRNA. Translation: AAA41785.1.
M33994 mRNA. Translation: AAA41063.1.
M82855
, M82849, M82850, M82846, M82848, M82853, M82851, M82852 Genomic DNA. Translation: AAA41059.1.
M32277 mRNA. Translation: AAA41031.1.
PIRiA36122.
I52410.
RefSeqiNP_612523.1. NM_138514.1.
UniGeneiRn.82715.

3D structure databases

ProteinModelPortaliP20814.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

MINTiMINT-4564628.
STRINGi10116.ENSRNOP00000067531.

Chemistry databases

ChEMBLiCHEMBL3509596.

Proteomic databases

PaxDbiP20814.
PRIDEiP20814.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi171521.
KEGGirno:171521.

Organism-specific databases

CTDi171521.
RGDi620363. Cyp2c13.

Phylogenomic databases

eggNOGiKOG0156. Eukaryota.
COG2124. LUCA.
HOVERGENiHBG015789.
InParanoidiP20814.
KOiK07413.
PhylomeDBiP20814.

Miscellaneous databases

PROiP20814.

Family and domain databases

Gene3Di1.10.630.10. 1 hit.
InterProiIPR001128. Cyt_P450.
IPR017972. Cyt_P450_CS.
IPR002401. Cyt_P450_E_grp-I.
[Graphical view]
PfamiPF00067. p450. 1 hit.
[Graphical view]
PRINTSiPR00463. EP450I.
PR00385. P450.
SUPFAMiSSF48264. SSF48264. 1 hit.
PROSITEiPS00086. CYTOCHROME_P450. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiCP2CD_RAT
AccessioniPrimary (citable) accession number: P20814
Secondary accession number(s): P22693, Q64587
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1991
Last sequence update: February 1, 1991
Last modified: October 5, 2016
This is version 129 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Miscellaneous

The G- form of this protein is thought to be unexpressed.

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.