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Protein

Nucleoprotein

Gene

N

Organism
Seoul virus (strain SR-11) (Sapporo rat virus)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein

Keywords - Ligandi

RNA-binding, Viral nucleoprotein

Names & Taxonomyi

Protein namesi
Recommended name:
Nucleoprotein
Alternative name(s):
Nucleocapsid protein
Short name:
Protein N
Gene namesi
Name:N
OrganismiSeoul virus (strain SR-11) (Sapporo rat virus)
Taxonomic identifieri11610 [NCBI]
Taxonomic lineageiVirusesssRNA virusesssRNA negative-strand virusesBunyaviridaeHantavirus
Virus hostiHomo sapiens (Human) [TaxID: 9606]
Rattus norvegicus (Rat) [TaxID: 10116]
Rattus rattus (Black rat) [TaxID: 10117]

Subcellular locationi

  • Virion

  • Note: Internal protein of virus particle.

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Capsid protein, Helical capsid protein, Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 429429NucleoproteinPRO_0000222018Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliP17881.
SMRiP17881. Positions 1-72.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Family and domain databases

InterProiIPR002214. Hanta_nucleocap.
[Graphical view]
PfamiPF00846. Hanta_nucleocap. 1 hit.
[Graphical view]
PIRSFiPIRSF003949. N_HantaV. 1 hit.
ProDomiPD001501. Hanta_nucleocap. 1 hit.
[Graphical view] [Entries sharing at least one domain]

Sequencei

Sequence statusi: Complete.

P17881-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATMEEIQRE ISAHEGQLVI ARQKVKDAEK QYEKDPDDLN KRALHDRESV
60 70 80 90 100
AASIQSKIDE LKRQLADRLQ QGRTSGQDRD PTGVEPGDHL KERSALSYGN
110 120 130 140 150
TLDLNSLDID EPTGQTADWL TIIVYLTSFV VPIILKALYM LTTRGRQTSK
160 170 180 190 200
DNKGMRIRFK DDSSYEDVNG IRKPKHLYVS MPNAQSSMKA EEITPGRFRT
210 220 230 240 250
AVCGLYPAQI KARNMVSPVM SVVGFLALAK DWTSRIEEWL GAPCKFMAES
260 270 280 290 300
LIAGSLSGNP VNRDYIRQRQ GALAGMEPKE FQALRQHSKD AGCTLVEHIE
310 320 330 340 350
SPSSIWVFAG APDRCPPTCL FVGGMAELGA FFSILQDMRN TIMASKTVGT
360 370 380 390 400
ADEKLRKKSS FYQSYLRRTQ SMGIQLDQRI IVMFMVAWGK EAVDNFHLGD
410 420
DMDPELRSLA QILIDQKVKE ISNQEPMKL
Length:429
Mass (Da):48,181
Last modified:August 1, 1990 - v1
Checksum:iE838B9F2F966C974
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M34881 Genomic RNA. Translation: AAA47826.1.
PIRiA34601. VHVUSR.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M34881 Genomic RNA. Translation: AAA47826.1.
PIRiA34601. VHVUSR.

3D structure databases

ProteinModelPortaliP17881.
SMRiP17881. Positions 1-72.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

InterProiIPR002214. Hanta_nucleocap.
[Graphical view]
PfamiPF00846. Hanta_nucleocap. 1 hit.
[Graphical view]
PIRSFiPIRSF003949. N_HantaV. 1 hit.
ProDomiPD001501. Hanta_nucleocap. 1 hit.
[Graphical view] [Entries sharing at least one domain]
ProtoNetiSearch...

Publicationsi

  1. "Coding properties of the S and the M genome segments of Sapporo rat virus: comparison to other causative agents of hemorrhagic fever with renal syndrome."
    Arikawa J., Lapenotiere H.F., Iacono-Connors L., Wang M., Schmaljohn C.S.
    Virology 176:114-125(1990) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Entry informationi

Entry nameiNCAP_SEOUS
AccessioniPrimary (citable) accession number: P17881
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 1, 1990
Last sequence update: August 1, 1990
Last modified: June 24, 2015
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.