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Protein

37S ribosomal protein YMR-31, mitochondrial

Gene

YMR31

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • structural constituent of ribosome Source: SGD

GO - Biological processi

  • 2-oxoglutarate metabolic process Source: SGD
  • mitochondrial translation Source: SGD
  • tricarboxylic acid cycle Source: SGD
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciYEAST:G3O-30495-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
37S ribosomal protein YMR-31, mitochondrial
Gene namesi
Name:YMR31
Ordered Locus Names:YFR049W
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
Proteomesi
  • UP000002311 Componenti: Chromosome VI

Organism-specific databases

EuPathDBiFungiDB:YFR049W.
SGDiS000001945. YMR31.

Subcellular locationi

GO - Cellular componenti

  • mitochondrial oxoglutarate dehydrogenase complex Source: SGD
  • mitochondrial ribosome Source: SGD
  • mitochondrial small ribosomal subunit Source: SGD
Complete GO annotation...

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transit peptidei1 – 88Mitochondrion1 Publication
Chaini9 – 12311537S ribosomal protein YMR-31, mitochondrialPRO_0000030587Add
BLAST

Proteomic databases

MaxQBiP19955.

Interactioni

Subunit structurei

Component of the mitochondrial small ribosomal subunit. Mature mitochondrial ribosomes consist of a small (37S) and a large (54S) subunit. The 37S subunit contains at least 33 different proteins and 1 molecule of RNA (15S). The 54S subunit contains at least 45 different proteins and 1 molecule of RNA (21S).1 Publication

Binary interactionsi

WithEntry#Exp.IntActNotes
KGD2P192623EBI-16295,EBI-12464

Protein-protein interaction databases

BioGridi31207. 25 interactions.
DIPiDIP-5447N.
IntActiP19955. 8 interactions.
MINTiMINT-484612.

Structurei

3D structure databases

ProteinModelPortaliP19955.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transit peptide

Phylogenomic databases

HOGENOMiHOG000182011.
InParanoidiP19955.
KOiK17417.
OMAiAYEPMIK.
OrthoDBiEOG092C5VBE.

Family and domain databases

InterProiIPR020373. Ribosomal_S36_mt.
[Graphical view]
PfamiPF10937. DUF2638. 1 hit.
[Graphical view]
ProDomiPD078011. Ribosomal_YMR-31_mt. 1 hit.
[Graphical view] [Entries sharing at least one domain]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P19955-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIATPIRLAK SAYEPMIKFV GTRHPLVKHA TEVVVHPCAT NGMLPGSKEC
60 70 80 90 100
IPVSKFMENY KPFRVVPIKH SANAGLSSSK TSVFVNRPLQ KDELASIFEL
110 120
PARFRYKPIN EHELESINSG GAW
Length:123
Mass (Da):13,689
Last modified:February 1, 1991 - v1
Checksum:i25E491375CE7A137
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X17540 Genomic DNA. Translation: CAA35577.1.
D50617 Genomic DNA. Translation: BAA09288.1.
AY558475 Genomic DNA. Translation: AAS56801.1.
BK006940 Genomic DNA. Translation: DAA12492.1.
PIRiJQ0368.
RefSeqiNP_116707.3. NM_001180014.3.

Genome annotation databases

EnsemblFungiiBAA09288; BAA09288; BAA09288.
YFR049W; YFR049W; YFR049W.
GeneIDi850610.
KEGGisce:YFR049W.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X17540 Genomic DNA. Translation: CAA35577.1.
D50617 Genomic DNA. Translation: BAA09288.1.
AY558475 Genomic DNA. Translation: AAS56801.1.
BK006940 Genomic DNA. Translation: DAA12492.1.
PIRiJQ0368.
RefSeqiNP_116707.3. NM_001180014.3.

3D structure databases

ProteinModelPortaliP19955.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi31207. 25 interactions.
DIPiDIP-5447N.
IntActiP19955. 8 interactions.
MINTiMINT-484612.

Proteomic databases

MaxQBiP19955.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiBAA09288; BAA09288; BAA09288.
YFR049W; YFR049W; YFR049W.
GeneIDi850610.
KEGGisce:YFR049W.

Organism-specific databases

EuPathDBiFungiDB:YFR049W.
SGDiS000001945. YMR31.

Phylogenomic databases

HOGENOMiHOG000182011.
InParanoidiP19955.
KOiK17417.
OMAiAYEPMIK.
OrthoDBiEOG092C5VBE.

Enzyme and pathway databases

BioCyciYEAST:G3O-30495-MONOMER.

Miscellaneous databases

PROiP19955.

Family and domain databases

InterProiIPR020373. Ribosomal_S36_mt.
[Graphical view]
PfamiPF10937. DUF2638. 1 hit.
[Graphical view]
ProDomiPD078011. Ribosomal_YMR-31_mt. 1 hit.
[Graphical view] [Entries sharing at least one domain]
ProtoNetiSearch...

Entry informationi

Entry nameiRT31_YEAST
AccessioniPrimary (citable) accession number: P19955
Secondary accession number(s): D6VTT2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1991
Last sequence update: February 1, 1991
Last modified: September 7, 2016
This is version 132 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Miscellaneous

Present with 2050 molecules/cell in log phase SD medium.1 Publication

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  2. Yeast chromosome VI
    Yeast (Saccharomyces cerevisiae) chromosome VI: entries and gene names

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.