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Protein

Protein D-63

Gene

d63

Organism
Sulfolobus spindle-shape virus 1 (SSV1)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

This protein may be involved in virus assembly.

Names & Taxonomyi

Protein namesi
Recommended name:
Protein D-63
Gene namesi
ORF Names:d63
OrganismiSulfolobus spindle-shape virus 1 (SSV1)
Taxonomic identifieri244589 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stageFuselloviridaeAlphafusellovirus
Virus hostiSulfolobus solfataricus [TaxID: 2287]
Proteomesi
  • UP000000854 Componenti: Genome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 6363Protein D-63PRO_0000223031Add
BLAST

Interactioni

Subunit structurei

Homodimer.1 Publication

Structurei

Secondary structure

1
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi3 – 3432Combined sources
Helixi40 – 6324Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1SKVX-ray2.60A/B/C/D1-63[»]
ProteinModelPortaliP20215.
SMRiP20215. Positions 2-63.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP20215.

Family & Domainsi

Family and domain databases

Gene3Di1.10.287.660. 1 hit.
InterProiIPR029011. D-63.
IPR029012. Helix_hairpin_bin.
[Graphical view]
SUPFAMiSSF109801. SSF109801. 1 hit.

Sequencei

Sequence statusi: Complete.

P20215-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSKEVLEKEL FEMLDEDVRE LLSLIHEIKI DRITGNMDKQ KLGKAYFQVQ
60
KIEAELYQLI KVS
Length:63
Mass (Da):7,469
Last modified:February 1, 1991 - v1
Checksum:iF6840AE52DA4CB5E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X07234 Genomic DNA. Translation: CAA30219.1.
PIRiS03220.
RefSeqiNP_039786.1. NC_001338.1.

Genome annotation databases

GeneIDi2559643.
KEGGivg:2559643.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X07234 Genomic DNA. Translation: CAA30219.1.
PIRiS03220.
RefSeqiNP_039786.1. NC_001338.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1SKVX-ray2.60A/B/C/D1-63[»]
ProteinModelPortaliP20215.
SMRiP20215. Positions 2-63.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi2559643.
KEGGivg:2559643.

Miscellaneous databases

EvolutionaryTraceiP20215.

Family and domain databases

Gene3Di1.10.287.660. 1 hit.
InterProiIPR029011. D-63.
IPR029012. Helix_hairpin_bin.
[Graphical view]
SUPFAMiSSF109801. SSF109801. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiD63_SSV1
AccessioniPrimary (citable) accession number: P20215
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1991
Last sequence update: February 1, 1991
Last modified: December 9, 2015
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.