Reviewed, UniProtKB/Swiss-Prot P20124 (COAT_OYMV)

Names and origin

Protein names	Recommended name:     Coat protein Alternative name(s):     Virion protein
Organism	Ononis yellow mosaic virus
Taxonomic identifier	12153 [NCBI]
Taxonomic lineage	Viruses › ssRNA positive-strand viruses, no DNA stage › Tymoviridae › Tymovirus
Virus host	Ononis [TaxID: 58889]

Protein attributes

Sequence length	192 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Subunit structure	The virus coat is composed of 180 copies of the coat protein arranged in a icosahedral shell.
Subcellular location	Virion Potential.
Sequence similarities	Belongs to the tymoviruses coat protein family.

Ontologies

Keywords
Cellular component	Capsid protein Virion
Gene Ontology (GO)
Cellular component	viral capsid Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	structural molecule activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 192	192	Coat protein		PRO_0000222930

Sequences

	Sequence		Length	Mass (Da)
	P20124-1 [UniParc]. Last modified February 1, 1991. Version 1. Checksum: 2465E4050E4A018E	FASTA	192	20,466
	10 20 30 40 50 60 MEDSQPIKVR QPSISAPGTH LSPNPGQQSP SMVVPFQVSV SDLGVSEVSA QITLSSDPTL 70 80 90 100 110 120 AQLTSIYRMA SIVECEAVLF PNSTSSKNPV HCDLIWVPSN SSASPKTILQ TYGGNRFTVG 130 140 150 160 170 180 GPITSNQIIS FPLRLDSVNP IIKDSVLYLD SPRLLAFSPA PPETQSIPSA SLLIRGKLRL 190 SSILVQPLLT SS

References

[1]	"Nucleotide sequence of the ononis yellow mosaic tymovirus genome." Ding S.W., Keese P., Gibbs A. Virology 172:555-563(1989) [PubMed: 2800337] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Cross-references

Sequence databases
EMBLGenBankDDBJ	J04375 Genomic RNA. Translation: AAA46797.1.
PIR	VCWPYM. JQ0108.
RefSeq	NP_041258.1.
3D structure databases
HSSP	HSSP built from PDB template 1QJZ based on UniProtKB P36351.
ModBase	Search...
Genome annotation databases
GeneID	1493967.
Family and domain databases
InterPro	IPR000574. Tymo_coat. [Graphical view]
Pfam	PF00983. Tymo_coat. 1 hit. [Graphical view]
ProDom	PD003886. Tymo_coat. 1 hit. [Graphical view] [Entries sharing at least one domain]
ProtoNet	Search...

Entry information

Entry name

COAT_OYMV

Accession

Primary (citable) accession number: P20124

Entry history

Integrated into UniProtKB/Swiss-Prot:	February 1, 1991
Last sequence update:	February 1, 1991
Last modified:	June 16, 2009
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

Virus (Virus annotation project)