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Protein

Uncharacterized protein PA1000

Gene

PA1000

Organism
Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

  • secondary metabolite biosynthetic process Source: PseudoCAP
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein PA1000
Gene namesi
Ordered Locus Names:PA1000
OrganismiPseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
Taxonomic identifieri208964 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000002438 Componenti: Chromosome

Organism-specific databases

PseudoCAPiPA1000.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 301301Uncharacterized protein PA1000PRO_0000206249Add
BLAST

Proteomic databases

PaxDbiP20581.

Interactioni

Protein-protein interaction databases

STRINGi208964.PA1000.

Structurei

Secondary structure

1
301
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi2 – 43Combined sources
Beta strandi6 – 116Combined sources
Beta strandi14 – 185Combined sources
Beta strandi24 – 307Combined sources
Beta strandi33 – 375Combined sources
Helixi42 – 443Combined sources
Helixi45 – 5511Combined sources
Helixi59 – 613Combined sources
Beta strandi62 – 665Combined sources
Turni72 – 776Combined sources
Helixi78 – 814Combined sources
Helixi82 – 843Combined sources
Beta strandi89 – 935Combined sources
Helixi94 – 996Combined sources
Helixi103 – 11513Combined sources
Helixi129 – 1313Combined sources
Beta strandi134 – 1374Combined sources
Beta strandi142 – 1465Combined sources
Beta strandi149 – 1557Combined sources
Beta strandi158 – 1603Combined sources
Beta strandi164 – 1685Combined sources
Turni169 – 1724Combined sources
Beta strandi173 – 1775Combined sources
Turni178 – 1803Combined sources
Beta strandi182 – 1843Combined sources
Turni185 – 1873Combined sources
Beta strandi189 – 1913Combined sources
Helixi198 – 20912Combined sources
Beta strandi215 – 2228Combined sources
Beta strandi224 – 2263Combined sources
Helixi227 – 2315Combined sources
Helixi233 – 25321Combined sources
Helixi258 – 26912Combined sources
Helixi270 – 2734Combined sources
Turni274 – 2763Combined sources
Helixi279 – 29618Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2Q0IX-ray1.57A1-301[»]
2Q0JX-ray2.10A/B1-301[»]
2VW8X-ray1.45A1-301[»]
3DH8X-ray1.80A1-301[»]
ProteinModelPortaliP20581.
SMRiP20581. Positions 1-297.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP20581.

Family & Domainsi

Sequence similaritiesi

Belongs to the metallo-beta-lactamase superfamily.Curated

Phylogenomic databases

eggNOGiENOG4105R2E. Bacteria.
ENOG4111ZI3. LUCA.
HOGENOMiHOG000247670.
InParanoidiP20581.
OMAiMQIRTIA.
OrthoDBiEOG69GZQ4.

Family and domain databases

Gene3Di3.60.15.10. 1 hit.
InterProiIPR001279. Metallo-B-lactamas.
[Graphical view]
PfamiPF00753. Lactamase_B. 1 hit.
[Graphical view]
SMARTiSM00849. Lactamase_B. 1 hit.
[Graphical view]
SUPFAMiSSF56281. SSF56281. 1 hit.

Sequencei

Sequence statusi: Complete.

P20581-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLRLSAPGQL DDDLCLLGDV QVPVFLLRLG EASWALVEGG ISRDAELVWA
60 70 80 90 100
DLCRWVADPS QVHYWLITHK HYDHCGLLPY LCPRLPNVQV LASERTCQAW
110 120 130 140 150
KSESAVRVVE RLNRQLLRAE QRLPEACAWD ALPVRAVADG EWLELGPRHR
160 170 180 190 200
LQVIEAHGHS DDHVVFYDVR RRRLFCGDAL GEFDEAEGVW RPLVFDDMEA
210 220 230 240 250
YLESLERLQR LPTLLQLIPG HGGLLRGRLA ADGAESAYTE CLRLCRRLLW
260 270 280 290 300
RQSMGESLDE LSEELHRAWG GQSVDFLPGE LHLGSMRRML EILSRQALPL

D
Length:301
Mass (Da):34,306
Last modified:February 1, 1991 - v1
Checksum:iCB78E9103D8F221C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M33810 Genomic DNA. Translation: AAA88447.1.
AE004091 Genomic DNA. Translation: AAG04389.1.
PIRiC35116.
RefSeqiNP_249691.1. NC_002516.2.
WP_003086247.1. NZ_ASJY01000132.1.

Genome annotation databases

EnsemblBacteriaiAAG04389; AAG04389; PA1000.
GeneIDi880721.
KEGGipae:PA1000.
PATRICi19836290. VBIPseAer58763_1032.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M33810 Genomic DNA. Translation: AAA88447.1.
AE004091 Genomic DNA. Translation: AAG04389.1.
PIRiC35116.
RefSeqiNP_249691.1. NC_002516.2.
WP_003086247.1. NZ_ASJY01000132.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2Q0IX-ray1.57A1-301[»]
2Q0JX-ray2.10A/B1-301[»]
2VW8X-ray1.45A1-301[»]
3DH8X-ray1.80A1-301[»]
ProteinModelPortaliP20581.
SMRiP20581. Positions 1-297.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi208964.PA1000.

Proteomic databases

PaxDbiP20581.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAG04389; AAG04389; PA1000.
GeneIDi880721.
KEGGipae:PA1000.
PATRICi19836290. VBIPseAer58763_1032.

Organism-specific databases

PseudoCAPiPA1000.

Phylogenomic databases

eggNOGiENOG4105R2E. Bacteria.
ENOG4111ZI3. LUCA.
HOGENOMiHOG000247670.
InParanoidiP20581.
OMAiMQIRTIA.
OrthoDBiEOG69GZQ4.

Miscellaneous databases

EvolutionaryTraceiP20581.

Family and domain databases

Gene3Di3.60.15.10. 1 hit.
InterProiIPR001279. Metallo-B-lactamas.
[Graphical view]
PfamiPF00753. Lactamase_B. 1 hit.
[Graphical view]
SMARTiSM00849. Lactamase_B. 1 hit.
[Graphical view]
SUPFAMiSSF56281. SSF56281. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Identification and characterization of genes for a second anthranilate synthase in Pseudomonas aeruginosa: interchangeability of the two anthranilate synthases and evolutionary implications."
    Essar D.W., Eberly L., Hadero A., Crawford I.P.
    J. Bacteriol. 172:884-900(1990) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228.

Entry informationi

Entry nameiY1000_PSEAE
AccessioniPrimary (citable) accession number: P20581
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1991
Last sequence update: February 1, 1991
Last modified: December 9, 2015
This is version 85 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.