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Protein

Malate synthase, glyoxysomal

Gene
N/A
Organism
Ricinus communis (Castor bean)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Acetyl-CoA + H2O + glyoxylate = (S)-malate + CoA.

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei182 – 1821Proton acceptorBy similarity
Active sitei468 – 4681Proton donorBy similarity

GO - Molecular functioni

  1. malate synthase activity Source: UniProtKB-EC

GO - Biological processi

  1. glyoxylate cycle Source: UniProtKB-UniPathway
  2. tricarboxylic acid cycle Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Transferase

Keywords - Biological processi

Glyoxylate bypass, Tricarboxylic acid cycle

Enzyme and pathway databases

BRENDAi2.3.3.9. 1204.
UniPathwayiUPA00703; UER00720.

Names & Taxonomyi

Protein namesi
Recommended name:
Malate synthase, glyoxysomal (EC:2.3.3.9)
OrganismiRicinus communis (Castor bean)
Taxonomic identifieri3988 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesEuphorbiaceaeAcalyphoideaeAcalypheaeRicinus

Subcellular locationi

GO - Cellular componenti

  1. glyoxysome Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Glyoxysome, Peroxisome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 567567Malate synthase, glyoxysomalPRO_0000166872Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliP17815.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Motif

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Motifi565 – 5673Microbody targeting signalSequence Analysis

Sequence similaritiesi

Belongs to the malate synthase family.Curated

Family and domain databases

InterProiIPR011076. Malate_synth-like.
IPR006252. Malate_synthA.
IPR001465. Malate_synthase.
IPR019830. Malate_synthase_CS.
[Graphical view]
PfamiPF01274. Malate_synthase. 1 hit.
[Graphical view]
PIRSFiPIRSF001363. Malate_synth. 1 hit.
SUPFAMiSSF51645. SSF51645. 1 hit.
TIGRFAMsiTIGR01344. malate_syn_A. 1 hit.
PROSITEiPS00510. MALATE_SYNTHASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P17815-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRYDTYGDSA PIKKTGAGYD VPEGVDIRGR YDGEFAKILT RDALQFVADL
60 70 80 90 100
QREFRNRIRY AIECRKEAKS RYNAGALPGF EHPATKYIRE GEWTCAPVPP
110 120 130 140 150
AVADRKVEIT GPVERKMIIN ALNSGAKVFM ADFEDALSPS WENLMRGQVN
160 170 180 190 200
LRDAVNGTIS FHDKARNRVY KLNDQIAKLF VRPRGWHLPE AHILIDGEPA
210 220 230 240 250
TGCLVDFGLY FYHNYAAFRR NQGAGYGPFF YLPKMEHSRE AKIWNCVFEK
260 270 280 290 300
AEKMAGIERG SIRATVLIET LPAVFQMNEI LYELRDHSVG LNCGRWDYIF
310 320 330 340 350
SYVKTFQAHP DRPLPDRVQV GMTQHFMKSY SDLLVWTCHR RGVHAMGGMA
360 370 380 390 400
AQIPIRDDPA ANKAALELVR KDKLREVKAG HDGTWAAHPG LIPACMEVFA
410 420 430 440 450
NNMGNTPHQI QAMKREDAAN ITEEDLIQRP RGVRTLEGLR LNTRVGIQYL
460 470 480 490 500
AAWLTGTGSV PLYNLMEDAA TAEISRVQNW QWLKYGVELD GDGLGVKVTF
510 520 530 540 550
DLLGRVVEDE MARIEREVGK EKFKKGMYKE ACKMFVRQCA APTLDDFLTL
560
DAYNNIVIHY PKGSSRL
Length:567
Mass (Da):64,263
Last modified:August 1, 1990 - v1
Checksum:i3888DCAF87CD36E2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X52806 mRNA. Translation: CAA36994.1.
PIRiS14677. SYCSM2.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X52806 mRNA. Translation: CAA36994.1.
PIRiS14677. SYCSM2.

3D structure databases

ProteinModelPortaliP17815.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Enzyme and pathway databases

UniPathwayiUPA00703; UER00720.
BRENDAi2.3.3.9. 1204.

Family and domain databases

InterProiIPR011076. Malate_synth-like.
IPR006252. Malate_synthA.
IPR001465. Malate_synthase.
IPR019830. Malate_synthase_CS.
[Graphical view]
PfamiPF01274. Malate_synthase. 1 hit.
[Graphical view]
PIRSFiPIRSF001363. Malate_synth. 1 hit.
SUPFAMiSSF51645. SSF51645. 1 hit.
TIGRFAMsiTIGR01344. malate_syn_A. 1 hit.
PROSITEiPS00510. MALATE_SYNTHASE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Nucleotide sequence analysis of a cDNA clone encoding malate synthase of castor bean (Ricinus communis) reveals homology to DAL7, a gene involved in allantoin degradation in Saccharomyces cerevisiae."
    Rodriguez D., Ginger R.S., Baker A., Northcote D.H.
    Plant Mol. Biol. 15:501-504(1989) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Tissue: Endosperm.

Entry informationi

Entry nameiMASY_RICCO
AccessioniPrimary (citable) accession number: P17815
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 1, 1990
Last sequence update: August 1, 1990
Last modified: April 1, 2015
This is version 79 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.