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Protein

60S ribosomal protein L35

Gene

Rpl35

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

Component of the large ribosomal subunit.By similarity

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-RNO-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-RNO-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-RNO-6791226. Major pathway of rRNA processing in the nucleolus and cytosol.
R-RNO-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-RNO-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-RNO-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L35
Gene namesi
Name:Rpl35
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 3

Organism-specific databases

RGDi1303007. Rpl35.

Subcellular locationi

GO - Cellular componenti

  • cytosolic large ribosomal subunit Source: RGD

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemovedBy similarity
ChainiPRO_00001305352 – 12360S ribosomal protein L35Add BLAST122

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei19N6-acetyllysineBy similarity1
Modified residuei29PhosphoserineBy similarity1
Modified residuei43N6-acetyllysineBy similarity1

Keywords - PTMi

Acetylation, Phosphoprotein

Proteomic databases

PaxDbiP17078.
PRIDEiP17078.

PTM databases

iPTMnetiP17078.
PhosphoSitePlusiP17078.

Expressioni

Gene expression databases

BgeeiENSRNOG00000014272.
GenevisibleiP17078. RN.

Interactioni

Subunit structurei

Component of the large ribosomal subunit.By similarity

Protein-protein interaction databases

MINTiMINT-4563981.
STRINGi10116.ENSRNOP00000019162.

Structurei

3D structure databases

ProteinModelPortaliP17078.
SMRiP17078.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG3436. Eukaryota.
COG0255. LUCA.
GeneTreeiENSGT00390000016384.
HOGENOMiHOG000207749.
HOVERGENiHBG000862.
InParanoidiP17078.
KOiK02918.
OMAiTVINAKQ.
OrthoDBiEOG091G1422.
PhylomeDBiP17078.
TreeFamiTF314951.

Family and domain databases

CDDicd00427. Ribosomal_L29_HIP. 1 hit.
HAMAPiMF_00374. Ribosomal_L29. 1 hit.
InterProiView protein in InterPro
IPR001854. Ribosomal_L29/L35.
IPR018254. Ribosomal_L29_CS.
PfamiView protein in Pfam
PF00831. Ribosomal_L29. 1 hit.
SUPFAMiSSF46561. SSF46561. 1 hit.
TIGRFAMsiTIGR00012. L29. 1 hit.
PROSITEiView protein in PROSITE
PS00579. RIBOSOMAL_L29. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P17078-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKIKARDLR GKKKEELLKQ LDDLKVELSQ LRVAKVTGGA ASKLSKIRVV
60 70 80 90 100
RKSIARVLTV INQTQKENLR KFYKGKKYKP LDLRPKKTRA MRRRLTKHEE
110 120
KLKTKKQQRK ERLYPLRKYA VKA
Length:123
Mass (Da):14,553
Last modified:January 23, 2007 - v3
Checksum:i67B76951361674EB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X51705 mRNA. Translation: CAA36001.1.
BC058499 mRNA. Translation: AAH58499.1.
PIRiA34571. R5RT35.
RefSeqiNP_997676.1. NM_212511.2.
UniGeneiRn.3458.

Genome annotation databases

EnsembliENSRNOT00000019162; ENSRNOP00000019162; ENSRNOG00000014272.
GeneIDi296709.
KEGGirno:296709.
UCSCiRGD:1303007. rat.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiRL35_RAT
AccessioniPrimary (citable) accession number: P17078
Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 1, 1990
Last sequence update: January 23, 2007
Last modified: June 7, 2017
This is version 112 of the entry and version 3 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families