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Protein

60S acidic ribosomal protein P0

Gene

Rplp0

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 5 out of 5-Experimental evidence at protein leveli

Functioni

Ribosomal protein P0 is the functional equivalent of E.coli protein L10.

GO - Molecular functioni

  • peptide binding Source: RGD
  • RNA binding Source: RGD
  • structural constituent of ribosome Source: RGD

GO - Biological processi

  • cellular response to cAMP Source: RGD
  • cellular response to interleukin-4 Source: RGD
  • cellular response to phorbol 13-acetate 12-myristate Source: RGD
  • cellular response to Thyroid stimulating hormone Source: RGD
  • lactation Source: RGD
  • response to selenium ion Source: RGD
  • ribosome biogenesis Source: InterPro

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-RNO-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-RNO-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-RNO-6791226. Major pathway of rRNA processing in the nucleolus and cytosol.
R-RNO-72689. Formation of a pool of free 40S subunits.
R-RNO-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-RNO-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-RNO-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
60S acidic ribosomal protein P0
Alternative name(s):
60S ribosomal protein L10E
Gene namesi
Name:Rplp0
Synonyms:Arbp
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 12

Organism-specific databases

RGDi621247. Rplp0.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cytoplasm, Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001547611 – 31760S acidic ribosomal protein P0Add BLAST317

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei24PhosphotyrosineBy similarity1
Modified residuei59PhosphothreonineBy similarity1
Cross-linki297Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO1)By similarity
Cross-linki297Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)By similarity
Modified residuei304PhosphoserineCombined sources1
Modified residuei307PhosphoserineCombined sources1

Keywords - PTMi

Isopeptide bond, Phosphoprotein, Ubl conjugation

Proteomic databases

PaxDbiP19945.
PRIDEiP19945.

PTM databases

iPTMnetiP19945.
PhosphoSitePlusiP19945.

Expressioni

Gene expression databases

BgeeiENSRNOG00000001148.
GenevisibleiP19945. RN.

Interactioni

Subunit structurei

P0 forms a pentameric complex by interaction with dimers of P1 and P2. Identified in a IGF2BP1-dependent mRNP granule complex containing untranslated mRNAs. Interacts with APEX1. Interacts with FMR1.By similarity

Protein-protein interaction databases

BioGridi249011. 3 interactors.
IntActiP19945. 3 interactors.
MINTiMINT-4565744.
STRINGi10116.ENSRNOP00000001518.

Structurei

3D structure databases

ProteinModelPortaliP19945.
SMRiP19945.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG0815. Eukaryota.
COG0244. LUCA.
GeneTreeiENSGT00390000017839.
HOGENOMiHOG000210987.
HOVERGENiHBG000711.
InParanoidiP19945.
KOiK02941.
OMAiFFQALQI.
OrthoDBiEOG091G0F47.
PhylomeDBiP19945.
TreeFamiTF300849.

Family and domain databases

InterProiView protein in InterPro
IPR030670. L10E_eukaryotes.
IPR001790. Ribosomal_L10P.
PfamiView protein in Pfam
PF00466. Ribosomal_L10. 1 hit.
PIRSFiPIRSF039087. L10E. 1 hit.

Sequencei

Sequence statusi: Complete.

P19945-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPREDRATWK SNYFLKIIQL LDDYPKCFIV GADNVGSKQM QQIRMSLRGK
60 70 80 90 100
AVVLMGKNTM MRKAIRGHLE NNPALEKLLP HIRGNVGFVF TKEDLTEIRD
110 120 130 140 150
MLLANKVPAA ARAGAIAPCE VTVPAQNTGL GPEKTSFFQA LGITTKISRG
160 170 180 190 200
TIEILSDVQL IKTGDKVGAS EATLLNMLNI SPFSFGLIIQ QVFDNGSIYS
210 220 230 240 250
PEVLDITEQA LHTRFLEGVR NVASVCLQIG YPTVASVPHS IINGYKRVLA
260 270 280 290 300
LSVETDYTFP LAEKVKAFLA DPSAFAAAAP VAAATTAAPA AAAAPAKVEA
310
KEESEESDED MGFGLFD
Length:317
Mass (Da):34,215
Last modified:February 1, 1995 - v2
Checksum:i7B842971C0E027EC
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti281V → L in CAA33199 (PubMed:1742361).Curated1
Sequence conflicti287A → L in CAA33199 (PubMed:1742361).Curated1
Sequence conflicti294Missing in CAA33199 (PubMed:1742361).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X15096 mRNA. Translation: CAA33199.1.
Z29530 mRNA. Translation: CAA82647.1.
BC062028 mRNA. Translation: AAH62028.1.
PIRiS08021. R5RT10.
RefSeqiNP_071797.1. NM_022402.2.
UniGeneiRn.1079.

Genome annotation databases

EnsembliENSRNOT00000001518; ENSRNOP00000001518; ENSRNOG00000001148.
GeneIDi64205.
KEGGirno:64205.

Similar proteinsi

Entry informationi

Entry nameiRLA0_RAT
AccessioniPrimary (citable) accession number: P19945
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 1, 1991
Last sequence update: February 1, 1995
Last modified: November 22, 2017
This is version 134 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families