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P16620

- PTP69_DROME

UniProt

P16620 - PTP69_DROME

Protein

Tyrosine-protein phosphatase 69D

Gene

Ptp69D

Organism
Drosophila melanogaster (Fruit fly)
Status
Reviewed - Annotation score: 5 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 145 (01 Oct 2014)
      Sequence version 2 (30 Aug 2005)
      Previous versions | rss
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    Functioni

    Possible cell adhesion receptor.

    Catalytic activityi

    Protein tyrosine phosphate + H2O = protein tyrosine + phosphate.1 PublicationPROSITE-ProRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei1097 – 10971Phosphocysteine intermediateBy similarity
    Active sitei1391 – 13911Phosphocysteine intermediateBy similarity

    GO - Molecular functioni

    1. protein tyrosine phosphatase activity Source: FlyBase
    2. transmembrane receptor protein tyrosine phosphatase activity Source: FlyBase

    GO - Biological processi

    1. axonal defasciculation Source: FlyBase
    2. axon guidance Source: FlyBase
    3. axonogenesis Source: FlyBase
    4. cell adhesion Source: UniProtKB-KW
    5. defasciculation of motor neuron axon Source: FlyBase
    6. dendrite morphogenesis Source: FlyBase
    7. lateral inhibition Source: FlyBase
    8. motor neuron axon guidance Source: FlyBase
    9. peptidyl-tyrosine dephosphorylation Source: GOC
    10. protein dephosphorylation Source: FlyBase

    Keywords - Molecular functioni

    Hydrolase, Protein phosphatase, Receptor

    Keywords - Biological processi

    Cell adhesion

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Tyrosine-protein phosphatase 69D (EC:3.1.3.48)
    Alternative name(s):
    Protein-tyrosine-phosphate phosphohydrolase
    Short name:
    DPTP
    Gene namesi
    Name:Ptp69D
    Synonyms:DPTP
    ORF Names:CG10975
    OrganismiDrosophila melanogaster (Fruit fly)
    Taxonomic identifieri7227 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora
    ProteomesiUP000000803: Chromosome 3L

    Organism-specific databases

    FlyBaseiFBgn0014007. Ptp69D.

    Subcellular locationi

    GO - Cellular componenti

    1. axon Source: FlyBase
    2. integral component of membrane Source: UniProtKB-KW
    3. plasma membrane Source: FlyBase

    Keywords - Cellular componenti

    Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2828Sequence AnalysisAdd
    BLAST
    Chaini29 – 14621434Tyrosine-protein phosphatase 69DPRO_0000025428Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Glycosylationi40 – 401N-linked (GlcNAc...)Sequence Analysis
    Disulfide bondi45 ↔ 112PROSITE-ProRule annotation
    Glycosylationi58 – 581N-linked (GlcNAc...)1 Publication
    Glycosylationi64 – 641N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi85 – 851N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi109 – 1091N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi119 – 1191N-linked (GlcNAc...)Sequence Analysis
    Disulfide bondi154 ↔ 214PROSITE-ProRule annotation
    Glycosylationi162 – 1621N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi191 – 1911N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi196 – 1961N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi209 – 2091N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi255 – 2551N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi288 – 2881N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi302 – 3021N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi429 – 4291N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi442 – 4421N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi451 – 4511N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi516 – 5161N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi613 – 6131N-linked (GlcNAc...)1 Publication
    Glycosylationi701 – 7011N-linked (GlcNAc...)1 Publication
    Glycosylationi755 – 7551N-linked (GlcNAc...)Sequence Analysis

    Keywords - PTMi

    Disulfide bond, Glycoprotein

    Proteomic databases

    PaxDbiP16620.
    PRIDEiP16620.

    Expressioni

    Gene expression databases

    BgeeiP16620.

    Interactioni

    Protein-protein interaction databases

    BioGridi64791. 6 interactions.
    IntActiP16620. 3 interactions.
    MINTiMINT-5227360.

    Structurei

    3D structure databases

    ProteinModelPortaliP16620.
    SMRiP16620. Positions 853-1447.
    ModBaseiSearch...
    MobiDBiSearch...

