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Protein

30S ribosomal protein S19

Gene

rps19

Organism
Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.By similarity

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciHMAR272569:GJDH-1463-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S19
Alternative name(s):
HS18
HmaS19
Gene namesi
Name:rps19
Ordered Locus Names:rrnAC1607
OrganismiHaloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui)
Taxonomic identifieri272569 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaHalobacteriaHalobacterialesHalobacteriaceaeHaloarcula
Proteomesi
  • UP000001169 Componenti: Chromosome I

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methionineiRemoved1 Publication
Chaini2 – 14013930S ribosomal protein S19PRO_0000129999Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei2 – 21N-acetylserine1 Publication

Keywords - PTMi

Acetylation

Interactioni

Protein-protein interaction databases

STRINGi272569.rrnAC1607.

Structurei

3D structure databases

ProteinModelPortaliP20284.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S19P family.Curated

Phylogenomic databases

eggNOGiarCOG04099. Archaea.
COG0185. LUCA.
HOGENOMiHOG000111561.
KOiK02965.
OMAiQHGSPGM.

Family and domain databases

Gene3Di3.30.860.10. 1 hit.
HAMAPiMF_00531. Ribosomal_S19.
InterProiIPR002222. Ribosomal_S19.
IPR020934. Ribosomal_S19_CS.
IPR023575. Ribosomal_S19_SF.
IPR005713. Ribosomal_S19A/S15e.
[Graphical view]
PANTHERiPTHR11880. PTHR11880. 1 hit.
PfamiPF00203. Ribosomal_S19. 1 hit.
[Graphical view]
PIRSFiPIRSF002144. Ribosomal_S19. 1 hit.
PRINTSiPR00975. RIBOSOMALS19.
SUPFAMiSSF54570. SSF54570. 1 hit.
TIGRFAMsiTIGR01025. uS19_arch. 1 hit.
PROSITEiPS00323. RIBOSOMAL_S19. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P20284-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSEYQIGHE GEFSFRGHTL DELQEMELEE VAELLPARQR RSIVRGLTEE
60 70 80 90 100
KHKLLEKARE AGEEETANDP IRTHLRDMPV VPEMVGLTFA VHDGQNFERV
110 120 130 140
KVEPEMLGHY LGEFQLTRSS VEHGQAGIGA TRSSKFVPLK
Length:140
Mass (Da):15,897
Last modified:January 23, 2007 - v4
Checksum:iCBA4F044AAE48A26
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti11 – 155GEFSF → QEPSP AA sequence (PubMed:2655851).Curated
Sequence conflicti64 – 641E → D AA sequence (PubMed:2655851).Curated
Sequence conflicti83 – 831E → D AA sequence (PubMed:2655851).Curated
Sequence conflicti89 – 891F → L AA sequence (PubMed:2655851).Curated
Sequence conflicti89 – 891F → L in AAA86863 (PubMed:2406244).Curated
Sequence conflicti136 – 1361F → P AA sequence (PubMed:2655851).Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
J05222 Genomic DNA. Translation: AAA86863.1.
AY596297 Genomic DNA. Translation: AAV46524.1.
PIRiG35063. R3HS19.
RefSeqiWP_004516967.1. NC_006396.1.

Genome annotation databases

EnsemblBacteriaiAAV46524; AAV46524; rrnAC1607.
GeneIDi3128438.
KEGGihma:rrnAC1607.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
J05222 Genomic DNA. Translation: AAA86863.1.
AY596297 Genomic DNA. Translation: AAV46524.1.
PIRiG35063. R3HS19.
RefSeqiWP_004516967.1. NC_006396.1.

3D structure databases

ProteinModelPortaliP20284.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272569.rrnAC1607.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAV46524; AAV46524; rrnAC1607.
GeneIDi3128438.
KEGGihma:rrnAC1607.

Phylogenomic databases

eggNOGiarCOG04099. Archaea.
COG0185. LUCA.
HOGENOMiHOG000111561.
KOiK02965.
OMAiQHGSPGM.

Enzyme and pathway databases

BioCyciHMAR272569:GJDH-1463-MONOMER.

Family and domain databases

Gene3Di3.30.860.10. 1 hit.
HAMAPiMF_00531. Ribosomal_S19.
InterProiIPR002222. Ribosomal_S19.
IPR020934. Ribosomal_S19_CS.
IPR023575. Ribosomal_S19_SF.
IPR005713. Ribosomal_S19A/S15e.
[Graphical view]
PANTHERiPTHR11880. PTHR11880. 1 hit.
PfamiPF00203. Ribosomal_S19. 1 hit.
[Graphical view]
PIRSFiPIRSF002144. Ribosomal_S19. 1 hit.
PRINTSiPR00975. RIBOSOMALS19.
SUPFAMiSSF54570. SSF54570. 1 hit.
TIGRFAMsiTIGR01025. uS19_arch. 1 hit.
PROSITEiPS00323. RIBOSOMAL_S19. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Organization and nucleotide sequence of a gene cluster coding for eight ribosomal proteins in the archaebacterium Halobacterium marismortui."
    Arndt E., Kroemer W., Hatakeyama T.
    J. Biol. Chem. 265:3034-3039(1990) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809.
  3. "Ribosomal proteins in halobacteria."
    Kimura M., Arndt E., Hatakeyama T., Hatakeyama T., Kimura J.
    Can. J. Microbiol. 35:195-199(1989) [PubMed] [Europe PMC] [Abstract]
    Cited for: PROTEIN SEQUENCE OF 2-140, ACETYLATION AT SER-2.

Entry informationi

Entry nameiRS19_HALMA
AccessioniPrimary (citable) accession number: P20284
Secondary accession number(s): Q5V1S8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1991
Last sequence update: January 23, 2007
Last modified: December 9, 2015
This is version 101 of the entry and version 4 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.