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Protein

Uncharacterized protein B-129

Gene

b129

Organism
Sulfolobus spindle-shape virus 1 (SSV1)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Essential for virus function.1 Publication

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri75 – 99C2H2-type 1PROSITE-ProRule annotationAdd BLAST25
Zinc fingeri101 – 124C2H2-type 2PROSITE-ProRule annotationAdd BLAST24

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

Metal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein B-129
Gene namesi
ORF Names:b129
OrganismiSulfolobus spindle-shape virus 1 (SSV1)
Taxonomic identifieri244589 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stageFuselloviridaeAlphafusellovirus
Virus hostiSulfolobus solfataricus [TaxID: 2287]
Proteomesi
  • UP000000854 Componenti: Genome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000478341 – 129Uncharacterized protein B-129Add BLAST129

Structurei

Secondary structure

1129
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi12 – 15Combined sources4
Beta strandi20 – 23Combined sources4
Helixi26 – 32Combined sources7
Helixi37 – 52Combined sources16
Helixi54 – 56Combined sources3
Turni57 – 59Combined sources3
Helixi60 – 72Combined sources13
Beta strandi74 – 76Combined sources3
Turni78 – 80Combined sources3
Beta strandi83 – 86Combined sources4
Helixi87 – 96Combined sources10
Turni104 – 106Combined sources3
Helixi113 – 122Combined sources10

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2WBTX-ray2.70A/B1-129[»]
SMRiP20201.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP20201.

Family & Domainsi

Sequence similaritiesi

Contains 2 C2H2-type zinc fingers.PROSITE-ProRule annotation

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri75 – 99C2H2-type 1PROSITE-ProRule annotationAdd BLAST25
Zinc fingeri101 – 124C2H2-type 2PROSITE-ProRule annotationAdd BLAST24

Keywords - Domaini

Repeat, Zinc-finger

Family and domain databases

InterProiIPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
[Graphical view]
PfamiPF12756. zf-C2H2_2. 1 hit.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 2 hits.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 2 hits.
PS50157. ZINC_FINGER_C2H2_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P20201-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTESDVDSGS KKYLSNHKGI FIHVTLEELK RYHQLTPEQK RLIRAIVKTL
60 70 80 90 100
IHNPQLLDES SYLYRLLASK AISQFVCPLC LMPFSSSVSL KQHIRYTEHT
110 120
KVCPVCKKEF TSTDSALDHV CKKHNICVS
Length:129
Mass (Da):14,804
Last modified:February 1, 1991 - v1
Checksum:i1E66442AB9CB1668
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X07234 Genomic DNA. Translation: CAA30197.1.
PIRiS03229.
RefSeqiNP_039795.1. NC_001338.1.

Genome annotation databases

GeneIDi2559654.
KEGGivg:2559654.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X07234 Genomic DNA. Translation: CAA30197.1.
PIRiS03229.
RefSeqiNP_039795.1. NC_001338.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2WBTX-ray2.70A/B1-129[»]
SMRiP20201.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi2559654.
KEGGivg:2559654.

Miscellaneous databases

EvolutionaryTraceiP20201.

Family and domain databases

InterProiIPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
[Graphical view]
PfamiPF12756. zf-C2H2_2. 1 hit.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 2 hits.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 2 hits.
PS50157. ZINC_FINGER_C2H2_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiB129_SSV1
AccessioniPrimary (citable) accession number: P20201
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1991
Last sequence update: February 1, 1991
Last modified: November 2, 2016
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.