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Protein

Ig lambda-2 chain C region

Gene
N/A
Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Recommended name:
Ig lambda-2 chain C region
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 11

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_0000153616‹1 – 104Ig lambda-2 chain C regionAdd BLAST›104

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi27 ↔ 85PROSITE-ProRule annotation
Disulfide bondi103Interchain (with heavy chain)PROSITE-ProRule annotation

Keywords - PTMi

Disulfide bond

Proteomic databases

PRIDEiP20767.

Expressioni

Gene expression databases

BgeeiENSRNOG00000050000.
GenevisibleiP20767. RN.

Interactioni

GO - Molecular functioni

Structurei

3D structure databases

ProteinModelPortaliP20767.
SMRiP20767.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini6 – 99Ig-likeAdd BLAST94

Keywords - Domaini

Immunoglobulin C region, Immunoglobulin domain

Phylogenomic databases

GeneTreeiENSGT00730000110696.
HOGENOMiHOG000171113.
HOVERGENiHBG039526.
OMAiPSDWKLS.
OrthoDBiEOG091G0XV9.
PhylomeDBiP20767.

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
InterProiView protein in InterPro
IPR007110. Ig-like_dom.
IPR036179. Ig-like_dom_sf.
IPR013783. Ig-like_fold.
IPR003006. Ig/MHC_CS.
IPR003597. Ig_C1-set.
PfamiView protein in Pfam
PF07654. C1-set. 1 hit.
SMARTiView protein in SMART
SM00407. IGc1. 1 hit.
SUPFAMiSSF48726. SSF48726. 1 hit.
PROSITEiView protein in PROSITE
PS50835. IG_LIKE. 1 hit.
PS00290. IG_MHC. 1 hit.

Sequencei

Sequence statusi: Complete.

P20767-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
QPKSTPTLTV FPPSTEELQG NKATLVCLIS DFYPSDVEVA WKANGAPISQ
60 70 80 90 100
GVDTANPTKQ GNKYIASSFL RLTAEQWRSR NSFTCQVTHE GNTVEKSLSP

AECV
Length:104
Mass (Da):11,318
Last modified:February 1, 1991 - v1
Checksum:iF087906DE43F7276
GO

Sequence cautioni

P20767: The sequence AAA41420 differs from that shown. Reason: Erroneous initiation.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei11

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M22521 Genomic DNA. Translation: AAA41420.1. Different initiation.
PIRiB27390.
UniGeneiRn.114048.
Rn.129.
Rn.170503.
Rn.200541.
Rn.200543.
Rn.201233.

Genome annotation databases

EnsembliENSRNOT00000057971; ENSRNOP00000054780; ENSRNOG00000050000.

Similar proteinsi

Entry informationi

Entry nameiLAC2_RAT
AccessioniPrimary (citable) accession number: P20767
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 1, 1991
Last sequence update: February 1, 1991
Last modified: October 25, 2017
This is version 102 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome