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Protein

Uncharacterized protein B-129

Gene

b129

Organism
Sulfolobus spindle-shape virus 1 (SSV1)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Essential for virus function.1 Publication

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri75 – 9925C2H2-type 1PROSITE-ProRule annotationAdd
BLAST
Zinc fingeri101 – 12424C2H2-type 2PROSITE-ProRule annotationAdd
BLAST

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

Metal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein B-129
Gene namesi
ORF Names:b129
OrganismiSulfolobus spindle-shape virus 1 (SSV1)
Taxonomic identifieri244589 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stageFuselloviridaeAlphafusellovirus
Virus hostiSulfolobus solfataricus [TaxID: 2287]
Proteomesi
  • UP000000854 Componenti: Genome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 129129Uncharacterized protein B-129PRO_0000047834Add
BLAST

Structurei

Secondary structure

1
129
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi12 – 154Combined sources
Beta strandi20 – 234Combined sources
Helixi26 – 327Combined sources
Helixi37 – 5216Combined sources
Helixi54 – 563Combined sources
Turni57 – 593Combined sources
Helixi60 – 7213Combined sources
Beta strandi74 – 763Combined sources
Turni78 – 803Combined sources
Beta strandi83 – 864Combined sources
Helixi87 – 9610Combined sources
Turni104 – 1063Combined sources
Helixi113 – 12210Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2WBTX-ray2.70A/B1-129[»]
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP20201.

Family & Domainsi

Sequence similaritiesi

Contains 2 C2H2-type zinc fingers.PROSITE-ProRule annotation

Zinc finger

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri75 – 9925C2H2-type 1PROSITE-ProRule annotationAdd
BLAST
Zinc fingeri101 – 12424C2H2-type 2PROSITE-ProRule annotationAdd
BLAST

Keywords - Domaini

Repeat, Zinc-finger

Family and domain databases

InterProiIPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
[Graphical view]
PfamiPF12756. zf-C2H2_2. 1 hit.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 2 hits.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 2 hits.
PS50157. ZINC_FINGER_C2H2_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P20201-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTESDVDSGS KKYLSNHKGI FIHVTLEELK RYHQLTPEQK RLIRAIVKTL
60 70 80 90 100
IHNPQLLDES SYLYRLLASK AISQFVCPLC LMPFSSSVSL KQHIRYTEHT
110 120
KVCPVCKKEF TSTDSALDHV CKKHNICVS
Length:129
Mass (Da):14,804
Last modified:February 1, 1991 - v1
Checksum:i1E66442AB9CB1668
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X07234 Genomic DNA. Translation: CAA30197.1.
PIRiS03229.
RefSeqiNP_039795.1. NC_001338.1.

Genome annotation databases

GeneIDi2559654.
KEGGivg:2559654.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X07234 Genomic DNA. Translation: CAA30197.1.
PIRiS03229.
RefSeqiNP_039795.1. NC_001338.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2WBTX-ray2.70A/B1-129[»]
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi2559654.
KEGGivg:2559654.

Miscellaneous databases

EvolutionaryTraceiP20201.

Family and domain databases

InterProiIPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
[Graphical view]
PfamiPF12756. zf-C2H2_2. 1 hit.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 2 hits.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 2 hits.
PS50157. ZINC_FINGER_C2H2_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete nucleotide sequence of the virus SSV1 of the archaebacterium Sulfolobus shibatae."
    Palm P., Schleper C., Grampp B., Yeats S., McWilliam P., Reiter W.-D., Zillig W.
    Virology 185:242-250(1991) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. "Genetic requirements for the function of the archaeal virus SSV1 in Sulfolobus solfataricus: construction and testing of viral shuttle vectors."
    Stedman K.M., Schleper C., Rumpf E., Zillig W.
    Genetics 152:1397-1405(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: FUNCTION.

Entry informationi

Entry nameiB129_SSV1
AccessioniPrimary (citable) accession number: P20201
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1991
Last sequence update: February 1, 1991
Last modified: December 9, 2015
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.