P16858 (G3P_MOUSE) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 29, 2013.
Version 139.
History...
Names·Attributes·General annotation·Ontologies·Interactions·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Interactions·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Glyceraldehyde-3-phosphate dehydrogenase Short name=GAPDH EC=1.2.1.12 | ||||
| Gene names |
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| Organism | Mus musculus (Mouse) [Reference proteome] | ||||
| Taxonomic identifier | 10090 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus![]() |
Protein attributes
| Sequence length | 333 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Has both glyceraldehyde-3-phosphate dehydrogenase and nitrosylase activities, thereby playing a role in glycolysis and nuclear functions, respectively. Glyceraldehyde-3-phosphate dehydrogenase is a key enzyme in glycolysis that catalyzes the first step of the pathway by converting D-glyceraldehyde 3-phosphate (G3P) into 3-phospho-D-glyceroyl phosphate. Modulates the organization and assembly of the cytoskeleton. Facilitates the CHP1-dependent microtubule and membrane associations through its ability to stimulate the binding of CHP1 to microtubules. Also participates in nuclear events including transcription, RNA transport, DNA replication and apoptosis. Nuclear functions are probably due to the nitrosylase activity that mediates cysteine S-nitrosylation of nuclear target proteins such as SIRT1, HDAC2 and PRKDC. Component of the GAIT (gamma interferon-activated inhibitor of translation) complex which mediates interferon-gamma-induced transcript-selective translation inhibition in inflammation processes. Upon interferon-gamma treatment assembles into the GAIT complex which binds to stem loop-containing GAIT elements in the 3'-UTR of diverse inflammatory mRNAs (such as ceruplasmin) and suppresses their translation. Ref.11 |
| Catalytic activity | D-glyceraldehyde 3-phosphate + phosphate + NAD+ = 3-phospho-D-glyceroyl phosphate + NADH. Ref.10 |
| Pathway | Carbohydrate degradation; glycolysis; pyruvate from D-glyceraldehyde 3-phosphate: step 1/5. |
| Subunit structure | Homotetramer. Interacts with EIF1AD, USP25, PRKCI and WARS. Interacts with TPPP; the interaction is direct. Interacts (when S-nitrosylated) with SIAH1; leading to nuclear translocation. Interacts with RILPL1/GOSPEL, leading to prevent the interaction between GAPDH and SIAH1 and prevent nuclear translocation. Interacts with CHP1; the interaction increases the binding of CHP1 with microtubules. Associates with microtubules By similarity. Component of the GAIT complex. Ref.11 |
| Subcellular location | Cytoplasm › cytosol By similarity. Nucleus By similarity. Cytoplasm › cytoskeleton By similarity. Note: Translocates to the nucleus following S-nitrosylation and interaction with SIAH1, which contains a nuclear localization signal By similarity. |
| Post-translational modification | ISGylated By similarity. S-nitrosylation of Cys-150 leads to interaction with SIAH1, followed by translocation to the nucleus By similarity. Sulfhydration at Cys-150 increases catalytic activity. |
| Sequence similarities | Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. |
Ontologies
Binary interactions
With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| Kcnma1 | Q08460 | 3 | EBI-444871,EBI-1633915 |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Initiator methionine | 1 | 1 | Removed By similarity | ||||||
| Chain | 2 – 333 | 332 | Glyceraldehyde-3-phosphate dehydrogenase | PRO_0000145490 | |||||
Regions | |||||||||
| Nucleotide binding | 11 – 12 | 2 | NAD By similarity | ||||||
| Region | 2 – 146 | 145 | Interaction with WARS By similarity | ||||||
| Region | 149 – 151 | 3 | Glyceraldehyde 3-phosphate binding By similarity | ||||||
