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Protein

30S ribosomal protein S7

Gene

rpsG

Organism
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Functioni

One of the primary rRNA binding proteins, it binds directly to 3'-end of the 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center. Binds mRNA and the E site tRNA blocking its exit path in the ribosome. This blockage implies that this section of the ribosome must be able to move to release the deacetylated tRNA.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding, tRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S7
Gene namesi
Name:rpsG
Synonyms:rps7
Ordered Locus Names:TTHA1696
OrganismiThermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Taxonomic identifieri300852 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
Proteomesi
  • UP000000532 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Pathology & Biotechi

Chemistry databases

DrugBankiDB08185. 2-METHYLTHIO-N6-ISOPENTENYL-ADENOSINE-5'-MONOPHOSPHATE.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemoved1 Publication
ChainiPRO_00001243692 – 15630S ribosomal protein S7Add BLAST155

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit. Contacts proteins S9 and S11. Binds to the C-terminus of IF3 and to the C-terminus of Era.

Protein-protein interaction databases

IntActiP17291. 1 interactor.
MINTiMINT-112129.
STRINGi300852.TTHA1696.

Structurei

Secondary structure

1156
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Turni16 – 18Combined sources3
Helixi21 – 30Combined sources10
Helixi36 – 54Combined sources19
Helixi58 – 69Combined sources12
Beta strandi72 – 80Combined sources9
Beta strandi83 – 90Combined sources8
Helixi93 – 108Combined sources16
Beta strandi111 – 115Combined sources5
Helixi116 – 128Combined sources13
Helixi133 – 145Combined sources13
Helixi149 – 154Combined sources6

