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Protein

50S ribosomal protein L15

Gene

rplO

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Binds to the 23S rRNA.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciBSUB:BSU01350-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L15UniRule annotation
Gene namesi
Name:rplOUniRule annotation
Ordered Locus Names:BSU01350
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 14614650S ribosomal protein L15PRO_0000104674Add
BLAST

Proteomic databases

PaxDbiP19946.

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100000695.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3J3Velectron microscopy13.30L1-146[»]
3J3Welectron microscopy10.70L1-146[»]
3J9Welectron microscopy3.90BO1-146[»]
ProteinModelPortaliP19946.
SMRiP19946. Positions 1-146.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L15P family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108UZ0. Bacteria.
COG0200. LUCA.
HOGENOMiHOG000231262.
InParanoidiP19946.
KOiK02876.
OMAiGQMPLYQ.
OrthoDBiEOG6CGCM5.
PhylomeDBiP19946.

Family and domain databases

HAMAPiMF_01341. Ribosomal_L15.
InterProiIPR030878. Ribosomal_L15.
IPR005749. Ribosomal_L15_bac-type.
IPR001196. Ribosomal_L15_CS.
IPR021131. Ribosomal_L18e/L15P.
[Graphical view]
PANTHERiPTHR12934. PTHR12934. 1 hit.
PfamiPF00828. Ribosomal_L27A. 1 hit.
[Graphical view]
SUPFAMiSSF52080. SSF52080. 1 hit.
TIGRFAMsiTIGR01071. rplO_bact. 1 hit.
PROSITEiPS00475. RIBOSOMAL_L15. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P19946-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKLHELKPSE GSRKTRNRVG RGIGSGNGKT AGKGHKGQNA RSGGGVRPGF
60 70 80 90 100
EGGQMPLFQR LPKRGFTNIN RKEYAVVNLD KLNGFAEGTE VTPELLLETG
110 120 130 140
VISKLNAGVK ILGNGKLEKK LTVKANKFSA SAKEAVEAAG GTAEVI
Length:146
Mass (Da):15,383
Last modified:February 1, 1991 - v1
Checksum:i5DB07A902B266C11
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D00619 Genomic DNA. Translation: BAA00494.1.
X51329 Genomic DNA. Translation: CAA35711.1.
L47971 Genomic DNA. Translation: AAB06818.1.
AL009126 Genomic DNA. Translation: CAB11911.1.
M31102 Genomic DNA. Translation: AAB59117.1.
PIRiS12682. R5BSL5.
RefSeqiNP_388016.1. NC_000964.3.
WP_003225819.1. NZ_JNCM01000029.1.

Genome annotation databases

EnsemblBacteriaiCAB11911; CAB11911; BSU01350.
GeneIDi11237899.
935940.
KEGGibsu:BSU01350.
PATRICi18971779. VBIBacSub10457_0138.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D00619 Genomic DNA. Translation: BAA00494.1.
X51329 Genomic DNA. Translation: CAA35711.1.
L47971 Genomic DNA. Translation: AAB06818.1.
AL009126 Genomic DNA. Translation: CAB11911.1.
M31102 Genomic DNA. Translation: AAB59117.1.
PIRiS12682. R5BSL5.
RefSeqiNP_388016.1. NC_000964.3.
WP_003225819.1. NZ_JNCM01000029.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3J3Velectron microscopy13.30L1-146[»]
3J3Welectron microscopy10.70L1-146[»]
3J9Welectron microscopy3.90BO1-146[»]
ProteinModelPortaliP19946.
SMRiP19946. Positions 1-146.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100000695.

Proteomic databases

PaxDbiP19946.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB11911; CAB11911; BSU01350.
GeneIDi11237899.
935940.
KEGGibsu:BSU01350.
PATRICi18971779. VBIBacSub10457_0138.

Phylogenomic databases

eggNOGiENOG4108UZ0. Bacteria.
COG0200. LUCA.
HOGENOMiHOG000231262.
InParanoidiP19946.
KOiK02876.
OMAiGQMPLYQ.
OrthoDBiEOG6CGCM5.
PhylomeDBiP19946.

Enzyme and pathway databases

BioCyciBSUB:BSU01350-MONOMER.

Family and domain databases

HAMAPiMF_01341. Ribosomal_L15.
InterProiIPR030878. Ribosomal_L15.
IPR005749. Ribosomal_L15_bac-type.
IPR001196. Ribosomal_L15_CS.
IPR021131. Ribosomal_L18e/L15P.
[Graphical view]
PANTHERiPTHR12934. PTHR12934. 1 hit.
PfamiPF00828. Ribosomal_L27A. 1 hit.
[Graphical view]
SUPFAMiSSF52080. SSF52080. 1 hit.
TIGRFAMsiTIGR01071. rplO_bact. 1 hit.
PROSITEiPS00475. RIBOSOMAL_L15. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Cloning and characterization of a Bacillus subtilis gene homologous to E. coli secY."
    Nakamura K., Nakamura A., Takamatsu H., Yoshikawa H., Yamane K.
    J. Biochem. 107:603-607(1990) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. "Sequence of the Bacillus subtilis spectinomycin resistance gene region."
    Yoshikawa H., Doi R.H.
    Nucleic Acids Res. 18:1647-1647(1990) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  3. "Genetic and transcriptional organization of the Bacillus subtilis spc-alpha region."
    Suh J.-W., Boylan S.A., Oh S.H., Price C.W.
    Gene 169:17-23(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: 168 / Marburg / ATCC 6051 / DSM 10 / JCM 1465 / NBRC 13719 / NCIMB 3610 / VKM B-501.
  4. "The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
    Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V.
    , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
    Nature 390:249-256(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 168.
  5. "Isolation of a secY homologue from Bacillus subtilis: evidence for a common protein export pathway in eubacteria."
    Suh J.-W., Boylan S.A., Thomas S.M., Dolan K.M., Oliver D.B., Price C.W.
    Mol. Microbiol. 4:305-314(1990) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 94-146.
    Strain: 168.

Entry informationi

Entry nameiRL15_BACSU
AccessioniPrimary (citable) accession number: P19946
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1991
Last sequence update: February 1, 1991
Last modified: May 11, 2016
This is version 108 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. Ribosomal proteins
    Ribosomal proteins families and list of entries
  4. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.