| Region | 209 – 210 | 2 | Glyceraldehyde 3-phosphate binding By similarity | ||||||
Sites | |||||||||
| Active site | 150 | 1 | Nucleophile By similarity | ||||||
| Binding site | 33 | 1 | NAD By similarity | ||||||
| Binding site | 78 | 1 | NAD; via carbonyl oxygen By similarity | ||||||
| Binding site | 120 | 1 | NAD By similarity | ||||||
| Binding site | 180 | 1 | Glyceraldehyde 3-phosphate By similarity | ||||||
| Binding site | 232 | 1 | Glyceraldehyde 3-phosphate By similarity | ||||||
| Binding site | 314 | 1 | NAD By similarity | ||||||
| Site | 177 | 1 | Activates thiol group during catalysis By similarity | ||||||
Amino acid modifications | |||||||||
| Modified residue | 3 | 1 | N6,N6-dimethyllysine By similarity | ||||||
| Modified residue | 7 | 1 | Deamidated asparagine By similarity | ||||||
| Modified residue | 40 | 1 | Phosphotyrosine By similarity | ||||||
| Modified residue | 59 | 1 | N6-acetyllysine By similarity | ||||||
| Modified residue | 62 | 1 | Deamidated asparagine By similarity | ||||||
| Modified residue | 64 | 1 | N6,N6-dimethyllysine By similarity | ||||||
| Modified residue | 68 | 1 | Deamidated asparagine By similarity | ||||||
| Modified residue | 73 | 1 | Phosphothreonine By similarity | ||||||
| Modified residue | 120 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 146 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 147 | 1 | Deamidated asparagine By similarity | ||||||
| Modified residue | 149 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 150 | 1 | ADP-ribosylcysteine; by autocatalysis; in irreversibly inhibited form By similarity | ||||||
| Modified residue | 150 | 1 | Cysteine persulfide Ref.10 | ||||||
| Modified residue | 150 | 1 | S-nitrosocysteine; in reversibly inhibited form By similarity | ||||||
| Modified residue | 153 | 1 | Deamidated asparagine By similarity | ||||||
| Modified residue | 182 | 1 | Phosphothreonine By similarity | ||||||
| Modified residue | 192 | 1 | N6,N6-dimethyllysine; alternate By similarity | ||||||
| Modified residue | 192 | 1 | N6-acetyllysine By similarity | ||||||
| Modified residue | 192 | 1 | N6-malonyllysine; alternate By similarity | ||||||
| Modified residue | 209 | 1 | Phosphothreonine Ref.9 | ||||||
| Modified residue | 213 | 1 | N6,N6-dimethyllysine; alternate By similarity | ||||||
| Modified residue | 213 | 1 | N6-malonyllysine; alternate By similarity | ||||||
| Modified residue | 217 | 1 | N6-acetyllysine By similarity | ||||||
| Modified residue | 223 | 1 | Deamidated asparagine By similarity | ||||||
| Modified residue | 225 | 1 | N6,N6-dimethyllysine; alternate By similarity | ||||||
| Modified residue | 225 | 1 | N6-acetyllysine; alternate By similarity | ||||||
| Modified residue | 227 | 1 | Phosphothreonine By similarity | ||||||
| Modified residue | 235 | 1 | Phosphothreonine By similarity | ||||||
| Modified residue | 252 | 1 | N6-acetyllysine By similarity | ||||||
| Modified residue | 258 | 1 | N6,N6-dimethyllysine By similarity | ||||||
| Modified residue | 261 | 1 | N6,N6-dimethyllysine By similarity | ||||||
| Modified residue | 310 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 312 | 1 | Phosphotyrosine Ref.8 | ||||||
| Modified residue | 314 | 1 | Deamidated asparagine By similarity | ||||||
| Modified residue | 316 | 1 | Phosphotyrosine Ref.7 Ref.8 | ||||||
| Modified residue | 318 | 1 | Phosphotyrosine Ref.7 Ref.8 | ||||||
| Modified residue | 328 | 1 | Phosphotyrosine Ref.8 | ||||||
| Modified residue | 332 | 1 | N6,N6-dimethyllysine By similarity | ||||||
Experimental info | |||||||||
| Mutagenesis | 150 | 1 | C → S: Abolishes sulfhydration and induces impaired enzyme activity. Ref.10 | ||||||
| Sequence conflict | 3 | 1 | K → E in BAE40174. Ref.2 | ||||||
| Sequence conflict | 30 | 1 | A → V in AAH92267. Ref.4 | ||||||