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1DV4X-ray4.50G12-146[»]
1FJGX-ray3.00G1-156[»]
1FKAX-ray3.30G1-151[»]
1HNWX-ray3.40G1-156[»]
1HNXX-ray3.40G1-156[»]
1HNZX-ray3.30G1-156[»]
1HR0X-ray3.20G1-156[»]
1I94X-ray3.20G2-156[»]
1I95X-ray4.50G2-156[»]
1I96X-ray4.20G2-156[»]
1I97X-ray4.50G2-156[»]
1IBKX-ray3.31G1-156[»]
1IBLX-ray3.11G1-156[»]
1IBMX-ray3.31G1-156[»]
1J5EX-ray3.05G2-156[»]
1JGOX-ray5.60J1-156[»]
1JGPX-ray7.00J1-156[»]
1JGQX-ray5.00J1-156[»]
1L1Umodel-G1-156[»]
1N32X-ray3.00G2-156[»]
1N33X-ray3.35G2-156[»]
1N34X-ray3.80G2-156[»]
1N36X-ray3.65G2-156[»]
1QD7X-ray5.50F12-146[»]
1RSSX-ray1.90A7-156[»]
1TWTmodel-J2-156[»]
1VVJX-ray3.44QG/XG1-156[»]
1VY4X-ray2.60AG/CG1-156[»]
1VY5X-ray2.55AG/CG1-156[»]
1VY6X-ray2.90AG/CG1-156[»]
1VY7X-ray2.80AG/CG1-156[»]
1X18electron microscopy13.50F2-156[»]
1XMOX-ray3.25G1-156[»]
1XMQX-ray3.00G1-156[»]
1XNQX-ray3.05G1-156[»]
1XNRX-ray3.10G1-156[»]
2E5LX-ray3.30G2-156[»]
2F4VX-ray3.80G1-156[»]
2HHHX-ray3.35G1-156[»]
2UU9X-ray3.10G2-156[»]
2UUAX-ray2.90G2-156[»]
2UUBX-ray2.80G2-156[»]
2UUCX-ray3.10G2-156[»]
2UXBX-ray3.10G2-156[»]
2UXCX-ray2.90G2-156[»]
2UXDX-ray3.20G2-156[»]
2VQEX-ray2.50G1-156[»]
2VQFX-ray2.90G1-156[»]
2ZM6X-ray3.30G2-156[»]
3OTOX-ray3.69G1-156[»]
3T1HX-ray3.11G1-156[»]
3T1YX-ray2.80G1-156[»]
4AQYX-ray3.50G2-156[»]
4B3MX-ray2.90G2-156[»]
4B3RX-ray3.00G2-156[»]
4B3SX-ray3.15G2-156[»]
4B3TX-ray3.00G2-156[»]
4DR1X-ray3.60G1-156[»]
4DR2X-ray3.25G1-156[»]
4DR3X-ray3.35G1-156[»]
4DR4X-ray3.97G1-156[»]
4DR5X-ray3.45G1-156[»]
4DR6X-ray3.30G1-156[»]
4DR7X-ray3.75G1-156[»]
4DUYX-ray3.39G1-156[»]
4DUZX-ray3.65G1-156[»]
4DV0X-ray3.85G1-156[»]
4DV1X-ray3.85G1-156[»]
4DV2X-ray3.65G1-156[»]
4DV3X-ray3.55G1-156[»]
4DV4X-ray3.65G1-156[»]
4DV5X-ray3.68G1-156[»]
4DV6X-ray3.30G1-156[»]
4DV7X-ray3.29G1-156[»]
4GKJX-ray3.30G2-156[»]
4GKKX-ray3.20G2-156[»]
4JI0X-ray3.49G1-156[»]
4JI1X-ray3.14G1-156[»]
4JI2X-ray3.64G1-156[»]
4JI3X-ray3.35G1-156[»]
4JI4X-ray3.69G1-156[»]
4JI5X-ray3.85G1-156[»]
4JI6X-ray3.55G1-156[»]
4JI7X-ray3.50G1-156[»]
4JI8X-ray3.74G1-156[»]
4JV5X-ray3.16G2-156[»]
4JYAX-ray3.10G2-156[»]
4K0KX-ray3.40G2-156[»]
4KHPX-ray3.10G2-156[»]
4L47X-ray3.22QG/XG1-156[»]
4L71X-ray3.90QG/XG1-156[»]
4LELX-ray3.90QG/XG1-156[»]
4LF4X-ray3.34G1-156[»]
4LF5X-ray3.75G1-156[»]
4LF6X-ray3.31G1-156[»]
4LF7X-ray3.15G1-156[»]
4LF8X-ray3.15G1-156[»]
4LF9X-ray3.28G1-156[»]
4LFAX-ray3.65G1-156[»]
4LFBX-ray3.01G1-156[»]
4LFCX-ray3.60G1-156[»]
4LFZX-ray3.92QG/XG1-156[»]
4LNTX-ray2.94QG/XG1-156[»]
4LSKX-ray3.48QG/XG1-156[»]
4LT8X-ray3.14QG/XG1-156[»]
4NXMX-ray3.65G1-156[»]
4NXNX-ray3.54G1-156[»]
4OX9X-ray3.80G2-156[»]
4P6FX-ray3.60QG/XG1-156[»]
4P70X-ray3.68QG/XG1-156[»]
4TUAX-ray3.60QG/XG1-156[»]
4TUBX-ray3.60QG/XG1-156[»]
4TUCX-ray3.60QG/XG1-156[»]
4TUDX-ray3.60QG/XG1-156[»]
4TUEX-ray3.50QG/XG1-156[»]
4V42X-ray5.50AJ1-156[»]
4V49X-ray8.70G2-156[»]
4V4AX-ray9.50G2-156[»]
4V4IX-ray3.71h-[»]
4V4PX-ray5.50BJ1-156[»]
4V4RX-ray5.90AG1-156[»]
4V4SX-ray6.76AG1-156[»]
4V4TX-ray6.46AG1-156[»]
4V4XX-ray5.00AJ1-156[»]
4V4YX-ray5.50AJ1-156[»]
4V4ZX-ray4.51AJ1-156[»]
4V51X-ray2.80AG/CG2-156[»]
4V5AX-ray3.50AG/CG2-156[»]
4V5CX-ray3.30AG/CG1-156[»]
4V5DX-ray3.50AG/CG1-156[»]
4V5EX-ray3.45AG/CG1-156[»]
4V5FX-ray3.60AG/CG1-156[»]
4V5GX-ray3.60AG/CG1-156[»]
4V5JX-ray3.10AG/CG1-156[»]
4V5KX-ray3.20AG/CG1-156[»]
4V5LX-ray3.10AG1-156[»]
4V5Melectron microscopy7.80AG1-156[»]
4V5Nelectron microscopy7.60AG1-156[»]
4V5PX-ray3.10AG/CG1-156[»]
4V5QX-ray3.10AG/CG1-156[»]
4V5RX-ray3.10AG/CG1-156[»]
