Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

60S ribosomal protein L35

Gene

Rpl35

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

Component of the large ribosomal subunit.By similarity

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-RNO-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-RNO-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-RNO-6791226. Major pathway of rRNA processing in the nucleolus and cytosol.
R-RNO-72689. Formation of a pool of free 40S subunits.
R-RNO-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-RNO-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-RNO-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L35
Gene namesi
Name:Rpl35
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 3

Organism-specific databases

RGDi1303007. Rpl35.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001305351 – 12360S ribosomal protein L35Add BLAST123

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei19N6-acetyllysineBy similarity1
Cross-linki25Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)By similarity
Modified residuei29PhosphoserineBy similarity1
Modified residuei43N6-acetyllysineBy similarity1

Keywords - PTMi

Acetylation, Isopeptide bond, Phosphoprotein, Ubl conjugation

Proteomic databases

PaxDbiP17078.
PRIDEiP17078.

PTM databases

iPTMnetiP17078.
PhosphoSitePlusiP17078.

Expressioni

Gene expression databases

BgeeiENSRNOG00000014272.
GenevisibleiP17078. RN.

Interactioni

Subunit structurei

Component of the large ribosomal subunit.By similarity

Protein-protein interaction databases

MINTiMINT-4563981.
STRINGi10116.ENSRNOP00000019162.

Structurei

3D structure databases

ProteinModelPortaliP17078.
SMRiP17078.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG3436. Eukaryota.
COG0255. LUCA.
GeneTreeiENSGT00390000016384.
HOGENOMiHOG000207749.
HOVERGENiHBG000862.
InParanoidiP17078.
KOiK02918.
OMAiTVINAKQ.
OrthoDBiEOG091G1422.
PhylomeDBiP17078.
TreeFamiTF314951.

Family and domain databases

HAMAPiMF_00374. Ribosomal_L29. 1 hit.
InterProiView protein in InterPro
IPR001854. Ribosomal_L29/L35.
IPR018254. Ribosomal_L29_CS.
PfamiView protein in Pfam
PF00831. Ribosomal_L29. 1 hit.
SUPFAMiSSF46561. SSF46561. 1 hit.
TIGRFAMsiTIGR00012. L29. 1 hit.
PROSITEiView protein in PROSITE
PS00579. RIBOSOMAL_L29. 1 hit.

Sequencei

Sequence statusi: Complete.

P17078-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKIKARDLR GKKKEELLKQ LDDLKVELSQ LRVAKVTGGA ASKLSKIRVV
60 70 80 90 100
RKSIARVLTV INQTQKENLR KFYKGKKYKP LDLRPKKTRA MRRRLTKHEE
110 120
KLKTKKQQRK ERLYPLRKYA VKA
Length:123
Mass (Da):14,553
Last modified:January 23, 2007 - v3
Checksum:i67B76951361674EB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X51705 mRNA. Translation: CAA36001.1.
BC058499 mRNA. Translation: AAH58499.1.
PIRiA34571. R5RT35.
RefSeqiNP_997676.1. NM_212511.2.
UniGeneiRn.3458.

Genome annotation databases

EnsembliENSRNOT00000019162; ENSRNOP00000019162; ENSRNOG00000014272.
GeneIDi296709.
KEGGirno:296709.
UCSCiRGD:1303007. rat.

Similar proteinsi

Entry informationi

Entry nameiRL35_RAT
AccessioniPrimary (citable) accession number: P17078
Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 1, 1990
Last sequence update: January 23, 2007
Last modified: September 27, 2017
This is version 114 of the entry and version 3 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families