| Sequence conflict | 82 | 1 | N → S in BAE35989. Ref.2 | ||||||
| Sequence conflict | 84 | 1 | K → E in BAE40174. Ref.2 | ||||||
| Sequence conflict | 89 | 1 | G → S in BAE26016. Ref.2 | ||||||
| Sequence conflict | 91 | 1 | E → K in BAE35989. Ref.2 | ||||||
| Sequence conflict | 134 | 1 | N → D in AAH85315. Ref.4 | ||||||
| Sequence conflict | 195 | 1 | R → C in AAH85315. Ref.4 | ||||||
| Sequence conflict | 300 | 1 | A → S in AAH85315. Ref.4 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Glyceraldehyde-3-phosphate dehydrogenase mRNA is a major interleukin 2-induced transcript in a cloned T-helper lymphocyte." Sabath D.E., Broome H.E., Prystowsky M.B. Gene 91:185-191(1990) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA]. |
| [2] | "The transcriptional landscape of the mammalian genome." Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J. Hayashizaki Y.Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: BALB/c, C57BL/6J and DBA/2. Tissue: Cerebellum, Eye, Head, Kidney and Lung. |
| [3] | "Lineage-specific biology revealed by a finished genome assembly of the mouse." Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., She X., Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W., Kapustin Y., Meric P., Maglott D., Birtle Z., Marques A.C., Graves T., Zhou S. Ponting C.P.PLoS Biol. 7:E1000112-E1000112(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: C57BL/6J. |
| [4] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: 129, C57BL/6, C57BL/6J, Czech II, FVB/N and FVB/N-3. Tissue: Brain, Colon, Embryo, Eye, Mammary gland and Mammary tumor. |
| [5] | Lubec G., Kang S.U., Klug S., Yang J.W., Zigmond M., Sunyer B., Chen W.-Q. Submitted (JAN-2009) to UniProtKB Cited for: PROTEIN SEQUENCE OF 4-11; 27-50; 65-78; 85-105; 116-137; 144-189; 199-213; 218-246 AND 262-333, MASS SPECTROMETRY. Strain: C57BL/6 and OF1. Tissue: Brain and Hippocampus. |
| [6] | "Housekeeping genes for phylogenetic analysis of eutherian relationships." Kullberg M., Nilsson M.A., Arnason U., Harley E.H., Janke A. Mol. Biol. Evol. 23:1493-1503(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 24-249. |
| [7] | "Quantitative time-resolved phosphoproteomic analysis of mast cell signaling." Cao L., Yu K., Banh C., Nguyen V., Ritz A., Raphael B.J., Kawakami Y., Kawakami T., Salomon A.R. J. Immunol. 179:5864-5876(2007) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT TYR-316 AND TYR-318, MASS SPECTROMETRY. Tissue: Mast cell. |
| [8] | "Large-scale identification and evolution indexing of tyrosine phosphorylation sites from murine brain." Ballif B.A., Carey G.R., Sunyaev S.R., Gygi S.P. J. Proteome Res. 7:311-318(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT TYR-312; TYR-316; TYR-318 AND TYR-328, MASS SPECTROMETRY. Tissue: Brain. |
| [9] | "Large-scale phosphorylation analysis of mouse liver." Villen J., Beausoleil S.A., Gerber S.A., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 104:1488-1493(2007) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-209, MASS SPECTROMETRY. Tissue: Liver. |
| [10] | "H2S signals through protein S-sulfhydration." Mustafa A.K., Gadalla M.M., Sen N., Kim S., Mu W., Gazi S.K., Barrow R.K., Yang G., Wang R., Snyder S.H. Sci. Signal. 2:RA72-RA72(2009) [PubMed] [Europe PMC] [Abstract] Cited for: CATALYTIC ACTIVITY, SULFHYDRATION AT CYS-150, MUTAGENESIS OF CYS-150. |
