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Protein

17.4 kDa class I heat shock protein

Gene

HSP17.4A

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

  • response to heat Source: TAIR
Complete GO annotation...

Keywords - Biological processi

Stress response

Names & Taxonomyi

Protein namesi
Recommended name:
17.4 kDa class I heat shock protein
Alternative name(s):
17.4 kDa heat shock protein 1
Short name:
AtHsp17.4A
Gene namesi
Name:HSP17.4A
Ordered Locus Names:At3g46230
ORF Names:F12M12_200
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 3

Organism-specific databases

TAIRiAT3G46230.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 15615617.4 kDa class I heat shock proteinPRO_0000125970Add
BLAST

Proteomic databases

PaxDbiP19036.
PRIDEiP19036.

Expressioni

Inductioni

Accumulates after heat shock.1 Publication

Gene expression databases

GenevisibleiP19036. AT.

Interactioni

Subunit structurei

May form oligomeric structures. Binds to AKR2A (PubMed:21730198).Curated1 Publication

Protein-protein interaction databases

BioGridi9088. 2 interactions.
IntActiP19036. 1 interaction.
STRINGi3702.AT3G46230.1.

Structurei

3D structure databases

ProteinModelPortaliP19036.
SMRiP19036. Positions 11-156.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the small heat shock protein (HSP20) family.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG0710. Eukaryota.
COG0071. LUCA.
HOGENOMiHOG000251751.
InParanoidiP19036.
KOiK13993.
OMAiNTETEHI.
PhylomeDBiP19036.

Family and domain databases

Gene3Di2.60.40.790. 1 hit.
InterProiIPR002068. A-crystallin/Hsp20_dom.
IPR031107. HSP20.
IPR008978. HSP20-like_chaperone.
[Graphical view]
PANTHERiPTHR11527. PTHR11527. 1 hit.
PfamiPF00011. HSP20. 1 hit.
[Graphical view]
SUPFAMiSSF49764. SSF49764. 1 hit.
PROSITEiPS01031. HSP20. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P19036-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLVPSFFGG RRTNVFDPFS LDVWDPFEGF LTPGLTNAPA KDVAAFTNAK
60 70 80 90 100
VDWRETPEAH VFKADVPGLK KEEVKVEVED GNILQISGER SSENEEKSDT
110 120 130 140 150
WHRVERSSGK FMRRFRLPEN AKVEEVKASM ENGVLSVTVP KVQESKPEVK

SVDISG
Length:156
Mass (Da):17,440
Last modified:June 6, 2002 - v2
Checksum:iF6FEA76EA8329501
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti6 – 61S → T in AAK95252 (PubMed:14593172).Curated
Sequence conflicti6 – 61S → T in AAN28742 (PubMed:14593172).Curated
Sequence conflicti152 – 1521V → I in CAA35182 (PubMed:2482931).Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X17293 Genomic DNA. Translation: CAA35182.1.
AL355775 Genomic DNA. Translation: CAB90950.1.
CP002686 Genomic DNA. Translation: AEE78138.1.
AF410266 mRNA. Translation: AAK95252.1.
AY143803 mRNA. Translation: AAN28742.1.
PIRiJQ0351.
T49264.
RefSeqiNP_190209.1. NM_114492.4.
UniGeneiAt.1484.
At.70182.

Genome annotation databases

EnsemblPlantsiAT3G46230.1; AT3G46230.1; AT3G46230.
GeneIDi823768.
GrameneiAT3G46230.1; AT3G46230.1; AT3G46230.
KEGGiath:AT3G46230.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X17293 Genomic DNA. Translation: CAA35182.1.
AL355775 Genomic DNA. Translation: CAB90950.1.
CP002686 Genomic DNA. Translation: AEE78138.1.
AF410266 mRNA. Translation: AAK95252.1.
AY143803 mRNA. Translation: AAN28742.1.
PIRiJQ0351.
T49264.
RefSeqiNP_190209.1. NM_114492.4.
UniGeneiAt.1484.
At.70182.

3D structure databases

ProteinModelPortaliP19036.
SMRiP19036. Positions 11-156.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi9088. 2 interactions.
IntActiP19036. 1 interaction.
STRINGi3702.AT3G46230.1.

Proteomic databases

PaxDbiP19036.
PRIDEiP19036.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT3G46230.1; AT3G46230.1; AT3G46230.
GeneIDi823768.
GrameneiAT3G46230.1; AT3G46230.1; AT3G46230.
KEGGiath:AT3G46230.

Organism-specific databases

TAIRiAT3G46230.

Phylogenomic databases

eggNOGiKOG0710. Eukaryota.
COG0071. LUCA.
HOGENOMiHOG000251751.
InParanoidiP19036.
KOiK13993.
OMAiNTETEHI.
PhylomeDBiP19036.

Miscellaneous databases

PROiP19036.

Gene expression databases

GenevisibleiP19036. AT.

Family and domain databases

Gene3Di2.60.40.790. 1 hit.
InterProiIPR002068. A-crystallin/Hsp20_dom.
IPR031107. HSP20.
IPR008978. HSP20-like_chaperone.
[Graphical view]
PANTHERiPTHR11527. PTHR11527. 1 hit.
PfamiPF00011. HSP20. 1 hit.
[Graphical view]
SUPFAMiSSF49764. SSF49764. 1 hit.
PROSITEiPS01031. HSP20. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Characterization of two genes encoding small heat-shock proteins in Arabidopsis thaliana."
    Takahashi T., Komeda Y.
    Mol. Gen. Genet. 219:365-372(1989) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: cv. Columbia.
  2. "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana."
    Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B., Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M., Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V., Choisne N., Artiguenave F.
    , Robert C., Brottier P., Wincker P., Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H., Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H., Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A., Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H., Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J., Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B., Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D., de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E., Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G., Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X., Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M., Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B., Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J., Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C., Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y., Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K., Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
    Nature 408:820-822(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  3. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  4. "Empirical analysis of transcriptional activity in the Arabidopsis genome."
    Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.
    , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
    Science 302:842-846(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Columbia.
  5. "Small heat shock protein Hsp17.8 functions as an AKR2A cofactor in the targeting of chloroplast outer membrane proteins in Arabidopsis."
    Kim D.H., Xu Z.-Y., Na Y.J., Yoo Y.-J., Lee J., Sohn E.-J., Hwang I.
    Plant Physiol. 157:132-146(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: INTERACTION WITH AKR2A, INDUCTION BY HEAT SHOCK.
    Strain: cv. Columbia.

Entry informationi

Entry nameiHSP17_ARATH
AccessioniPrimary (citable) accession number: P19036
Secondary accession number(s): Q540N8, Q94EJ5, Q9LX72
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1990
Last sequence update: June 6, 2002
Last modified: February 17, 2016
This is version 117 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.