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P17881 (NCAP_SEOUS) Reviewed, UniProtKB/Swiss-Prot

Last modified October 16, 2013. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Nucleoprotein
Alternative name(s):
Nucleocapsid protein
Short name=Protein N
Gene names
Name:N
OrganismSeoul virus (strain SR-11) (Sapporo rat virus)
Taxonomic identifier11610 [NCBI]
Taxonomic lineageVirusesssRNA negative-strand virusesBunyaviridaeHantavirus
Virus hostHomo sapiens (Human) [TaxID: 9606]
Rattus norvegicus (Rat) [TaxID: 10116]
Rattus rattus (Black rat) [TaxID: 10117]

Protein attributes

Sequence length429 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Subcellular location

Virion. Note: Internal protein of virus particle.

Sequence similarities

Belongs to the hantavirus nucleocapsid protein family.

Ontologies

Keywords
   Cellular componentCapsid protein
Helical capsid protein
Virion
   LigandRNA-binding
Viral nucleoprotein
   Molecular functionRibonucleoprotein
Gene Ontology (GO)
   Cellular_componenthelical viral capsid

Inferred from electronic annotation. Source: UniProtKB-KW

ribonucleoprotein complex

Inferred from electronic annotation. Source: UniProtKB-KW

viral nucleocapsid

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionRNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 429429Nucleoprotein
PRO_0000222018

Sequences

Sequence LengthMass (Da)Tools
P17881 [UniParc].

Last modified August 1, 1990. Version 1.
Checksum: E838B9F2F966C974

FASTA42948,181
        10         20         30         40         50         60 
MATMEEIQRE ISAHEGQLVI ARQKVKDAEK QYEKDPDDLN KRALHDRESV AASIQSKIDE 

        70         80         90        100        110        120 
LKRQLADRLQ QGRTSGQDRD PTGVEPGDHL KERSALSYGN TLDLNSLDID EPTGQTADWL 

       130        140        150        160        170        180 
TIIVYLTSFV VPIILKALYM LTTRGRQTSK DNKGMRIRFK DDSSYEDVNG IRKPKHLYVS 

       190        200        210        220        230        240 
MPNAQSSMKA EEITPGRFRT AVCGLYPAQI KARNMVSPVM SVVGFLALAK DWTSRIEEWL 

       250        260        270        280        290        300 
GAPCKFMAES LIAGSLSGNP VNRDYIRQRQ GALAGMEPKE FQALRQHSKD AGCTLVEHIE 

       310        320        330        340        350        360 
SPSSIWVFAG APDRCPPTCL FVGGMAELGA FFSILQDMRN TIMASKTVGT ADEKLRKKSS 

       370        380        390        400        410        420 
FYQSYLRRTQ SMGIQLDQRI IVMFMVAWGK EAVDNFHLGD DMDPELRSLA QILIDQKVKE 


ISNQEPMKL 

« Hide

References

[1]"Coding properties of the S and the M genome segments of Sapporo rat virus: comparison to other causative agents of hemorrhagic fever with renal syndrome."
Arikawa J., Lapenotiere H.F., Iacono-Connors L., Wang M., Schmaljohn C.S.
Virology 176:114-125(1990) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
M34881 Genomic RNA. Translation: AAA47826.1.
PIRVHVUSR. A34601.

3D structure databases

ProteinModelPortalP17881.
SMRP17881. Positions 1-72.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

InterProIPR002214. Hanta_nucleocap.
[Graphical view]
PfamPF00846. Hanta_nucleocap. 1 hit.
[Graphical view]
PIRSFPIRSF003949. N_HantaV. 1 hit.
ProDomPD001501. Hanta_nucleocap. 1 hit.
[Graphical view] [Entries sharing at least one domain]
ProtoNetSearch...

Entry information

Entry nameNCAP_SEOUS
AccessionPrimary (citable) accession number: P17881
Entry history
Integrated into UniProtKB/Swiss-Prot: August 1, 1990
Last sequence update: August 1, 1990
Last modified: October 16, 2013
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families