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P19366 (ATPB_ARATH) Reviewed, UniProtKB/Swiss-Prot

Last modified June 11, 2014. Version 131. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
ATP synthase subunit beta, chloroplastic

EC=3.6.3.14
Alternative name(s):
ATP synthase F1 sector subunit beta
F-ATPase subunit beta
Gene names
Name:atpB
Ordered Locus Names:AtCg00480
Encoded onPlastid; Chloroplast
OrganismArabidopsis thaliana (Mouse-ear cress) [Reference proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Protein attributes

Sequence length498 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits By similarity. HAMAP-Rule MF_01347

Catalytic activity

ATP + H2O + H+(In) = ADP + phosphate + H+(Out). HAMAP-Rule MF_01347

Subunit structure

F-type ATPases have 2 components, CF1 - the catalytic core - and CF0 - the membrane proton channel. CF1 has five subunits: alpha3, beta3, gamma1, delta1, epsilon1. CF0 has four main subunits: a1, b1, b'1 and c(9-12) By similarity.

Subcellular location

Plastidchloroplast thylakoid membrane; Peripheral membrane protein By similarity HAMAP-Rule MF_01347.

Sequence similarities

Belongs to the ATPase alpha/beta chains family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 498498ATP synthase subunit beta, chloroplastic HAMAP-Rule MF_01347
PRO_0000144496

Regions

Nucleotide binding172 – 1798ATP By similarity

Amino acid modifications

Modified residue131Phosphoserine Ref.3

Sequences

Sequence LengthMass (Da)Tools
P19366 [UniParc].

Last modified May 30, 2000. Version 2.
Checksum: 174F4B075E7D57E3

FASTA49853,934
        10         20         30         40         50         60 
MRTNPTTSNP EVSIREKKNL GRIAQIIGPV LDVAFPPGKM PNIYNALVVK GRDTLGQEIN 

        70         80         90        100        110        120 
VTCEVQQLLG NNRVRAVAMS ATEGLKRGMD VVDMGNPLSV PVGGATLGRI FNVLGEPVDN 

       130        140        150        160        170        180 
LGPVDTRTTS PIHKSAPAFI ELDTKLSIFE TGIKVVDLLA PYRRGGKIGL FGGAGVGKTV 

       190        200        210        220        230        240 
LIMELINNIA KAHGGVSVFG GVGERTREGN DLYMEMKESG VINEQNLAES KVALVYGQMN 

       250        260        270        280        290        300 
EPPGARMRVG LTALTMAEYF RDVNEQDVLL FIDNIFRFVQ AGSEVSALLG RMPSAVGYQP 

       310        320        330        340        350        360 
TLSTEMGTLQ ERITSTKKGS ITSIQAVYVP ADDLTDPAPA TTFAHLDATT VLSRGLAAKG 

       370        380        390        400        410        420 
IYPAVDPLDS TSTMLQPRIV GEEHYETAQQ VKQTLQRYKE LQDIIAILGL DELSEEDRLT 

       430        440        450        460        470        480 
VARARKIERF LSQPFFVAEV FTGSPGKYVG LAETIRGFNL ILSGEFDSLP EQAFYLVGNI 

       490 
DEATAKATNL EMESKLKK 

« Hide

References

« Hide 'large scale' references
[1]"Complete structure of the chloroplast genome of Arabidopsis thaliana."
Sato S., Nakamura Y., Kaneko T., Asamizu E., Tabata S.
DNA Res. 6:283-290(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]"Nucleotide sequence of chloroplast CF1-ATPase epsilon-subunit and elongator tRNAMet genes from Arabidopsis thaliana."
Chen H.-C., Wintz H., Weil J.-H., Pillay D.T.N.
Nucleic Acids Res. 16:10372-10372(1988) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 486-498.
Strain: cv. Landsberg erecta.
[3]"Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks."
Reiland S., Messerli G., Baerenfaller K., Gerrits B., Endler A., Grossmann J., Gruissem W., Baginsky S.
Plant Physiol. 150:889-903(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-13, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
[4]"Identification of phosphoproteins in Arabidopsis thaliana leaves using polyethylene glycol fractionation, immobilized metal-ion affinity chromatography, two-dimensional gel electrophoresis and mass spectrometry."
Aryal U.K., Krochko J.E., Ross A.R.
J. Proteome Res. 11:425-437(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP000423 Genomic DNA. Translation: BAA84392.1.
X12889 Genomic DNA. Translation: CAA31380.1.
PIRS01904.
RefSeqNP_051066.1. NC_000932.1.

3D structure databases

ProteinModelPortalP19366.
SMRP19366. Positions 19-485.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

BioGrid29961. 2 interactions.
IntActP19366. 2 interactions.

2D gel databases

SWISS-2DPAGEP19366.

Proteomic databases

PaxDbP19366.
PRIDEP19366.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsATCG00480.1; ATCG00480.1; ATCG00480.
GeneID844757.
KEGGath:ArthCp029.

Organism-specific databases

TAIRATCG00480.

Phylogenomic databases

eggNOGCOG0055.
HOGENOMHOG000009605.
KOK02112.
OMAATRVKSI.

Enzyme and pathway databases

BioCycARA:ATCG00480-MONOMER.

Gene expression databases

GenevestigatorP19366.

Family and domain databases

Gene3D1.10.1140.10. 1 hit.
3.40.50.300. 1 hit.
HAMAPMF_01347. ATP_synth_beta_bact.
InterProIPR003593. AAA+_ATPase.
IPR020003. ATPase_a/bsu_AS.
IPR005722. ATPase_F1-cplx_bsu.
IPR000793. ATPase_F1/V1/A1-cplx_a/bsu_C.
IPR000194. ATPase_F1/V1/A1_a/bsu_nucl-bd.
IPR004100. ATPase_F1_a/bsu_N.
IPR024034. ATPase_F1_bsu/V1_C.
IPR027417. P-loop_NTPase.
[Graphical view]
PANTHERPTHR15184:SF8. PTHR15184:SF8. 1 hit.
PfamPF00006. ATP-synt_ab. 1 hit.
PF00306. ATP-synt_ab_C. 1 hit.
PF02874. ATP-synt_ab_N. 1 hit.
[Graphical view]
SMARTSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMSSF47917. SSF47917. 1 hit.
SSF50615. SSF50615. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR01039. atpD. 1 hit.
PROSITEPS00152. ATPASE_ALPHA_BETA. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameATPB_ARATH
AccessionPrimary (citable) accession number: P19366
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1990
Last sequence update: May 30, 2000
Last modified: June 11, 2014
This is version 131 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Arabidopsis thaliana

Arabidopsis thaliana: entries and gene names