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P17461 (MP1_TCV) Reviewed, UniProtKB/Swiss-Prot

Last modified July 9, 2014. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Double gene block protein 1

Short name=DGBp1
Alternative name(s):
Movement protein P8
Gene names
ORF Names:ORF2
OrganismTurnip crinkle virus (TCV) [Complete proteome]
Taxonomic identifier11988 [NCBI]
Taxonomic lineageVirusesssRNA positive-strand viruses, no DNA stageTombusviridaeCarmovirus
Virus hostBrassica napus subsp. rapifera [TaxID: 3709]
Hypomyces [TaxID: 5130]
Moricandia arvensis (Purple mistress) (Brassica arvensis) [TaxID: 180540]

Protein attributes

Sequence length72 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Cell-to-cell movement. Displays RNA-binding activity By similarity.

Subunit structure

Interacts with Arabidopsis thaliana RCD1. Ref.3

Sequence similarities

Belongs to the carmovirus double gene block protein 1 family.

Ontologies

Keywords
   Biological processTransport
   LigandRNA-binding
   Molecular functionViral movement protein
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processtransmission of virus

Inferred from electronic annotation. Source: InterPro

transport of virus in host, cell to cell

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionRNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 7272Double gene block protein 1
PRO_0000222897

Natural variations

Natural variant171T → P in strain: Infectious clone UK.
Natural variant411V → A in strain: Infectious clone UK.
Natural variant471N → D in strain: Infectious clone UK.

Sequences

Sequence LengthMass (Da)Tools
P17461 [UniParc].

Last modified August 1, 1990. Version 1.
Checksum: 64E6CB66C0468E07

FASTA727,774
        10         20         30         40         50         60 
MDPERIPYNS LSDSDATGKR KKGGEKSAKK RLVASHAASS VLNKKRNEGS ASHGGTWVIV 

        70 
ADKVEVSINF NF 

« Hide

References

[1]"The genome structure of turnip crinkle virus."
Carrington J.C., Heaton L.A., Zuidema D., Hillman B.I., Morris T.J.
Virology 170:219-226(1989) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].
[2]Ryabov E.V.
Submitted (JUN-2003) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].
Strain: Infectious clone UK.
[3]"An Arabidopsis thaliana protein interacts with a movement protein of Turnip crinkle virus in yeast cells and in vitro."
Lin B., Heaton L.A.
J. Gen. Virol. 82:1245-1251(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: INTERACTION WITH ARABIDOPSIS THALIANA RCD1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
M22445 Genomic RNA. Translation: AAA96970.1.
AY312063 Genomic RNA. Translation: AAP78487.1.
PIRWMVETC. JA0112.
RefSeqNP_620722.1. NC_003821.3.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID944393.

Family and domain databases

InterProIPR007982. Tombusvirus_movement.
[Graphical view]
PfamPF05318. Tombus_movement. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameMP1_TCV
AccessionPrimary (citable) accession number: P17461
Secondary accession number(s): Q7TD20
Entry history
Integrated into UniProtKB/Swiss-Prot: August 1, 1990
Last sequence update: August 1, 1990
Last modified: July 9, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families