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Protein

Protein PhnB

Gene

phnB

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG10712-MONOMER.
ECOL316407:JW4068-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Protein PhnB
Gene namesi
Name:phnB
Synonyms:yjdN
Ordered Locus Names:b4107, JW4068
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG10712. yjdN.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 147147Protein PhnBPRO_0000058390Add
BLAST

Proteomic databases

EPDiP16681.
PaxDbiP16681.
PRIDEiP16681.

Interactioni

Protein-protein interaction databases

BioGridi4263089. 5 interactions.
IntActiP16681. 1 interaction.
STRINGi511145.b4107.

Structurei

3D structure databases

ProteinModelPortaliP16681.
SMRiP16681. Positions 1-139.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4108SQ4. Bacteria.
COG2764. LUCA.
HOGENOMiHOG000232027.
InParanoidiP16681.
KOiK04750.
OMAiWAARFGM.
OrthoDBiEOG69SKCC.
PhylomeDBiP16681.

Family and domain databases

Gene3Di3.10.180.10. 1 hit.
InterProiIPR029068. Glyas_Bleomycin-R_OHBP_Dase.
IPR028973. PhnB-like.
[Graphical view]
PfamiPF06983. 3-dmu-9_3-mt. 1 hit.
[Graphical view]
SUPFAMiSSF54593. SSF54593. 1 hit.

Sequencei

Sequence statusi: Complete.

P16681-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPLSPYLSFA GNCSDAIAYY QRTLGAELLY KISFGEMPKS AQDSAENCPS
60 70 80 90 100
GMQFPDTAIA HANVRIAGSD IMMSDAMPSG KASYSGFTLV LDSQQVEEGK
110 120 130 140
RWFDNLAANG KIEMAWQETF WAHGFGKVTD KFGVPWMINV VKQQPTQ
Length:147
Mass (Da):16,171
Last modified:August 1, 1990 - v1
Checksum:i6B1C11B5F24BBD66
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
J05260 Genomic DNA. Translation: AAA24338.1.
U14003 Genomic DNA. Translation: AAA97006.1.
U00096 Genomic DNA. Translation: AAC77068.1.
AP009048 Genomic DNA. Translation: BAE78109.1.
PIRiC35718.
RefSeqiNP_418531.1. NC_000913.3.
WP_001131339.1. NZ_CP010444.1.

Genome annotation databases

EnsemblBacteriaiAAC77068; AAC77068; b4107.
BAE78109; BAE78109; BAE78109.
GeneIDi948622.
KEGGiecj:JW4068.
eco:b4107.
PATRICi32123773. VBIEscCol129921_4235.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
J05260 Genomic DNA. Translation: AAA24338.1.
U14003 Genomic DNA. Translation: AAA97006.1.
U00096 Genomic DNA. Translation: AAC77068.1.
AP009048 Genomic DNA. Translation: BAE78109.1.
PIRiC35718.
RefSeqiNP_418531.1. NC_000913.3.
WP_001131339.1. NZ_CP010444.1.

3D structure databases

ProteinModelPortaliP16681.
SMRiP16681. Positions 1-139.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4263089. 5 interactions.
IntActiP16681. 1 interaction.
STRINGi511145.b4107.

Proteomic databases

EPDiP16681.
PaxDbiP16681.
PRIDEiP16681.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC77068; AAC77068; b4107.
BAE78109; BAE78109; BAE78109.
GeneIDi948622.
KEGGiecj:JW4068.
eco:b4107.
PATRICi32123773. VBIEscCol129921_4235.

Organism-specific databases

EchoBASEiEB0706.
EcoGeneiEG10712. yjdN.

Phylogenomic databases

eggNOGiENOG4108SQ4. Bacteria.
COG2764. LUCA.
HOGENOMiHOG000232027.
InParanoidiP16681.
KOiK04750.
OMAiWAARFGM.
OrthoDBiEOG69SKCC.
PhylomeDBiP16681.

Enzyme and pathway databases

BioCyciEcoCyc:EG10712-MONOMER.
ECOL316407:JW4068-MONOMER.

Miscellaneous databases

PROiP16681.

Family and domain databases

Gene3Di3.10.180.10. 1 hit.
InterProiIPR029068. Glyas_Bleomycin-R_OHBP_Dase.
IPR028973. PhnB-like.
[Graphical view]
PfamiPF06983. 3-dmu-9_3-mt. 1 hit.
[Graphical view]
SUPFAMiSSF54593. SSF54593. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Molecular biology of carbon-phosphorus bond cleavage. Cloning and sequencing of the phn (psiD) genes involved in alkylphosphonate uptake and C-P lyase activity in Escherichia coli B."
    Chen C.-M., Ye Q.-Z., Zhu Z., Wanner B.L., Walsh C.T.
    J. Biol. Chem. 265:4461-4471(1990) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: B.
  2. "Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes."
    Burland V.D., Plunkett G. III, Sofia H.J., Daniels D.L., Blattner F.R.
    Nucleic Acids Res. 23:2105-2119(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  4. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiPHNB_ECOLI
AccessioniPrimary (citable) accession number: P16681
Secondary accession number(s): Q2M6J7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 1, 1990
Last sequence update: August 1, 1990
Last modified: July 6, 2016
This is version 103 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.