P17077 (RL9_RAT) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
60S ribosomal protein L9

Gene names

Name:

Rpl9

Organism

Rattus norvegicus (Rat) [Reference proteome]

Taxonomic identifier

10116 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length	192 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L6P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
PTM	Acetylation
Technical term	Complete proteome Direct protein sequencing Reference proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: InterPro
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	rRNA binding Inferred from electronic annotation. Source: InterPro structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 192	192	60S ribosomal protein L9		PRO_0000131100
Amino acid modifications
	Modified residue	121	1	N6-acetyllysine By similarity

Sequences

	Sequence		Length	Mass (Da)
	P17077 [UniParc]. Last modified August 1, 1990. Version 1. Checksum: 024F3ABA12F77D30	FASTA	192	21,893
	10 20 30 40 50 60 MKTILSNQTV DIPENVDITL KGRTVIVKGP RGTLRRDFNH INVELSLLGK KKKRLRVDKW 70 80 90 100 110 120 WGNRKELATV RTICSHVQNM IKGVTLGFRY KMRSVYAHFP INVVIQENGS LVEIRNFLGE 130 140 150 160 170 180 KYIRRVRMRT GVACSVSQAQ KDELILEGND IELVSNSAAL IQQATTVKNK DIRKFLDGIY 190 VSEKGTVQQP DE

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The primary structure of rat ribosomal protein L9." Suzuki K., Olvera J., Wool I.G. Gene 93:297-300(1990) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA], PROTEIN SEQUENCE OF 1-45. Strain: Sprague-Dawley. Tissue: Liver.
[2]	"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Ovary.

Cross-references

Sequence databases
EMBL GenBank DDBJ	X51706 mRNA. Translation: CAA36002.1. BC086561 mRNA. Translation: AAH86561.1.
IPI	IPI00515778.
PIR	R5RT9. JH0222.
RefSeq	NP_001007599.3. NM_001007598.3. XP_002725578.1. XM_002725532.2. XP_002729193.1. XM_002729147.2. XP_003748822.1. XM_003748774.1. XP_003753735.1. XM_003753687.1.
UniGene	Rn.107914. Rn.201359.
3D structure databases
ProteinModelPortal	P17077.
SMR	P17077. Positions 1-184.
ModBase	Search...
Protein-protein interaction databases
IntAct	P17077. 2 interactions.
STRING	10116.ENSRNOP00000032635.
PTM databases
PhosphoSite	P17077.
Proteomic databases
PaxDb	P17077.
PRIDE	P17077.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSRNOT00000038927; ENSRNOP00000032635; ENSRNOG00000026716. ENSRNOT00000042201; ENSRNOP00000041817; ENSRNOG00000030476.
GeneID	100360449. 100364457. 29257.
KEGG	rno:100360449. rno:100364457. rno:29257.
UCSC	RGD:62049. rat.
Organism-specific databases
CTD	6133.
RGD	62049. Rpl9.
Phylogenomic databases
eggNOG	COG0097.
GeneTree	ENSGT00390000015224.
HOGENOM	HOG000039905.
HOVERGEN	HBG000942.
InParanoid	P17077.
KO	K02940.
OMA	AVRTVCS.
OrthoDB	EOG4T4CWJ.
Gene expression databases
Genevestigator	P17077.
GermOnline	ENSRNOG00000026716. Rattus norvegicus. ENSRNOG00000030476. Rattus norvegicus.
Family and domain databases
Gene3D	3.90.930.12. 2 hits.
InterPro	IPR000702. Ribosomal_L6. IPR020040. Ribosomal_L6_a/b-dom. IPR002359. Ribosomal_L6_CS2. [Graphical view]
PANTHER	PTHR11655. PTHR11655. 1 hit.
Pfam	PF00347. Ribosomal_L6. 2 hits. [Graphical view]
PIRSF	PIRSF002162. Ribosomal_L6. 1 hit.
SUPFAM	SSF56053. Ribosomal_L6. 2 hits.
PROSITE	PS00700. RIBOSOMAL_L6_2. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	608568.

Entry information

Entry name

RL9_RAT

Accession

Primary (citable) accession number: P17077

Entry history

Integrated into UniProtKB/Swiss-Prot:	August 1, 1990
Last sequence update:	August 1, 1990
Last modified:	April 3, 2013
This is version 100 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Chordata Protein Annotation Program