P16615 (AT2A2_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 161.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 Short name=SERCA2 Short name=SR Ca(2+)-ATPase 2 EC=3.6.3.8 Alternative name(s): Calcium pump 2 Calcium-transporting ATPase sarcoplasmic reticulum type, slow twitch skeletal muscle isoform Endoplasmic reticulum class 1/2 Ca(2+) ATPase | ||||
| Gene names |
| ||||
| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 1042 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to the sarcoplasmic reticulum lumen. Isoform 2 is involved in the regulation of the contraction/relaxation cycle. Ref.19 |
| Catalytic activity | ATP + H2O + Ca2+(Side 1) = ADP + phosphate + Ca2+(Side 2). |
| Enzyme regulation | Reversibly inhibited by phospholamban (PLN) at low calcium concentrations. Dephosphorylated PLN decreases the apparent affinity of the ATPase for calcium. This inhibition is regulated by the phosphorylation of PLN By similarity. |
| Subunit structure | Associated with phospholamban (PLN) By similarity. Isoform 1 interacts with TRAM2 (via C-terminus). Interacts with HAX1. Interacts with S100A8 and S100A9 By similarity. Ref.6 Ref.11 |
| Subcellular location | Endoplasmic reticulum membrane; Multi-pass membrane protein. Sarcoplasmic reticulum membrane; Multi-pass membrane protein. |
| Tissue specificity | Isoform 1 is widely expressed in smooth muscle and nonmuscle tissues such as in adult skin epidermis, with highest expression in liver, pancreas and lung, and intermediate expression in brain, kidney and placenta. Also expressed at lower levels in heart and skeletal muscle. Isoforms 2 and 3 are highly expressed in the heart and slow twitch skeletal muscle. Expression of isoform 3 is predominantly restricted to cardiomyocytes and in close proximity to the sarcolemma. Both isoforms are mildly expressed in lung, kidney, liver, pancreas and placenta. Expression of isoform 3 is amplified during monocytic differentiation and also observed in the fetal heart. Ref.5 Ref.15 Ref.19 |
| Post-translational modification | Nitrated under oxidative stress. Nitration on the two tyrosine residues inhibits catalytic activity. |
| Involvement in disease | Acrokeratosis verruciformis (AKV) [MIM:101900]: A localized disorder of keratinization, which is inherited as an autosomal dominant trait. Its onset is early in life with multiple flat-topped, flesh-colored papules on the hands and feet, punctate keratoses on the palms and soles, with varying degrees of nail involvement. The histopathology shows a distinctive pattern of epidermal features with hyperkeratosis, hypergranulosis and acanthosis together with papillomatosis. These changes are frequently associated with circumscribed elevations of the epidermis that are said to resemble church spires. There are no features of dyskeratosis or acantholysis, the typical findings in lesions of Darier disease. Darier disease (DD) [MIM:124200]: A skin disorder characterized by warty papules and plaques in seborrheic areas (central trunk, flexures, scalp and forehead), palmoplantar pits and distinctive nail abnormalities. It is due to loss of adhesion between epidermal cells (acantholysis) and abnormal keratinization. Patients with mild disease may have no more than a few scattered keratotic papules or subtle nail changes, whereas those with severe disease are handicapped by widespread malodorous keratotic plaques. Some patients present with hemorrhage into acantholytic vesicles on the palms and dorsal aspects of the fingers which gives rise to black macules. In a few families affected by Darier disease, neuropsychiatric abnormalities such as mild mental retardation, schizophrenia, bipolar disorder and epilepsy have been reported. Stress, UV exposure, heat, sweat, friction and oral contraception exacerbate disease symptoms. Clinical variants of Darier disease include hypertrophic, vesicobullous, hypopigmented, cornifying, zosteriform or linear, acute and comedonal subtypes. Comedonal Darier disease is characterized by the coexistence of acne-like comedonal lesions with typical Darier hyperkeratotic papules on light-exposed areas. At histopathologic level, comedonal Darier disease differs from classic Darier disease in the prominent follicular involvement and the presence of greatly elongated dermal villi. |
