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P17031

- ZNF26_HUMAN

UniProt

P17031 - ZNF26_HUMAN

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Protein

Zinc finger protein 26

Gene
ZNF26, KOX20
Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 3 out of 5 - Experimental evidence at transcript leveli

Functioni

May be involved in transcriptional regulation.

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri174 – 19623C2H2-type 1Add
BLAST
Zinc fingeri202 – 22423C2H2-type 2Add
BLAST
Zinc fingeri230 – 25223C2H2-type 3Add
BLAST
Zinc fingeri258 – 28023C2H2-type 4Add
BLAST
Zinc fingeri286 – 30823C2H2-type 5Add
BLAST
Zinc fingeri314 – 33623C2H2-type 6Add
BLAST
Zinc fingeri342 – 36423C2H2-type 7Add
BLAST
Zinc fingeri370 – 39223C2H2-type 8Add
BLAST
Zinc fingeri398 – 42023C2H2-type 9Add
BLAST
Zinc fingeri426 – 44823C2H2-type 10Add
BLAST
Zinc fingeri454 – 47623C2H2-type 11Add
BLAST
Zinc fingeri482 – 50423C2H2-type 12Add
BLAST
Zinc fingeri510 – 53223C2H2-type 13Add
BLAST

GO - Molecular functioni

  1. DNA binding Source: UniProtKB-KW
  2. metal ion binding Source: UniProtKB-KW
  3. sequence-specific DNA binding transcription factor activity Source: RefGenome

GO - Biological processi

  1. regulation of transcription, DNA-templated Source: RefGenome
  2. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding, Metal-binding, Zinc

Enzyme and pathway databases

ReactomeiREACT_12627. Generic Transcription Pathway.

Names & Taxonomyi

Protein namesi
Recommended name:
Zinc finger protein 26
Alternative name(s):
Zinc finger protein KOX20
Gene namesi
Name:ZNF26
Synonyms:KOX20
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 12

Organism-specific databases

HGNCiHGNC:13053. ZNF26.

Subcellular locationi

Nucleus Reviewed prediction

GO - Cellular componenti

  1. nucleus Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Nucleus

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA37631.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 533533Zinc finger protein 26PRO_0000047355Add
BLAST

Proteomic databases

PaxDbiP17031.
PRIDEiP17031.

PTM databases

PhosphoSiteiP17031.

Expressioni

Gene expression databases

ArrayExpressiP17031.
BgeeiP17031.
CleanExiHS_ZNF26.
GenevestigatoriP17031.

Organism-specific databases

HPAiHPA018329.

Interactioni

Protein-protein interaction databases

IntActiP17031. 1 interaction.

Structurei

3D structure databases

ProteinModelPortaliP17031.
SMRiP17031. Positions 14-56, 105-532.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini14 – 8572KRABAdd
BLAST

Sequence similaritiesi

Contains 13 C2H2-type zinc fingers.
Contains 1 KRAB domain.

Keywords - Domaini

Repeat, Zinc-finger

Phylogenomic databases

eggNOGiCOG5048.
HOGENOMiHOG000234617.
HOVERGENiHBG018163.
InParanoidiP17031.
KOiK09228.
OMAiFCERAFC.
PhylomeDBiP17031.
TreeFamiTF340593.

Family and domain databases

Gene3Di3.30.160.60. 13 hits.
InterProiIPR001909. Krueppel-associated_box.
IPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
PfamiPF01352. KRAB. 1 hit.
[Graphical view]
SMARTiSM00349. KRAB. 1 hit.
SM00355. ZnF_C2H2. 13 hits.
[Graphical view]
SUPFAMiSSF109640. SSF109640. 1 hit.
PROSITEiPS50805. KRAB. 1 hit.
PS00028. ZINC_FINGER_C2H2_1. 13 hits.
PS50157. ZINC_FINGER_C2H2_2. 13 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P17031-1 [UniParc]FASTAAdd to Basket

« Hide

MATSFRTASC WGLLSFKDIS MEFTWDEWQL LDSTQKYLYR DVILENYHNL    50
ISVGYHGTKP DLIFKLEQGE DPWIINAKIS RQSCPDGWEE WYQNNQDELE 100
SIERSYACSV LGRLNLSKTH DSSRQRLYNT RGKSLTQNSA PSRSYLRKNP 150
DKFHGYEEPY FLKHQRAHSI EKNCVCSECG KAFRCKSQLI VHLRIHTGER 200
PYECSKCERA FSAKSNLNAH QRVHTGEKPY SCSECEKVFS FRSQLIVHQE 250
IHTGGKPYGC SECGKAYSWK SQLLLHQRSH TGVKPYECSE CGKAFSLKSP 300
FVVHQRTHTG VKPHKCSECG KAFRSKSYLL VHIRMHTGEK PYQCSDCGKA 350
FNMKTQLIVH QGVHTGNNPY QCGECGKAFG RKEQLTAHLR AHAGEKPYGC 400
SECGKAFSSK SYLVIHRRTH TGERPYECSL CERAFCGKSQ LIIHQRTHST 450
EKPYECNECE KAYPRKASLQ IHQKTHSGEK PFKCSECGKA FTQKSSLSEH 500
QRVHTGEKPW KCSECGKSFC WNSGLRIHRK THK 533
Length:533
Mass (Da):61,282
Last modified:November 25, 2008 - v3
Checksum:iE7D64DFBE10D0282
GO