| [11] | "Heterotrimeric GAIT complex drives transcript-selective translation inhibition in murine macrophages." Arif A., Chatterjee P., Moodt R.A., Fox P.L. Mol. Cell. Biol. 32:5046-5055(2012) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, SUBUNIT, RECONSTITUTION OF THE GAIT COMPLEX. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | M32599 mRNA. Translation: AAA37659.1. AK002273 mRNA. Translation: BAB21979.1. AK081405 mRNA. Translation: BAC38211.1. AK140794 mRNA. Translation: BAE24481.1. AK144690 mRNA. Translation: BAE26016.1. AK146435 mRNA. Translation: BAE27169.1. AK147738 mRNA. Translation: BAE28105.1. AK147891 mRNA. Translation: BAE28208.1. AK160399 mRNA. Translation: BAE35768.1. AK160753 mRNA. Translation: BAE35989.1. AK164415 mRNA. Translation: BAE37778.1. AK168217 mRNA. Translation: BAE40174.1. AL662926 Genomic DNA. Translation: CAI25599.1. BC082592 mRNA. Translation: AAH82592.1. BC083065 mRNA. Translation: AAH83065.1. BC083079 mRNA. Translation: AAH83079.1. BC083080 mRNA. Translation: AAH83080.1. BC083149 mRNA. Translation: AAH83149.1. BC085274 mRNA. Translation: AAH85274.1. BC085275 mRNA. Translation: AAH85275.1. BC085315 mRNA. Translation: AAH85315.1. BC091768 mRNA. Translation: AAH91768.1. BC092252 mRNA. Translation: AAH92252.1. BC092264 mRNA. Translation: AAH92264.1. BC092267 mRNA. Translation: AAH92267.1. BC092294 mRNA. Translation: AAH92294.1. BC093508 mRNA. Translation: AAH93508.1. BC094037 mRNA. Translation: AAH94037.1. BC095932 mRNA. Translation: AAH95932.1. BC096440 mRNA. Translation: AAH96440.1. BC096590 mRNA. Translation: AAH96590.1. BC110311 mRNA. Translation: AAI10312.1. BC145810 mRNA. Translation: AAI45811.1. BC145812 mRNA. Translation: AAI45813.1. DQ403054 mRNA. Translation: ABD77187.1. |
| IPI | IPI00273646. |
| PIR | DEMSG. JT0553. |
| RefSeq | NP_032110.1. NM_008084.2. XP_001476757.1. XM_001476707.3. |
| UniGene | Mm.304088. Mm.309092. Mm.317779. Mm.343110. Mm.392463. Mm.458138. Mm.458416. |
3D structure databases | |
| ProteinModelPortal | P16858. |
| SMR | P16858. Positions 2-333. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | P16858. 8 interactions. |
| MINT | MINT-1869564. |
PTM databases | |
| PhosphoSite | P16858. |
2D gel databases | |
| REPRODUCTION-2DPAGE | P16858. Q5U410. |
| SWISS-2DPAGE | P16858. |
Proteomic databases | |
| PaxDb | P16858. |
| PRIDE | P16858. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENSMUST00000117757; ENSMUSP00000113942; ENSMUSG00000057666. ENSMUST00000118875; ENSMUSP00000113213; ENSMUSG00000057666. |
| GeneID | 100042025. 14433. |
| KEGG | mmu:100042025. mmu:14433. |
| UCSC | uc007igj.1. mouse. |
Organism-specific databases | |
| CTD | 2597. |
| MGI | MGI:95640. Gapdh. |
Phylogenomic databases | |
| eggNOG | COG0057. |
| GeneTree | ENSGT00690000101860. |
| HOVERGEN | HBG000227. |
| InParanoid | A6H6A8. |
| KO | K00134. |
| OMA | ASENEYK. |
| OrthoDB | EOG4Q84XS. |
Enzyme and pathway databases | |
| SABIO-RK | P16858. |
| UniPathway | UPA00109; UER00184. |
Gene expression databases | |
| ArrayExpress | P16858. |
| Bgee | P16858. |
| CleanEx | MM_GAPDH. |
| Genevestigator | P16858. |
| GermOnline | ENSMUSG00000057666. Mus musculus. |
Family and domain databases | |
| Gene3D | 3.40.50.720. 1 hit. |
| InterPro | IPR020831. GlycerAld/Erythrose_P_DH. IPR020830. GlycerAld_3-P_DH_AS. IPR020829. GlycerAld_3-P_DH_cat. IPR020828. GlycerAld_3-P_DH_NAD(P)-bd. IPR006424. Glyceraldehyde-3-P_DH_1. IPR016040. NAD(P)-bd_dom. [Graphical view] |
| PANTHER | PTHR10836. PTHR10836. 1 hit. |
| Pfam | PF02800. Gp_dh_C. 1 hit. PF00044. Gp_dh_N. 1 hit. [Graphical view] |
| PIRSF | PIRSF000149. GAP_DH. 1 hit. |
| PRINTS | PR00078. G3PDHDRGNASE. |
| SMART | SM00846. Gp_dh_N. 1 hit. [Graphical view] |
| TIGRFAMs | TIGR01534. GAPDH-I. 1 hit. |
| PROSITE | PS00071. GAPDH. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| NextBio | 286057. |
| SOURCE | Search... |
Entry information
| Entry name | G3P_MOUSE | ||||||||
| Accession | Primary (citable) accession number: P16858 Secondary accession number(s): A6H6A8 Q5U410 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
Relevant documents
| MGD cross-references Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot |
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

Clusters with