4V5SX-ray3.10AG/CG1-156[»]
4V68electron microscopy6.40AG2-156[»]
4V6AX-ray3.10AG/CG1-156[»]
4V6FX-ray3.10BJ/CJ1-156[»]
4V6GX-ray3.50AJ/CJ1-156[»]
4V7JX-ray3.30Ag/Bg1-156[»]
4V7KX-ray3.60Ag/Bg1-156[»]
4V7LX-ray3.00AG/CG1-156[»]
4V7MX-ray3.45AG/CG1-156[»]
4V7WX-ray3.00AG/CG1-156[»]
4V7XX-ray3.00AG/CG1-156[»]
4V7YX-ray3.00AG/CG1-156[»]
4V7ZX-ray3.10AG/CG1-156[»]
4V87X-ray3.10BJ/CJ1-156[»]
4V8AX-ray3.20CG/DG1-156[»]
4V8BX-ray3.00AJ/CJ1-156[»]
4V8CX-ray3.30CJ/DJ1-156[»]
4V8DX-ray3.00AJ/CJ1-156[»]
4V8EX-ray3.30BJ/DJ1-156[»]
4V8FX-ray3.30BJ/CJ1-156[»]
4V8GX-ray3.00AG/CG1-156[»]
4V8HX-ray3.10AG/CG1-156[»]
4V8IX-ray2.70AG/CG1-156[»]
4V8JX-ray3.90AG/CG1-156[»]
4V8NX-ray3.10AG/CG1-156[»]
4V8OX-ray3.80AG1-156[»]
4V8QX-ray3.10BG1-156[»]
4V8UX-ray3.70AG/CG1-156[»]
4V8XX-ray3.35AG/CG1-156[»]
4V90X-ray2.95AG1-156[»]
4V95X-ray3.20AG/CG1-156[»]
4V97X-ray3.52AG/CG1-156[»]
4V9AX-ray3.30AJ/CJ1-156[»]
4V9BX-ray3.10AJ/CJ1-156[»]
4V9HX-ray2.86AG2-156[»]
4V9IX-ray3.30AG/CG2-156[»]
4V9RX-ray3.00AG/CG1-156[»]
4V9SX-ray3.10AG/CG1-156[»]
4W2EX-ray2.90g1-156[»]
4W2FX-ray2.40AG/CG1-156[»]
4W2GX-ray2.55AG/CG1-156[»]
4W2HX-ray2.70AG/CG1-156[»]
4W2IX-ray2.70AG/CG1-156[»]
4W4GX-ray3.30QG/XG1-156[»]
4WPOX-ray2.80BG/DG1-156[»]
4WQ1X-ray3.1062/6E1-156[»]
4WQFX-ray2.80BG/DG1-156[»]
4WQRX-ray3.1562/6E1-156[»]
4WQUX-ray2.80BG/DG1-156[»]
4WQYX-ray2.80BG/DG1-156[»]
4WR6X-ray3.0562/6E1-156[»]
4WRAX-ray3.0562/6E1-156[»]
4WROX-ray3.056E1-156[»]
4WSDX-ray2.9562/6E1-156[»]
4WSMX-ray3.3062/6E1-156[»]
4WT1X-ray3.0562/6E1-156[»]
4WT8X-ray3.40AG/BG2-156[»]
4WU1X-ray3.2062/6E1-156[»]
4WZDX-ray3.1062/6E1-156[»]
4WZOX-ray3.3062/6E1-156[»]
4X62X-ray3.45G2-156[»]
4X64X-ray3.35G2-156[»]
4X65X-ray3.35G2-156[»]
4X66X-ray3.45G2-156[»]
4Y4OX-ray2.301g/2g1-156[»]
4Y4PX-ray2.501g/2g1-156[»]
4YHHX-ray3.42G2-156[»]
4YPBX-ray3.40QG/XG1-156[»]
4YY3X-ray3.60G1-156[»]
4YZVX-ray3.10QG/XG1-156[»]
4Z3SX-ray2.651g/2g1-156[»]
4Z8CX-ray2.901g/2g1-156[»]
4ZERX-ray3.101g/2g2-156[»]
4ZSNX-ray3.60QG/XG1-156[»]
5A9Zelectron microscopy4.70BK2-156[»]
5AA0electron microscopy5.00BK2-156[»]
5BR8X-ray3.40G1-156[»]
5CZPX-ray3.30QG/XG1-156[»]
5D8BX-ray3.63DC/HA1-156[»]
5DFEX-ray3.10QG/XG1-156[»]
5DOXX-ray3.101g/2g1-156[»]
5DOYX-ray2.601g/2g1-156[»]
5E7KX-ray3.2062/6E1-156[»]
5E81X-ray2.9562/6E1-156[»]
5EL4X-ray3.1562/6E1-156[»]
5EL5X-ray3.1562/6E1-156[»]
5EL6X-ray3.1062/6E1-156[»]
5EL7X-ray3.1562/6E1-156[»]
5F8KX-ray2.801g/2g2-156[»]
5FDUX-ray2.901g/2g2-156[»]
5FDVX-ray2.801g/2g2-156[»]
5HAUX-ray3.001g/2g1-156[»]
5HCPX-ray2.891g/2g1-156[»]
5HCQX-ray2.801g/2g1-156[»]
5HCRX-ray2.801g/2g1-156[»]
5HD1X-ray2.701g/2g1-156[»]
5IB7X-ray2.9962/6E1-156[»]
5IB8X-ray3.1362/6E1-156[»]
5IBBX-ray2.9662/6E1-156[»]
5IMQelectron microscopy3.80K1-156[»]
5IMRelectron microscopy-K1-156[»]
5IWAX-ray3.50G2-156[»]
5J30X-ray3.20QG/XG1-156[»]
5J3CX-ray3.04QG/XG1-156[»]
5J4BX-ray2.601g/2g1-156[»]
5J4CX-ray2.801g/2g1-156[»]
5J8BX-ray2.60g1-156[»]
5LMNelectron microscopy3.55G1-156[»]
5LMOelectron microscopy4.30G1-156[»]
5LMPelectron microscopy5.35G1-156[»]
5LMQelectron microscopy4.20G1-156[»]
5LMRelectron microscopy4.45G1-156[»]
5LMSelectron microscopy5.10G1-156[»]
5LMTelectron microscopy4.15G1-156[»]
5LMUelectron microscopy4.00G1-156[»]
5LMVelectron microscopy4.90G1-156[»]
ProteinModelPortaliP17291.
SMRiP17291.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP17291.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiENOG4108UHY. Bacteria.
COG0049. LUCA.
HOGENOMiHOG000039067.
KOiK02992.
OMAiTERLMNE.
PhylomeDBiP17291.