    Topological domain

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Topological domaini29 – 805777ExtracellularSequence AnalysisAdd
    BLAST
    Topological domaini824 – 1462639CytoplasmicSequence AnalysisAdd
    BLAST

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei806 – 82318HelicalSequence AnalysisAdd
    BLAST

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini29 – 12597Ig-like C2-type 1Add
    BLAST
    Domaini131 – 230100Ig-like C2-type 2Add
    BLAST
    Domaini237 – 33296Fibronectin type-III 1PROSITE-ProRule annotationAdd
    BLAST
    Domaini334 – 435102Fibronectin type-III 2PROSITE-ProRule annotationAdd
    BLAST
    Domaini439 – 547109Fibronectin type-III 3PROSITE-ProRule annotationAdd
    BLAST
    Domaini893 – 1156264Tyrosine-protein phosphatase 1PROSITE-ProRule annotationAdd
    BLAST
    Domaini1187 – 1450264Tyrosine-protein phosphatase 2PROSITE-ProRule annotationAdd
    BLAST

    Sequence similaritiesi

    Contains 3 fibronectin type-III domains.PROSITE-ProRule annotation
    Contains 2 tyrosine-protein phosphatase domains.PROSITE-ProRule annotation

    Keywords - Domaini

    Immunoglobulin domain, Repeat, Signal, Transmembrane, Transmembrane helix

    Phylogenomic databases

    eggNOGiCOG5599.
    GeneTreeiENSGT00680000099951.
    InParanoidiP16620.
    KOiK01104.
    OMAiYNGWPTV.
    OrthoDBiEOG7034G2.
    PhylomeDBiP16620.

    Family and domain databases

    Gene3Di2.60.40.10. 5 hits.
    3.90.190.10. 2 hits.
    InterProiIPR003961. Fibronectin_type3.
    IPR007110. Ig-like_dom.
    IPR013783. Ig-like_fold.
    IPR003599. Ig_sub.
    IPR003598. Ig_sub2.
    IPR029021. Prot-tyrosine_phosphatase-like.
    IPR000387. Tyr/Dual-sp_Pase.
    IPR016130. Tyr_Pase_AS.
    IPR000242. Tyr_Pase_rcpt/non-rcpt.
    [Graphical view]
    PfamiPF00041. fn3. 3 hits.
    PF00102. Y_phosphatase. 2 hits.
    [Graphical view]
    PRINTSiPR00700. PRTYPHPHTASE.
    SMARTiSM00060. FN3. 3 hits.
    SM00409. IG. 1 hit.
    SM00408. IGc2. 1 hit.
    SM00194. PTPc. 2 hits.
    [Graphical view]
    SUPFAMiSSF49265. SSF49265. 2 hits.
    SSF52799. SSF52799. 2 hits.
    PROSITEiPS50853. FN3. 3 hits.
    PS50835. IG_LIKE. 2 hits.
    PS00383. TYR_PHOSPHATASE_1. 2 hits.
    PS50056. TYR_PHOSPHATASE_2. 2 hits.
    PS50055. TYR_PHOSPHATASE_PTP. 2 hits.
    [Graphical view]

    Sequences (2)i

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    This entry describes 2 isoformsi produced by alternative splicing. Align