| Sequence similarities | Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIA subfamily. [View classification] |
| Sequence caution | The sequence BAG57266.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended. |
Ontologies
Alternative products
| This entry describes 5 isoforms produced by alternative splicing. [Align] [Select] Note: SERCA2 transcripts differ only in their 3'-UTR region and are expressed in a tissue-specific manner. | ||||||
| Isoform 1 (identifier: P16615-1) Also known as: SERCA2B; ATP2A2B; Class 2-4; HK1; This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Note: Ubiquitous housekeeping isoform. | ||||||
| Isoform 2 (identifier: P16615-2) Also known as: SERCA2A; ATP2A2A; Class 1; HK2; The sequence of this isoform differs from the canonical sequence as follows: 994-1042: GKECVQPATKSCSFSACTDGISWPFVLLIMPLVIWVYSTDTNFSDMFWS → AILE | ||||||
| Note: Cardiac/slow twitch, muscle specific isoform. Has a lower affinity for calcium and a higher catalytic turnover rate. | ||||||
| Isoform 3 (identifier: P16615-3) Also known as: SERCA2C; The sequence of this isoform differs from the canonical sequence as follows: 994-1042: GKECVQPATKSCSFSACTDGISWPFVLLIMPLVIWVYSTDTNFSDMFWS → VLSSEL | ||||||
| Note: May be due to intron retention. Shows a lower apparent affinity for cytosolic calcium than isoform 2 and a catalytic turnover rate similar to isoform 1. | ||||||
| Isoform 4 (identifier: P16615-4) The sequence of this isoform differs from the canonical sequence as follows: 155-181: Missing. | ||||||
| Note: No experimental confirmation available. | ||||||
| Isoform 5 (identifier: P16615-5) The sequence of this isoform differs from the canonical sequence as follows: 994-1042: GKECVQPATKSCSFSACTDGISWPFVLLIMPLVIWVYSTDTNFSDMFWS → DIIK | ||||||
| Note: No experimental confirmation available. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 1042 | 1042 | Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 | PRO_0000046196 | |||||
Regions | |||||||||
| Topological domain | 1 – 48 | 48 | Cytoplasmic By similarity | ||||||
| Transmembrane | 49 – 69 | 21 | Helical; Name=1; By similarity | ||||||
| Topological domain | 70 – 89 | 20 | Lumenal By similarity | ||||||
| Transmembrane | 90 – 110 | 21 | Helical; Name=2; By similarity | ||||||
| Topological domain | 111 – 253 | 143 | Cytoplasmic By similarity | ||||||
| Transmembrane | 254 – 273 | 20 | Helical; Name=3; By similarity | ||||||
| Topological domain | 274 – 295 | 22 | Lumenal By similarity | ||||||
| Transmembrane | 296 – 313 | 18 | Helical; Name=4; By similarity | ||||||
| Topological domain | 314 – 756 | 443 | Cytoplasmic By similarity | ||||||
| Transmembrane | 757 – 776 | 20 | Helical; Name=5; By similarity | ||||||
| Topological domain | 777 – 786 | 10 | Lumenal By similarity | ||||||
| Transmembrane | 787 – 807 | 21 | Helical; Name=6; By similarity | ||||||
| Topological domain | 808 – 827 | 20 | Cytoplasmic By similarity | ||||||
| Transmembrane | 828 – 850 | 23 | Helical; Name=7; By similarity | ||||||
| Topological domain | 851 – 896 | 46 | Lumenal By similarity | ||||||
| Transmembrane | 897 – 916 | 20 | Helical; Name=8; By similarity | ||||||
| Topological domain | 917 – 929 | 13 | Cytoplasmic By similarity | ||||||
| Transmembrane | 930 – 948 | 19 | Helical; Name=9; By similarity | ||||||
| Topological domain | 949 – 963 | 15 | Lumenal By similarity | ||||||
| Transmembrane | 964 – 984 | 21 | Helical; Name=10; By similarity | ||||||
| Topological domain | 985 – 1042 | 58 | Cytoplasmic By similarity | ||||||
| Region | 370 – 400 | 31 | Interacts with phospholamban 1 By similarity | ||||||
| Region | 575 – 594 | 20 | Interacts with HAX1 | ||||||
| Region | 787 – 807 | 21 | Interacts with phospholamban 2 By similarity | ||||||
Sites | |||||||||
| Active site | 351 | 1 | 4-aspartylphosphate intermediate By similarity | ||||||
| Metal binding | 304 | 1 | Calcium 2; via carbonyl oxygen By similarity | ||||||
| Metal binding | 305 | 1 | Calcium 2; via carbonyl oxygen By similarity | ||||||
| Metal binding | 307 | 1 | Calcium 2; via carbonyl oxygen By similarity | ||||||
| Metal binding | 309 | 1 | Calcium 2 By similarity | ||||||
| Metal binding | 702 | 1 | Magnesium By similarity | ||||||
| Metal binding | 706 | 1 | Magnesium By similarity | ||||||
| Metal binding | 767 | 1 | Calcium 1 By similarity | ||||||
