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P19955

- RT31_YEAST

UniProt

P19955 - RT31_YEAST

Protein

37S ribosomal protein YMR-31, mitochondrial

Gene

YMR31

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed - Annotation score: 4 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 117 (01 Oct 2014)
      Sequence version 1 (01 Feb 1991)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. protein binding Source: IntAct
    2. structural constituent of ribosome Source: SGD

    GO - Biological processi

    1. cytoplasmic translation Source: SGD

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Enzyme and pathway databases

    BioCyciYEAST:G3O-30495-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    37S ribosomal protein YMR-31, mitochondrial
    Gene namesi
    Name:YMR31
    Ordered Locus Names:YFR049W
    OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
    Taxonomic identifieri559292 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
    ProteomesiUP000002311: Chromosome VI

    Organism-specific databases

    CYGDiYFR049w.
    SGDiS000001945. YMR31.

    Subcellular locationi

    Mitochondrion 2 Publications

    GO - Cellular componenti

    1. mitochondrial ribosome Source: SGD
    2. mitochondrion Source: SGD

    Keywords - Cellular componenti

    Mitochondrion

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transit peptidei1 – 88Mitochondrion1 Publication
    Chaini9 – 12311537S ribosomal protein YMR-31, mitochondrialPRO_0000030587Add
    BLAST

    Proteomic databases

    MaxQBiP19955.
    PaxDbiP19955.
    PeptideAtlasiP19955.

    Expressioni

    Gene expression databases

    GenevestigatoriP19955.

    Interactioni

    Subunit structurei

    Component of the mitochondrial small ribosomal subunit. Mature mitochondrial ribosomes consist of a small (37S) and a large (54S) subunit. The 37S subunit contains at least 33 different proteins and 1 molecule of RNA (15S). The 54S subunit contains at least 45 different proteins and 1 molecule of RNA (21S).1 Publication

    Binary interactionsi

    WithEntry#Exp.IntActNotes
    KGD2P192623EBI-16295,EBI-12464

    Protein-protein interaction databases

    BioGridi31207. 24 interactions.
    DIPiDIP-5447N.
    IntActiP19955. 8 interactions.
    MINTiMINT-484612.
    STRINGi4932.YFR049W.

    Structurei

    3D structure databases

    ProteinModelPortaliP19955.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Keywords - Domaini

    Transit peptide

    Phylogenomic databases

    eggNOGiNOG46721.
    HOGENOMiHOG000182011.
    KOiK17417.
    OMAiNEHELES.
    OrthoDBiEOG7JHMK1.

    Family and domain databases

    InterProiIPR020373. Ribosomal_S36_mt.
    [Graphical view]
    PfamiPF10937. DUF2638. 1 hit.
    [Graphical view]
    ProDomiPD078011. Ribosomal_YMR-31_mt. 1 hit.
    [Graphical view] [Entries sharing at least one domain]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    P19955-1 [UniParc]FASTAAdd to Basket

    « Hide

    MIATPIRLAK SAYEPMIKFV GTRHPLVKHA TEVVVHPCAT NGMLPGSKEC    50
    IPVSKFMENY KPFRVVPIKH SANAGLSSSK TSVFVNRPLQ KDELASIFEL 100
    PARFRYKPIN EHELESINSG GAW 123
    Length:123
    Mass (Da):13,689
    Last modified:February 1, 1991 - v1
    Checksum:i25E491375CE7A137
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X17540 Genomic DNA. Translation: CAA35577.1.
    D50617 Genomic DNA. Translation: BAA09288.1.
    AY558475 Genomic DNA. Translation: AAS56801.1.
    BK006940 Genomic DNA. Translation: DAA12492.1.
    PIRiJQ0368.
    RefSeqiNP_116707.3. NM_001180014.3.

    Genome annotation databases

    EnsemblFungiiYFR049W; YFR049W; YFR049W.
    GeneIDi850610.
    KEGGisce:YFR049W.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X17540 Genomic DNA. Translation: CAA35577.1 .
    D50617 Genomic DNA. Translation: BAA09288.1 .
    AY558475 Genomic DNA. Translation: AAS56801.1 .
    BK006940 Genomic DNA. Translation: DAA12492.1 .
    PIRi JQ0368.
    RefSeqi NP_116707.3. NM_001180014.3.

    3D structure databases

    ProteinModelPortali P19955.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 31207. 24 interactions.
    DIPi DIP-5447N.
    IntActi P19955. 8 interactions.
    MINTi MINT-484612.
    STRINGi 4932.YFR049W.

    Proteomic databases

    MaxQBi P19955.
    PaxDbi P19955.
    PeptideAtlasi P19955.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblFungii YFR049W ; YFR049W ; YFR049W .
    GeneIDi 850610.
    KEGGi sce:YFR049W.

    Organism-specific databases

    CYGDi YFR049w.
    SGDi S000001945. YMR31.

    Phylogenomic databases

    eggNOGi NOG46721.
    HOGENOMi HOG000182011.
    KOi K17417.
    OMAi NEHELES.
    OrthoDBi EOG7JHMK1.

    Enzyme and pathway databases

    BioCyci YEAST:G3O-30495-MONOMER.

    Miscellaneous databases

    NextBioi 966496.

    Gene expression databases

    Genevestigatori P19955.

    Family and domain databases

    InterProi IPR020373. Ribosomal_S36_mt.
    [Graphical view ]
    Pfami PF10937. DUF2638. 1 hit.
    [Graphical view ]
    ProDomi PD078011. Ribosomal_YMR-31_mt. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    ProtoNeti Search...

    Publicationsi

    1. "Cloning and analysis of the nuclear genes for two mitochondrial ribosomal proteins in yeast."
      Matsushita Y., Kitakawa M., Isono K.
      Mol. Gen. Genet. 219:119-124(1989) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], PROTEIN SEQUENCE OF 9-32, SUBUNIT.
      Strain: ATCC 64665 / S288c / DC5.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 204508 / S288c.
    3. Cited for: GENOME REANNOTATION.
      Strain: ATCC 204508 / S288c.
    4. "Analysis of a 36.2 kb DNA sequence including the right telomere of chromosome VI from Saccharomyces cerevisiae."
      Eki T., Naitou M., Hagiwara H., Ozawa M., Sasanuma S., Sasanuma M., Tsuchiya Y., Shibata T., Hanaoka F., Murakami Y.
      Yeast 12:149-167(1996) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: ATCC 204511 / S288c / AB972.
    5. Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: ATCC 204508 / S288c.
    6. Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
    7. Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
    8. Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
      Strain: ATCC 76625 / YPH499.

    Entry informationi

    Entry nameiRT31_YEAST
    AccessioniPrimary (citable) accession number: P19955
    Secondary accession number(s): D6VTT2
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 1, 1991
    Last sequence update: February 1, 1991
    Last modified: October 1, 2014
    This is version 117 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programFungal Protein Annotation Program

    Miscellaneousi

    Miscellaneous

    Present with 2050 molecules/cell in log phase SD medium.1 Publication

    Keywords - Technical termi

    Complete proteome, Direct protein sequencing, Reference proteome

    Documents

    1. Yeast
      Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
    2. Yeast chromosome VI
      Yeast (Saccharomyces cerevisiae) chromosome VI: entries and gene names

    External Data

    Dasty 3