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P18162

- MCP_IRV1

UniProt

P18162 - MCP_IRV1

Protein

Major capsid protein

Gene

MCP

Organism
Tipula iridescent virus (TIV) (Insect iridescent virus type 1)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 62 (01 Oct 2014)
      Sequence version 1 (01 Nov 1990)
      Previous versions | rss
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    Functioni

    Major capsid protein that self assembles to form an icosahedral capsid. Represents around 50% of the total virion protein mass By similarity.By similarity

    GO - Molecular functioni

    1. structural molecule activity Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Major capsid protein
    Short name:
    MCP
    Alternative name(s):
    P50
    Gene namesi
    Name:MCP
    OrganismiTipula iridescent virus (TIV) (Insect iridescent virus type 1)
    Taxonomic identifieri10490 [NCBI]
    Taxonomic lineageiVirusesdsDNA viruses, no RNA stageIridoviridaeIridovirus
    Virus hostiTipula [TaxID: 41043]

    Subcellular locationi

    Virion Curated

    GO - Cellular componenti

    1. viral capsid Source: UniProtKB-KW

    Keywords - Cellular componenti

    Capsid protein, Virion

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 464464Major capsid proteinPRO_0000222380Add
    BLAST

    Post-translational modificationi

    The N-terminus is blocked.

    Expressioni

    Keywords - Developmental stagei

    Late protein

    Interactioni

    Subunit structurei

    Homotrimer.By similarity

    Structurei

    3D structure databases

    ProteinModelPortaliP18162.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the NCLDV major capsid protein family.Curated

    Family and domain databases

    Gene3Di2.70.9.10. 1 hit.
    2.70.9.20. 1 hit.
    InterProiIPR016114. ASFV_p72.
    IPR016111. Hexon_subdom4.
    IPR007542. Virus_major_coat_C.
    IPR016112. VP_dsDNA_II.
    [Graphical view]
    PfamiPF04451. Capsid_NCLDV. 1 hit.
    [Graphical view]
    SUPFAMiSSF49749. SSF49749. 2 hits.

    Sequencei

    Sequence statusi: Complete.

    P18162-1 [UniParc]FASTAAdd to Basket

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    MSMSSSNITS GFIDIATFDE IEKYMYGGPT ATAYFVREIR KSTWFTQVPV    50
    PLSRNTGNAA FGQEWSVSIS RAGDYLLQTW LRVNIPPVTL SGLLGNTYSL 100
    RWTKNLMHNL IREATITFND LVAARFDNYH LDFWSAFTVP ASKRNGYDNM 150
    IGNVSSLINP VAPGGTLGSV GGINLNLPLP FFFSRDTGVA LPTAALPYNE 200
    MQINFNFRDW HELLILTNSA LVPPASPYVP IVVGTHISAA PVLGPVQVWA 250
    NYAIVSNEER RRMGCAIRDI LIEQVQTAPR QNYVPLTNAS PTFDIRFSHA 300
    IKALFFAVRN KTSAAEWSNY ATSSPVVTGA TVNYEPTGSF DPIANTTLIY 350
    ENTNRLGAMG SDYFSLINPF YHAPTIPSFI GYHLYSYSLH FYDLDPMGST 400
    NYGKLTNVSV VPQASPAAIA AAGGTGGQAG SDYPQNYEFV ILAVNNNIVR 450
    ISGGETPQNY IAVC 464
    Length:464
    Mass (Da):50,833
    Last modified:November 1, 1990 - v1
    Checksum:iBCDD65F326270910
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    M33542 Genomic DNA. Translation: AAA46245.1.
    PIRiA33558. VCXFTI.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    M33542 Genomic DNA. Translation: AAA46245.1 .
    PIRi A33558. VCXFTI.

    3D structure databases

    ProteinModelPortali P18162.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Family and domain databases

    Gene3Di 2.70.9.10. 1 hit.
    2.70.9.20. 1 hit.
    InterProi IPR016114. ASFV_p72.
    IPR016111. Hexon_subdom4.
    IPR007542. Virus_major_coat_C.
    IPR016112. VP_dsDNA_II.
    [Graphical view ]
    Pfami PF04451. Capsid_NCLDV. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49749. SSF49749. 2 hits.
    ProtoNeti Search...

    Publicationsi

    1. "Molecular cloning, characterization, and expression of the Tipula iridescent virus capsid gene."
      Tajbakhsh S., Lee P.E., Watson D.C., Seligy V.L.
      J. Virol. 64:125-136(1990) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], PARTIAL PROTEIN SEQUENCE.

    Entry informationi

    Entry nameiMCP_IRV1
    AccessioniPrimary (citable) accession number: P18162
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 1, 1990
    Last sequence update: November 1, 1990
    Last modified: October 1, 2014
    This is version 62 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programViral Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Direct protein sequencing

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3