    Isoform A (identifier: P16620-1) [UniParc]FASTAAdd to Basket

    This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

    « Hide

    MALLYRRMSM LLNIILAYIF LCAICVQGSV KQEWAEIGKN VSLECASENE     50
    AVAWKLGNQT INKNHTRYKI RTEPLKSNDD GSENNDSQDF IKYKNVLALL 100
    DVNIKDSGNY TCTAQTGQNH STEFQVRPYL PSKVLQSTPD RIKRKIKQDV 150
    MLYCLIEMYP QNETTNRNLK WLKDGSQFEF LDTFSSISKL NDTHLNFTLE 200
    FTEVYKKENG TYKCTVFDDT GLEITSKEIT LFVMEVPQVS IDFAKAVGAN 250
    KIYLNWTVND GNDPIQKFFI TLQEAGTPTF TYHKDFINGS HTSYILDHFK 300
    PNTTYFLRIV GKNSIGNGQP TQYPQGITTL SYDPIFIPKV ETTGSTASTI 350
    TIGWNPPPPD LIDYIQYYEL IVSESGEVPK VIEEAIYQQN SRNLPYMFDK 400
    LKTATDYEFR VRACSDLTKT CGPWSENVNG TTMDGVATKP TNLSIQCHHD 450
    NVTRGNSIAI NWDVPKTPNG KVVSYLIHLL GNPMSTVDRE MWGPKIRRID 500
    EPHHKTLYES VSPNTNYTVT VSAITRHKKN GEPATGSCLM PVSTPDAIGR 550
    TMWSKVNLDS KYVLKLYLPK ISERNGPICC YRLYLVRINN DNKELPDPEK 600
    LNIATYQEVH SDNVTRSSAY IAEMISSKYF RPEIFLGDEK RFSENNDIIR 650
    DNDEICRKCL EGTPFLRKPE IIHIPPQGSL SNSDSELPIL SEKDNLIKGA 700
    NLTEHALKIL ESKLRDKRNA VTSDENPILS AVNPNVPLHD SSRDVFDGEI 750
    DINSNYTGFL EIIVRDRNNA LMAYSKYFDI ITPATEAEPI QSLNNMDYYL 800
    SIGVKAGAVL LGVILVFIVL WVFHHKKTKN ELQGEDTLTL RDSLSRALFG 850
    RRNHNHSHFI TSGNHKGFDA GPIHRLDLEN AYKNRHKDTD YGFLREYEML 900
    PNRFSDRTTK NSDLKENACK NRYPDIKAYD QTRVKLAVIN GLQTTDYINA 950
    NFVIGYKERK KFICAQGPME STIDDFWRMI WEQHLEIIVM LTNLEEYNKA 1000
    KCAKYWPEKV FDTKQFGDIL VKFAQERKTG DYIERTLNVS KNKANVGEEE 1050
    DRRQITQYHY LTWKDFMAPE HPHGIIKFIR QINSVYSLQR GPILVHCSAG 1100
    VGRTGTLVAL DSLIQQLEEE DSVSIYNTVC DLRHQRNFLV QSLKQYIFLY 1150
    RALLDTGTFG NTDICIDTMA SAIESLKRKP NEGKCKLEVE FEKLLATADE 1200
    ISKSCSVGEN EENNMKNRSQ EIIPYDRNRV ILTPLPMREN STYINASFIE 1250
    GYDNSETFII AQDPLENTIG DFWRMISEQS VTTLVMISEI GDGPRKCPRY 1300
    WADDEVQYDH ILVKYVHSES CPYYTRREFY VTNCKIDDTL KVTQFQYNGW 1350
    PTVDGEVPEV CRGIIELVDQ AYNHYKNNKN SGCRSPLTVH CSLGTDRSSI 1400
    FVAMCILVQH LRLEKCVDIC ATTRKLRSQR TGLINSYAQY EFLHRAIINY 1450
    SDLHHIAEST LD 1462
    Length:1,462
    Mass (Da):167,460
    Last modified:August 30, 2005 - v2
    Checksum:i61214ADC778D319A
    GO
    Isoform B (identifier: P16620-2) [UniParc]FASTAAdd to Basket

    The sequence of this isoform differs from the canonical sequence as follows:
         845-845: Missing.

    Note: No experimental confirmation available.

    Show »
    Length:1,461
    Mass (Da):167,373
    Checksum:i6E5B21C7402C65DD
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti91 – 911I → M in AAA28842. (PubMed:2554325)Curated
    Sequence conflicti98 – 981A → T in AAA28842. (PubMed:2554325)Curated
    Sequence conflicti105 – 1051K → N in AAA28842. (PubMed:2554325)Curated
    Sequence conflicti127 – 1271R → K in AAA28842. (PubMed:2554325)Curated
    Sequence conflicti638 – 6381D → A in AAA28842. (PubMed:2554325)Curated
    Sequence conflicti651 – 6511D → G in AAA28842. (PubMed:2554325)Curated
    Sequence conflicti990 – 9901M → I in AAA28842. (PubMed:2554325)Curated
    Sequence conflicti1189 – 11891V → M in AAA28842. (PubMed:2554325)Curated
    Sequence conflicti1265 – 12651L → F in AAA28842. (PubMed:2554325)Curated

    Alternative sequence

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Alternative sequencei845 – 8451Missing in isoform B. 1 PublicationVSP_015257

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    M27699 mRNA. Translation: AAA28842.1.
    AE014296 Genomic DNA. Translation: AAF49892.2.
    AE014296 Genomic DNA. Translation: AAO41254.1.
    BT001531 mRNA. Translation: AAN71286.1.
    PIRiB36182.
    RefSeqiNP_524048.2. NM_079324.3. [P16620-1]
    NP_788502.1. NM_176324.2. [P16620-2]
    UniGeneiDm.945.

    Genome annotation databases

    EnsemblMetazoaiFBtr0075913; FBpp0075645; FBgn0014007. [P16620-1]
    GeneIDi39443.
    KEGGidme:Dmel_CG10975.

