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P16735

- PORTL_HCMVA

UniProt

P16735 - PORTL_HCMVA

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Protein
Portal protein UL6 homolog
Gene
UL104
Organism
Human cytomegalovirus (strain AD169) (HHV-5) (Human herpesvirus 5)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Forms a portal in the viral capsid through which viral DNA is translocated during DNA packaging. Assembles as a dodecamer at a single fivefold axe of the T=16 icosahedric capsid. Binds to the molecular motor that translocate the viral DNA, termed terminase By similarity.

GO - Biological processi

  1. DNA packaging Source: InterPro
  2. viral release from host cell Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Viral genome packaging, Virus exit from host cell

Names & Taxonomyi

Protein namesi
Recommended name:
Portal protein UL6 homolog
Gene namesi
Name:UL104
OrganismiHuman cytomegalovirus (strain AD169) (HHV-5) (Human herpesvirus 5)
Taxonomic identifieri10360 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stageHerpesviralesHerpesviridaeBetaherpesvirinaeCytomegalovirus
Virus hostiHomo sapiens (Human) [TaxID: 9606]
ProteomesiUP000008991: Genome, UP000008992: Genome

Subcellular locationi

Virion. Host nucleus By similarity

GO - Cellular componenti

  1. host cell nucleus Source: UniProtKB-SubCell
  2. virion Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Host nucleus, Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 697697Portal protein UL6 homolog
PRO_0000115913Add
BLAST

Interactioni

Subunit structurei

Homododecamerizes. Interacts with putative terminase subunit UL89 and UL56 By similarity.

Structurei

3D structure databases

ProteinModelPortaliP16735.

Family & Domainsi

Sequence similaritiesi

Family and domain databases

InterProiIPR002660. Herpes_UL6.
[Graphical view]
PfamiPF01763. Herpes_UL6. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P16735-1 [UniParc]FASTAAdd to Basket

« Hide

MERNHWNEKS SGAKRSRERD LTLSTIRSIL AADERLRIKA SSYLGVGRGV    50
DDEAVIDIFP TGQTMSFLRL LHGFLGTCRG QSMHQVLRDP CVLRKQLLYG 100
VCKTLFDTIT VRRVAEEWKL HAALFPYRAL DEEDLEQYLL VWSASLRQSV 150
QTGVLGALRD ILYQYADNDD YGLYVDWCVT VGLVPLLDVK TKPSEAAERA 200
QFVRAAVQRA TETHPLAQDL LQANLALLLQ VAERLGAVRV ANAPEVRVFK 250
KVRSERLEAQ LRGKHIRLYV AAEPLAYERD KLLFTTPVAH LHEEILRYDG 300
LCRHQKICQL LNTFPVKVVT ASRHELNCKK LVEMMEQHDR GSDAKKSIMK 350
FLLNVSDSKS RIGIEDSVES FLQDLTPSLV DQNRLLPARG PGGPGVVGPG 400
GAVVGGPAGH VGLLPPPPGP AAPERDIRDL FKKQVIKCLE EQIQSQVDEI 450
QDLRTLNQTW ENRVRELRDL LTRYASRRED SMSLGARDAE LYHLPVLEAV 500
RKARDAAPFR PLAVEDNRLV ANSFFSQFVP GTESLERFLT QLWENEYFRT 550
FRLRRLVTHQ GAEEAIVYSN YTVERVTLPY LCHILALGTL DPVPEAYLQL 600
SFGEIVAAAY DDSKFCRYVE LICSREKARR RQMSREAAGG VPERGTASSG 650
GPGTLERSAP RRLITADEER RGPERVGRFR NGGPDDPRRA GGPYGFH 697
Length:697
Mass (Da):78,521
Last modified:December 16, 2008 - v2
Checksum:i4A86400FDC16AAFA
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X17403 Genomic DNA. Translation: CAA35341.1.
BK000394 Genomic DNA. Translation: DAA00099.2.
PIRiS09870. QQBEK3.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X17403 Genomic DNA. Translation: CAA35341.1 .
BK000394 Genomic DNA. Translation: DAA00099.2 .
PIRi S09870. QQBEK3.

3D structure databases

ProteinModelPortali P16735.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Family and domain databases

InterProi IPR002660. Herpes_UL6.
[Graphical view ]
Pfami PF01763. Herpes_UL6. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Analysis of the protein-coding content of the sequence of human cytomegalovirus strain AD169."
    Chee M.S., Bankier A.T., Beck S., Bohni R., Brown C.M., Cerny R., Horsnell T., Hutchison C.A. III, Kouzarides T., Martignetti J.A., Preddie E., Satchwell S.C., Tomlinson P., Weston K.M., Barrell B.G.
    Curr. Top. Microbiol. Immunol. 154:125-169(1990) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. "The human cytomegalovirus genome revisited: comparison with the chimpanzee cytomegalovirus genome."
    Davison A.J., Dolan A., Akter P., Addison C., Dargan D.J., Alcendor D.J., McGeoch D.J., Hayward G.S.
    J. Gen. Virol. 84:17-28(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
  3. Cited for: IDENTIFICATION.
  4. Davison A.J.
    Submitted (SEP-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: SEQUENCE REVISION TO 157.

Entry informationi

Entry nameiPORTL_HCMVA
AccessioniPrimary (citable) accession number: P16735
Secondary accession number(s): Q7M6T5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 1, 1990
Last sequence update: December 16, 2008
Last modified: June 11, 2014
This is version 57 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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