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Protein

50S ribosomal protein L31e

Gene

rpl31e

Organism
Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Binds to the 23S rRNA. Located at the polypeptide exit tunnel on the outside of the subunit.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L31e
Alternative name(s):
Hl30
L34
Gene namesi
Name:rpl31e
Ordered Locus Names:rrnAC3113
OrganismiHaloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui)
Taxonomic identifieri272569 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaHalobacteriaHalobacterialesHaloarculaceaeHaloarcula
Proteomesi
  • UP000001169 Componenti: Chromosome I

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemoved1 Publication
ChainiPRO_00001537912 – 9250S ribosomal protein L31eAdd BLAST91

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei2N-acetylserine1 Publication1

Keywords - PTMi

Acetylation

PTM databases

iPTMnetiP18138

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.2 Publications

Protein-protein interaction databases

STRINGi272569.rrnAC3113

Structurei

Secondary structure

192
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi9 – 14Combined sources6
Helixi16 – 20Combined sources5
Helixi23 – 25Combined sources3
Helixi26 – 41Combined sources16
Helixi46 – 48Combined sources3
Beta strandi49 – 51Combined sources3
Helixi53 – 59Combined sources7
Turni60 – 62Combined sources3
Turni63 – 65Combined sources3
Beta strandi69 – 78Combined sources10
Turni79 – 82Combined sources4
Beta strandi83 – 87Combined sources5

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1FFKX-ray2.40U2-92[»]
1JJ2X-ray2.40W2-92[»]
1K73X-ray3.01Y2-92[»]
1K8AX-ray3.00Y2-92[»]
1K9MX-ray3.00Y2-92[»]
1KC8X-ray3.01Y2-92[»]
1KD1X-ray3.00Y2-92[»]
1KQSX-ray3.10W2-92[»]
1M1KX-ray3.20Y2-92[»]
1M90X-ray2.80Y2-92[»]
1N8RX-ray3.00Y2-92[»]
1NJIX-ray3.00Y2-92[»]
1Q7YX-ray3.20Y2-92[»]
1Q81X-ray2.95Y2-92[»]
1Q82X-ray2.98Y2-92[»]
1Q86X-ray3.00Y2-92[»]
1QVFX-ray3.10W2-92[»]
1QVGX-ray2.90W2-92[»]
1S72X-ray2.40X1-92[»]
1VQ4X-ray2.70X1-92[»]
1VQ5X-ray2.60X1-92[»]
1VQ6X-ray2.70X1-92[»]
1VQ7X-ray2.50X1-92[»]
1VQ8X-ray2.20X1-92[»]
1VQ9X-ray2.40X1-92[»]
1VQKX-ray2.30X1-92[»]
1VQLX-ray2.30X1-92[»]
1VQMX-ray2.30X1-92[»]
1VQNX-ray2.40X1-92[»]
1VQOX-ray2.20X1-92[»]
1VQPX-ray2.25X1-92[»]
1W2BX-ray3.50W2-92[»]
1YHQX-ray2.40X1-92[»]
1YI2X-ray2.65X1-92[»]
1YIJX-ray2.60X1-92[»]
1YITX-ray2.80X1-92[»]
1YJ9X-ray2.90X1-92[»]
1YJNX-ray3.00X1-92[»]
1YJWX-ray2.90X1-92[»]
2OTJX-ray2.90X1-92[»]
2OTLX-ray2.70X1-92[»]
2QA4X-ray3.00X1-92[»]
2QEXX-ray2.90X1-92[»]
3CC2X-ray2.40X1-92[»]
3CC4X-ray2.70X1-92[»]
3CC7X-ray2.70X1-92[»]
3CCEX-ray2.75X1-92[»]
3CCJX-ray2.70X1-92[»]
3CCLX-ray2.90X1-92[»]
3CCMX-ray2.55X1-92[»]
3CCQX-ray2.90X1-92[»]
3CCRX-ray3.00X1-92[»]
3CCSX-ray2.95X1-92[»]
3CCUX-ray2.80X1-92[»]
3CCVX-ray2.90X1-92[»]
3CD6X-ray2.75X1-92[»]
3CMAX-ray2.80X1-92[»]
3CMEX-ray2.95X1-92[»]
3CPWX-ray2.70W1-92[»]
3CXCX-ray3.00W2-92[»]
3G4SX-ray3.20X8-89[»]
3G6EX-ray2.70X8-89[»]
3G71X-ray2.85X8-89[»]
3I55X-ray3.11X1-92[»]
3I56X-ray2.90X1-92[»]
3OW2X-ray2.70W8-89[»]
4ADXelectron microscopy6.60X1-92[»]
4V9FX-ray2.40X1-92[»]
ProteinModelPortaliP18138
SMRiP18138
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP18138

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiarCOG04473 Archaea
COG2097 LUCA
HOGENOMiHOG000230616
KOiK02910
OMAiRSNPPRK
OrthoDBiPOG093Z0J08

Family and domain databases

CDDicd00463 Ribosomal_L31e, 1 hit
Gene3Di3.10.440.10, 1 hit
HAMAPiMF_00410 Ribosomal_L31e, 1 hit
InterProiView protein in InterPro
IPR000054 Ribosomal_L31e
IPR020052 Ribosomal_L31e_CS
IPR023621 Ribosomal_L31e_dom_sf
PANTHERiPTHR10956 PTHR10956, 1 hit
PfamiView protein in Pfam
PF01198 Ribosomal_L31e, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD006030 Ribosomal_L31e, 1 hit
SMARTiView protein in SMART
SM01380 Ribosomal_L31e, 1 hit
SUPFAMiSSF54575 SSF54575, 1 hit
PROSITEiView protein in PROSITE
PS01144 RIBOSOMAL_L31E, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P18138-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSASDFEERV VTIPLRDARA EPNHKRADKA MILIREHLAK HFSVDEDAVR
60 70 80 90
LDPSINEAAW ARGRANTPSK IRVRAARFEE EGEAIVEAET AE
Length:92
Mass (Da):10,367
Last modified:January 23, 2007 - v2
Checksum:i0FF505E03E8F6C4A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X55007 Genomic DNA Translation: CAA38751.1
AY596297 Genomic DNA Translation: AAV47824.1
PIRiS13067 R5HSER
RefSeqiWP_004964660.1, NC_006396.1

Genome annotation databases

EnsemblBacteriaiAAV47824; AAV47824; rrnAC3113
GeneIDi3128100
KEGGihma:rrnAC3113
PATRICifig|272569.17.peg.3655

Similar proteinsi

Entry informationi

Entry nameiRL31_HALMA
AccessioniPrimary (citable) accession number: P18138
Secondary accession number(s): Q5UY29
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1990
Last sequence update: January 23, 2007
Last modified: March 28, 2018
This is version 130 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome
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Main funding by: National Institutes of Health