Sequence cautioni

The sequence AAH08211.1 differs from that shown. Reason: Erroneous initiation.
The sequence BAA91367.1 differs from that shown. Reason: Erroneous initiation.

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC073911 Genomic DNA. No translation available.
CH471218 Genomic DNA. Translation: EAW54803.1.
BC008211 mRNA. Translation: AAH08211.1. Different initiation.
BC046206 mRNA. Translation: AAH46206.1.
AK000762 mRNA. Translation: BAA91367.1. Different initiation.
BT006963 mRNA. Translation: AAP35609.1.
X52351 mRNA. Translation: CAA36577.1.
CCDSiCCDS31939.1.
PIRiI37960.
RefSeqiNP_062537.2. NM_019591.3.
UniGeneiHs.489608.

Genome annotation databases

EnsembliENST00000328654; ENSP00000333725; ENSG00000198393.
GeneIDi7574.
KEGGihsa:7574.
UCSCiuc001ull.2. human.

Polymorphism databases

DMDMi215274195.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC073911 Genomic DNA. No translation available.
CH471218 Genomic DNA. Translation: EAW54803.1 .
BC008211 mRNA. Translation: AAH08211.1 . Different initiation.
BC046206 mRNA. Translation: AAH46206.1 .
AK000762 mRNA. Translation: BAA91367.1 . Different initiation.
BT006963 mRNA. Translation: AAP35609.1 .
X52351 mRNA. Translation: CAA36577.1 .
CCDSi CCDS31939.1.
PIRi I37960.
RefSeqi NP_062537.2. NM_019591.3.
UniGenei Hs.489608.

3D structure databases

ProteinModelPortali P17031.
SMRi P17031. Positions 14-56, 105-532.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

IntActi P17031. 1 interaction.

PTM databases

PhosphoSitei P17031.

Polymorphism databases

DMDMi 215274195.

Proteomic databases

PaxDbi P17031.
PRIDEi P17031.

Protocols and materials databases

DNASUi 7574.
Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000328654 ; ENSP00000333725 ; ENSG00000198393 .
GeneIDi 7574.
KEGGi hsa:7574.
UCSCi uc001ull.2. human.

Organism-specific databases

CTDi 7574.
GeneCardsi GC12P133563.
HGNCi HGNC:13053. ZNF26.
HPAi HPA018329.
MIMi 194537. gene.
neXtProti NX_P17031.
PharmGKBi PA37631.
GenAtlasi Search...

Phylogenomic databases

eggNOGi COG5048.
HOGENOMi HOG000234617.
HOVERGENi HBG018163.
InParanoidi P17031.
KOi K09228.
OMAi FCERAFC.
PhylomeDBi P17031.
TreeFami TF340593.

Enzyme and pathway databases

Reactomei REACT_12627. Generic Transcription Pathway.

Miscellaneous databases

ChiTaRSi ZNF26. human.
GenomeRNAii 7574.
NextBioi 20777266.
PROi P17031.
SOURCEi Search...

Gene expression databases

ArrayExpressi P17031.
Bgeei P17031.
CleanExi HS_ZNF26.
Genevestigatori P17031.