Family and domain databases

Gene3Di1.10.455.10. 1 hit.
HAMAPiMF_00480_B. Ribosomal_S7_B. 1 hit.
InterProiView protein in InterPro
IPR000235. Ribosomal_S5/S7.
IPR005717. Ribosomal_S7_bac/org-type.
IPR020606. Ribosomal_S7_CS.
IPR023798. Ribosomal_S7_dom.
PANTHERiPTHR11205. PTHR11205. 1 hit.
PfamiView protein in Pfam
PF00177. Ribosomal_S7. 1 hit.
PIRSFiPIRSF002122. RPS7p_RPS7a_RPS5e_RPS7o. 1 hit.
SUPFAMiSSF47973. SSF47973. 1 hit.
TIGRFAMsiTIGR01029. rpsG_bact. 1 hit.
PROSITEiView protein in PROSITE
PS00052. RIBOSOMAL_S7. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P17291-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARRRRAEVR QLQPDLVYGD VLVTAFINKI MRDGKKNLAA RIFYDACKII
60 70 80 90 100
QEKTGQEPLK VFKQAVENVK PRMEVRSRRV GGANYQVPME VSPRRQQSLA
110 120 130 140 150
LRWLVQAANQ RPERRAAVRI AHELMDAAEG KGGAVKKKED VERMAEANRA

YAHYRW
Length:156
Mass (Da):18,016
Last modified:January 23, 2007 - v3
Checksum:iBC20C4487623B0E9
GO

Mass spectrometryi

Molecular mass is 17886 Da from positions 2 - 156. Determined by MALDI. 1 Publication

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X52165 Genomic DNA. Translation: CAA36419.1.
AP008226 Genomic DNA. Translation: BAD71519.1.
RefSeqiWP_008633429.1. NC_006461.1.
YP_144962.1. NC_006461.1.

Genome annotation databases

EnsemblBacteriaiBAD71519; BAD71519; BAD71519.
GeneIDi3167931.
KEGGittj:TTHA1696.
PATRICifig|300852.9.peg.1666.

Similar proteinsi

Entry informationi

Entry nameiRS7_THET8
AccessioniPrimary (citable) accession number: P17291
Secondary accession number(s): Q5SHN4
Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 1, 1990
Last sequence update: January 23, 2007
Last modified: September 27, 2017
This is version 174 of the entry and version 3 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families