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P17461

- MP1_TCV

UniProt

P17461 - MP1_TCV

Protein

Double gene block protein 1

Gene

ORF2

Organism
Turnip crinkle virus (TCV)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
  1. Functioni

    Cell-to-cell movement. Displays RNA-binding activity By similarity.By similarity

    GO - Molecular functioni

    1. RNA binding Source: UniProtKB-KW

    GO - Biological processi

    1. transmission of virus Source: InterPro
    2. transport of virus in host, cell to cell Source: UniProtKB-KW

    Keywords - Molecular functioni

    Viral movement protein

    Keywords - Biological processi

    Transport

    Keywords - Ligandi

    RNA-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Double gene block protein 1
    Short name:
    DGBp1
    Alternative name(s):
    Movement protein P8
    Gene namesi
    ORF Names:ORF2
    OrganismiTurnip crinkle virus (TCV)
    Taxonomic identifieri11988 [NCBI]
    Taxonomic lineageiVirusesssRNA positive-strand viruses, no DNA stageTombusviridaeCarmovirus
    Virus hostiBrassica napus subsp. rapifera [TaxID: 3709]
    Hypomyces [TaxID: 5130]
    Moricandia arvensis (Purple mistress) (Brassica arvensis) [TaxID: 180540]
    ProteomesiUP000007403: Genome, UP000009133: Genome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 7272Double gene block protein 1PRO_0000222897Add
    BLAST

    Interactioni

    Subunit structurei

    Interacts with Arabidopsis thaliana RCD1.1 Publication

    Family & Domainsi

    Sequence similaritiesi

    Family and domain databases

    InterProiIPR007982. Tombusvirus_movement.
    [Graphical view]
    PfamiPF05318. Tombus_movement. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P17461-1 [UniParc]FASTAAdd to Basket

    « Hide

    MDPERIPYNS LSDSDATGKR KKGGEKSAKK RLVASHAASS VLNKKRNEGS   50
    ASHGGTWVIV ADKVEVSINF NF 72
    Length:72
    Mass (Da):7,774
    Last modified:August 1, 1990 - v1
    Checksum:i64E6CB66C0468E07
    GO

    Natural variant

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Natural varianti17 – 171T → P in strain: Infectious clone UK.
    Natural varianti41 – 411V → A in strain: Infectious clone UK.
    Natural varianti47 – 471N → D in strain: Infectious clone UK.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    M22445 Genomic RNA. Translation: AAA96970.1.
    AY312063 Genomic RNA. Translation: AAP78487.1.
    PIRiJA0112. WMVETC.
    RefSeqiNP_620722.1. NC_003821.3.

    Genome annotation databases

    GeneIDi944393.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    M22445 Genomic RNA. Translation: AAA96970.1 .
    AY312063 Genomic RNA. Translation: AAP78487.1 .
    PIRi JA0112. WMVETC.
    RefSeqi NP_620722.1. NC_003821.3.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 944393.

    Family and domain databases

    InterProi IPR007982. Tombusvirus_movement.
    [Graphical view ]
    Pfami PF05318. Tombus_movement. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].
    2. Ryabov E.V.
      Submitted (JUN-2003) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].
      Strain: Infectious clone UK.
    3. "An Arabidopsis thaliana protein interacts with a movement protein of Turnip crinkle virus in yeast cells and in vitro."
      Lin B., Heaton L.A.
      J. Gen. Virol. 82:1245-1251(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: INTERACTION WITH ARABIDOPSIS THALIANA RCD1.

    Entry informationi

    Entry nameiMP1_TCV
    AccessioniPrimary (citable) accession number: P17461
    Secondary accession number(s): Q7TD20
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: August 1, 1990
    Last sequence update: August 1, 1990
    Last modified: October 1, 2014
    This is version 36 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programViral Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3