Family and domain databases

Gene3Di 3.30.160.60. 13 hits.
InterProi IPR001909. Krueppel-associated_box.
IPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view ]
Pfami PF01352. KRAB. 1 hit.
[Graphical view ]
SMARTi SM00349. KRAB. 1 hit.
SM00355. ZnF_C2H2. 13 hits.
[Graphical view ]
SUPFAMi SSF109640. SSF109640. 1 hit.
PROSITEi PS50805. KRAB. 1 hit.
PS00028. ZINC_FINGER_C2H2_1. 13 hits.
PS50157. ZINC_FINGER_C2H2_2. 13 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The finished DNA sequence of human chromosome 12."
    Scherer S.E., Muzny D.M., Buhay C.J., Chen R., Cree A., Ding Y., Dugan-Rocha S., Gill R., Gunaratne P., Harris R.A., Hawes A.C., Hernandez J., Hodgson A.V., Hume J., Jackson A., Khan Z.M., Kovar-Smith C., Lewis L.R.
    , Lozado R.J., Metzker M.L., Milosavljevic A., Miner G.R., Montgomery K.T., Morgan M.B., Nazareth L.V., Scott G., Sodergren E., Song X.-Z., Steffen D., Lovering R.C., Wheeler D.A., Worley K.C., Yuan Y., Zhang Z., Adams C.Q., Ansari-Lari M.A., Ayele M., Brown M.J., Chen G., Chen Z., Clerc-Blankenburg K.P., Davis C., Delgado O., Dinh H.H., Draper H., Gonzalez-Garay M.L., Havlak P., Jackson L.R., Jacob L.S., Kelly S.H., Li L., Li Z., Liu J., Liu W., Lu J., Maheshwari M., Nguyen B.-V., Okwuonu G.O., Pasternak S., Perez L.M., Plopper F.J.H., Santibanez J., Shen H., Tabor P.E., Verduzco D., Waldron L., Wang Q., Williams G.A., Zhang J., Zhou J., Allen C.C., Amin A.G., Anyalebechi V., Bailey M., Barbaria J.A., Bimage K.E., Bryant N.P., Burch P.E., Burkett C.E., Burrell K.L., Calderon E., Cardenas V., Carter K., Casias K., Cavazos I., Cavazos S.R., Ceasar H., Chacko J., Chan S.N., Chavez D., Christopoulos C., Chu J., Cockrell R., Cox C.D., Dang M., Dathorne S.R., David R., Davis C.M., Davy-Carroll L., Deshazo D.R., Donlin J.E., D'Souza L., Eaves K.A., Egan A., Emery-Cohen A.J., Escotto M., Flagg N., Forbes L.D., Gabisi A.M., Garza M., Hamilton C., Henderson N., Hernandez O., Hines S., Hogues M.E., Huang M., Idlebird D.G., Johnson R., Jolivet A., Jones S., Kagan R., King L.M., Leal B., Lebow H., Lee S., LeVan J.M., Lewis L.C., London P., Lorensuhewa L.M., Loulseged H., Lovett D.A., Lucier A., Lucier R.L., Ma J., Madu R.C., Mapua P., Martindale A.D., Martinez E., Massey E., Mawhiney S., Meador M.G., Mendez S., Mercado C., Mercado I.C., Merritt C.E., Miner Z.L., Minja E., Mitchell T., Mohabbat F., Mohabbat K., Montgomery B., Moore N., Morris S., Munidasa M., Ngo R.N., Nguyen N.B., Nickerson E., Nwaokelemeh O.O., Nwokenkwo S., Obregon M., Oguh M., Oragunye N., Oviedo R.J., Parish B.J., Parker D.N., Parrish J., Parks K.L., Paul H.A., Payton B.A., Perez A., Perrin W., Pickens A., Primus E.L., Pu L.-L., Puazo M., Quiles M.M., Quiroz J.B., Rabata D., Reeves K., Ruiz S.J., Shao H., Sisson I., Sonaike T., Sorelle R.P., Sutton A.E., Svatek A.F., Svetz L.A., Tamerisa K.S., Taylor T.R., Teague B., Thomas N., Thorn R.D., Trejos Z.Y., Trevino B.K., Ukegbu O.N., Urban J.B., Vasquez L.I., Vera V.A., Villasana D.M., Wang L., Ward-Moore S., Warren J.T., Wei X., White F., Williamson A.L., Wleczyk R., Wooden H.S., Wooden S.H., Yen J., Yoon L., Yoon V., Zorrilla S.E., Nelson D., Kucherlapati R., Weinstock G., Gibbs R.A.
    Nature 440:346-351(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Placenta and Uterus.
  4. "Complete sequencing and characterization of 21,243 full-length human cDNAs."
    Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.
    , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
    Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 103-533.
  5. "Cloning of human full-length CDSs in BD Creator(TM) system donor vector."
    Kalnine N., Chen X., Rolfs A., Halleck A., Hines L., Eisenstein S., Koundinya M., Raphael J., Moreira D., Kelley T., LaBaer J., Lin Y., Phelan M., Farmer A.
    Submitted (MAY-2003) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 335-533.
  6. "Multiple genes encoding zinc finger domains are expressed in human T cells."
    Thiesen H.-J.
    New Biol. 2:363-374(1990) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 454-509.
    Tissue: Lymphoid tissue.

Entry informationi

Entry nameiZNF26_HUMAN
AccessioniPrimary (citable) accession number: P17031
Secondary accession number(s): Q86X57, Q9NWL3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 1, 1990
Last sequence update: November 25, 2008
Last modified: September 3, 2014
This is version 144 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 12
    Human chromosome 12: entries, gene names and cross-references to MIM
  2. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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