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Protein

39S ribosomal protein L3, mitochondrial

Gene

Mrpl3

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
39S ribosomal protein L3, mitochondrial
Short name:
L3mt
Short name:
MRP-L3
Gene namesi
Name:Mrpl3
Synonyms:Mrl3, Rpml3
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Unplaced

Organism-specific databases

RGDi1306391. Mrpl3.

Subcellular locationi

  • Mitochondrion By similarity

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transit peptidei1 – 40MitochondrionBy similarityAdd BLAST40
ChainiPRO_000007725541 – 34739S ribosomal protein L3, mitochondrialAdd BLAST307

Proteomic databases

PaxDbiP18665.
PeptideAtlasiP18665.
PRIDEiP18665.

PTM databases

PhosphoSitePlusiP18665.

Interactioni

Subunit structurei

Component of the mitochondrial ribosome large subunit (39S) which comprises a 16S rRNA and about 50 distinct proteins.By similarity

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000017280.

Structurei

3D structure databases

ProteinModelPortaliP18665.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L3P family.Curated

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiKOG3141. Eukaryota.
COG0087. LUCA.
HOGENOMiHOG000100369.
HOVERGENiHBG002294.
InParanoidiP18665.
PhylomeDBiP18665.

Family and domain databases

InterProiIPR000597. Ribosomal_L3.
IPR019927. Ribosomal_L3_bac/org-type.
IPR019926. Ribosomal_L3_CS.
IPR009000. Transl_B-barrel.
[Graphical view]
PANTHERiPTHR11229. PTHR11229. 1 hit.
PfamiPF00297. Ribosomal_L3. 1 hit.
[Graphical view]
SUPFAMiSSF50447. SSF50447. 1 hit.
TIGRFAMsiTIGR03625. L3_bact. 1 hit.
PROSITEiPS00474. RIBOSOMAL_L3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P18665-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPGWRLLAQG GAQVLGGGAG GLGAAPGLGS RKNILFVVRN LHSKSSTWWD
60 70 80 90 100
EHLSEENVSF VKQLVSDENK AQLTSLLNPL KDEPWPLHPW EPGSSRVGLI
110 120 130 140 150
ALKLGMMPLW TKDGQKHAVT LLQVQDCHVL KYTPKEDHNG KTATLTVGGK
160 170 180 190 200
TGSRLYKANS ILEFYRDLGL PPKQTTKIFH VTDNAVIKQG TPLYAAHFRP
210 220 230 240 250
GQYVDVTAKT IGKGFQGVMK RWGFKGQPAS HGQTKTHRRP GAISTGDIAR
260 270 280 290 300
VWPGTKMPGK MGNQNRTVYG LKVWRVNTKH NIIYVNGSVG HRNCLVKIKD
310 320 330 340
STLPAYKDLG KSLPFPTYFP DGDEEELPED LYDESVRQPS DPSITFA
Length:347
Mass (Da):38,253
Last modified:November 1, 1990 - v1
Checksum:i2D59DB9251E8B146
GO

Sequence databases

PIRiS05472. R5RTL3.
UniGeneiRn.6950.

Genome annotation databases

UCSCiRGD:1306391. rat.

Cross-referencesi

Sequence databases

PIRiS05472. R5RTL3.
UniGeneiRn.6950.

3D structure databases

ProteinModelPortaliP18665.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000017280.

PTM databases

PhosphoSitePlusiP18665.

Proteomic databases

PaxDbiP18665.
PeptideAtlasiP18665.
PRIDEiP18665.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

UCSCiRGD:1306391. rat.

Organism-specific databases

RGDi1306391. Mrpl3.

Phylogenomic databases

eggNOGiKOG3141. Eukaryota.
COG0087. LUCA.
HOGENOMiHOG000100369.
HOVERGENiHBG002294.
InParanoidiP18665.
PhylomeDBiP18665.

Miscellaneous databases

PROiP18665.

Family and domain databases

InterProiIPR000597. Ribosomal_L3.
IPR019927. Ribosomal_L3_bac/org-type.
IPR019926. Ribosomal_L3_CS.
IPR009000. Transl_B-barrel.
[Graphical view]
PANTHERiPTHR11229. PTHR11229. 1 hit.
PfamiPF00297. Ribosomal_L3. 1 hit.
[Graphical view]
SUPFAMiSSF50447. SSF50447. 1 hit.
TIGRFAMsiTIGR03625. L3_bact. 1 hit.
PROSITEiPS00474. RIBOSOMAL_L3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRM03_RAT
AccessioniPrimary (citable) accession number: P18665
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1990
Last sequence update: November 1, 1990
Last modified: November 30, 2016
This is version 98 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.