    Keywords - Coding sequence diversityi

    Alternative splicing

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    M27699 mRNA. Translation: AAA28842.1 .
    AE014296 Genomic DNA. Translation: AAF49892.2 .
    AE014296 Genomic DNA. Translation: AAO41254.1 .
    BT001531 mRNA. Translation: AAN71286.1 .
    PIRi B36182.
    RefSeqi NP_524048.2. NM_079324.3. [P16620-1 ]
    NP_788502.1. NM_176324.2. [P16620-2 ]
    UniGenei Dm.945.

    3D structure databases

    ProteinModelPortali P16620.
    SMRi P16620. Positions 853-1447.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 64791. 6 interactions.
    IntActi P16620. 3 interactions.
    MINTi MINT-5227360.

    Proteomic databases

    PaxDbi P16620.
    PRIDEi P16620.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblMetazoai FBtr0075913 ; FBpp0075645 ; FBgn0014007 . [P16620-1 ]
    GeneIDi 39443.
    KEGGi dme:Dmel_CG10975.

    Organism-specific databases

    CTDi 39443.
    FlyBasei FBgn0014007. Ptp69D.

    Phylogenomic databases

    eggNOGi COG5599.
    GeneTreei ENSGT00680000099951.
    InParanoidi P16620.
    KOi K01104.
    OMAi YNGWPTV.
    OrthoDBi EOG7034G2.
    PhylomeDBi P16620.

    Miscellaneous databases

    GenomeRNAii 39443.
    NextBioi 813657.

    Gene expression databases

    Bgeei P16620.

    Family and domain databases

    Gene3Di 2.60.40.10. 5 hits.
    3.90.190.10. 2 hits.
    InterProi IPR003961. Fibronectin_type3.
    IPR007110. Ig-like_dom.
    IPR013783. Ig-like_fold.
    IPR003599. Ig_sub.
    IPR003598. Ig_sub2.
    IPR029021. Prot-tyrosine_phosphatase-like.
    IPR000387. Tyr/Dual-sp_Pase.
    IPR016130. Tyr_Pase_AS.
    IPR000242. Tyr_Pase_rcpt/non-rcpt.
    [Graphical view ]
    Pfami PF00041. fn3. 3 hits.
    PF00102. Y_phosphatase. 2 hits.
    [Graphical view ]
    PRINTSi PR00700. PRTYPHPHTASE.
    SMARTi SM00060. FN3. 3 hits.
    SM00409. IG. 1 hit.
    SM00408. IGc2. 1 hit.
    SM00194. PTPc. 2 hits.
    [Graphical view ]
    SUPFAMi SSF49265. SSF49265. 2 hits.
    SSF52799. SSF52799. 2 hits.
    PROSITEi PS50853. FN3. 3 hits.
    PS50835. IG_LIKE. 2 hits.
    PS00383. TYR_PHOSPHATASE_1. 2 hits.
    PS50056. TYR_PHOSPHATASE_2. 2 hits.
    PS50055. TYR_PHOSPHATASE_PTP. 2 hits.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "A family of receptor-linked protein tyrosine phosphatases in humans and Drosophila."
      Streuli M., Krueger N.X., Tsai A.Y.M., Saito H.
      Proc. Natl. Acad. Sci. U.S.A. 86:8698-8702(1989) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM A), POSSIBLE FUNCTION, CATALYTIC ACTIVITY.
    2. "The genome sequence of Drosophila melanogaster."
      Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D.
      , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.-H.C., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Miklos G.L.G., Abril J.F., Agbayani A., An H.-J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D.A., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.-H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C.L., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J.H., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D.C., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.J., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.-Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., Woodage T., Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.-F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S.C., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
      Science 287:2185-2195(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Berkeley.
    3. Cited for: GENOME REANNOTATION, ALTERNATIVE SPLICING.
      Strain: Berkeley.
    4. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM B).
      Strain: Berkeley.
      Tissue: Embryo.
    5. "Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins."
      Wollscheid B., Bausch-Fluck D., Henderson C., O'Brien R., Bibel M., Schiess R., Aebersold R., Watts J.D.
      Nat. Biotechnol. 27:378-386(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: GLYCOSYLATION [LARGE SCALE ANALYSIS] AT ASN-58; ASN-613 AND ASN-701, IDENTIFICATION BY MASS SPECTROMETRY.

    Entry informationi

    Entry nameiPTP69_DROME
    AccessioniPrimary (citable) accession number: P16620
    Secondary accession number(s): Q8IGY3, Q9VU03
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: August 1, 1990
    Last sequence update: August 30, 2005
    Last modified: October 1, 2014
    This is version 145 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programDrosophila annotation project

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Drosophila
      Drosophila: entries, gene names and cross-references to FlyBase
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3