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Protein

60S ribosomal protein L21

Gene

Rpl21

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Component of the large ribosomal subunit.By similarity

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L21
Gene namesi
Name:Rpl21
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Unplaced

Organism-specific databases

RGDi68390 Rpl21

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cytoplasm, Endoplasmic reticulum

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemovedBy similarity
ChainiPRO_00001496722 – 16060S ribosomal protein L21Add BLAST159

Proteomic databases

PaxDbiP20280
PRIDEiP20280

PTM databases

iPTMnetiP20280
PhosphoSitePlusiP20280
SwissPalmiP20280

Interactioni

Subunit structurei

Component of the large ribosomal subunit.By similarity

Protein-protein interaction databases

BioGridi249469, 1 interactor
STRINGi10116.ENSRNOP00000051312

Structurei

3D structure databases

ProteinModelPortaliP20280
SMRiP20280
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG1732 Eukaryota
COG2139 LUCA
HOGENOMiHOG000194513
HOVERGENiHBG001518
InParanoidiP20280
KOiK02889
PhylomeDBiP20280

Family and domain databases

Gene3Di2.30.30.70, 1 hit
InterProiView protein in InterPro
IPR036948 Ribosomal_L21_sf
IPR001147 Ribosomal_L21e
IPR018259 Ribosomal_L21e_CS
IPR008991 Translation_prot_SH3-like_sf
PANTHERiPTHR20981 PTHR20981, 1 hit
PfamiView protein in Pfam
PF01157 Ribosomal_L21e, 1 hit
SUPFAMiSSF50104 SSF50104, 1 hit
PROSITEiView protein in PROSITE
PS01171 RIBOSOMAL_L21E, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P20280-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTNTKGKRRG TRYMFSRPFR KHGVVPLATY MRIYKKGDIV DIKGMGTVQK
60 70 80 90 100
GMPHKCYHGK TGRVYNVTQH AVGIIVNKQV KGKILAKRIN VRIEHIKHSK
110 120 130 140 150
SRDSFLKRVK ENDQKKKEAK EKGTWVQLNG QPAPPREAHF VRTNGKEPEL
160
LEPIPYEFMA
Length:160
Mass (Da):18,466
Last modified:January 23, 2007 - v3
Checksum:i68F265B18EAFB876
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M27905 mRNA Translation: AAA41504.1
X15216 mRNA Translation: CAA33286.1
PIRiA33295 R5RT21
RefSeqiNP_445782.1, NM_053330.1
UniGeneiRn.129926
Rn.156707
Rn.201357
Rn.203267
Rn.83200

Genome annotation databases

GeneIDi79449
KEGGirno:79449

Similar proteinsi

Entry informationi

Entry nameiRL21_RAT
AccessioniPrimary (citable) accession number: P20280
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 1, 1991
Last sequence update: January 23, 2007
Last modified: May 23, 2018
This is version 124 of the entry and version 3 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

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