| Metal binding | 770 | 1 | Calcium 1 By similarity | ||||||
| Metal binding | 795 | 1 | Calcium 2 By similarity | ||||||
| Metal binding | 798 | 1 | Calcium 1 By similarity | ||||||
| Metal binding | 799 | 1 | Calcium 1 By similarity | ||||||
| Metal binding | 799 | 1 | Calcium 2 By similarity | ||||||
| Metal binding | 907 | 1 | Calcium 1 By similarity | ||||||
Amino acid modifications | |||||||||
| Modified residue | 294 | 1 | Nitrated tyrosine Ref.7 | ||||||
| Modified residue | 295 | 1 | Nitrated tyrosine Ref.7 | ||||||
| Modified residue | 537 | 1 | Phosphothreonine By similarity | ||||||
| Modified residue | 663 | 1 | Phosphoserine Ref.8 Ref.9 Ref.12 | ||||||
| Cross-link | 143 | Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) By similarity | |||||||
Natural variations | |||||||||
| Alternative sequence | 155 – 181 | 27 | Missing in isoform 4. | VSP_039392 | |||||
| Alternative sequence | 994 – 1042 | 49 | GKECV…DMFWS → AILE in isoform 2. | VSP_000358 | |||||
| Alternative sequence | 994 – 1042 | 49 | GKECV…DMFWS → VLSSEL in isoform 3. | VSP_039393 | |||||
| Alternative sequence | 994 – 1042 | 49 | GKECV…DMFWS → DIIK in isoform 5. | VSP_039394 | |||||
| Natural variant | 23 | 1 | G → E in DD. Ref.17 Corresponds to variant rs28929478 [ dbSNP | Ensembl ]. | VAR_008608 | |||||
| Natural variant | 39 | 1 | N → T in DD. Ref.16 | VAR_008609 | |||||
| Natural variant | 41 | 1 | Missing in DD; comedonal type. Ref.20 | VAR_063398 | |||||
| Natural variant | 47 | 1 | K → KMFLTGK in DD. | VAR_008610 | |||||
| Natural variant | 65 | 1 | L → S in DD; severe form. | VAR_008611 | |||||
| Natural variant | 131 | 1 | R → Q in DD. | VAR_008612 | |||||
| Natural variant | 160 | 1 | P → L in DD. | VAR_008613 | |||||
| Natural variant | 186 | 1 | S → P in DD. | VAR_008614 | |||||
| Natural variant | 211 | 1 | G → D in DD; severe form. | VAR_008615 | |||||
| Natural variant | 223 | 1 | V → M in DD. | VAR_008616 | |||||
| Natural variant | 268 | 1 | C → F in DD; haemorrhagic lesions. | VAR_008617 | |||||
| Natural variant | 310 | 1 | G → V in DD. | VAR_008618 | |||||
| Natural variant | 318 | 1 | C → R in DD; severe form. | VAR_008619 | |||||
| Natural variant | 348 | 1 | I → T in DD. | VAR_008620 | |||||
| Natural variant | 357 | 1 | T → K in DD. Ref.17 | VAR_009508 | |||||
| Natural variant | 412 | 1 | E → G in DD. | VAR_008621 | |||||
| Natural variant | 495 | 1 | S → F in DD. Ref.17 | VAR_008622 | |||||
| Natural variant | 560 | 1 | C → R in DD; neuropsychiatric phenotype. Ref.16 | VAR_008623 | |||||
| Natural variant | 602 | 1 | P → L in AKV; loss of activity. Ref.18 | VAR_017532 | |||||
| Natural variant | 675 | 1 | F → S in DD; multiple neuropsychiatric features. | VAR_008624 | |||||
| Natural variant | 683 | 1 | K → E in DD; depression. | VAR_008625 | |||||
| Natural variant | 702 | 1 | D → N in DD; moderate form. | VAR_008626 | |||||
| Natural variant | 745 | 1 | A → D in DD; moderate form. | VAR_008627 | |||||
| Natural variant | 749 | 1 | G → R in DD. Ref.17 | VAR_009509 | |||||
| Natural variant | 754 | 1 | Missing in DD. | VAR_008628 | |||||
| Natural variant | 765 | 1 | S → L in DD. Ref.16 | VAR_008629 | |||||
| Natural variant | 767 | 1 | N → S in DD; haemorrhagic lesions and neuropsychiatric phenotype. | VAR_008630 | |||||
| Natural variant | 769 | 1 | G → R in DD. | VAR_008631 | |||||
| Natural variant | 803 | 1 | A → T in DD; mild/moderate form. | VAR_008632 | |||||
| Natural variant | 838 | 1 | A → P in DD; severe form; petit mal epilepsy. | VAR_008633 | |||||
| Natural variant | 843 | 1 | V → F in DD; depression. | VAR_008634 | |||||
| Natural variant | 875 | 1 | C → G in DD; retinitis pigmentosa. | VAR_008635 | |||||
| Natural variant | 920 | 1 | S → Y in DD; mild/moderate/severe form; one patient with epilepsy. | VAR_008636 | |||||
| Natural variant | 943 | 1 | H → R in DD; learning difficulties. | VAR_008637 | |||||
| Natural variant | 975 | 1 | P → R in DD. | VAR_008638 | |||||
Sequences
| ||||||||||||||||||||||||||||||||||||||||||
References
| « Hide 'large scale' references | |
| [1] | "Molecular cloning of cDNAs from human kidney coding for two alternatively spliced products of the cardiac Ca2+-ATPase gene." Lytton J., Maclennan D.H. J. Biol. Chem. 263:15024-15031(1988) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA] (ISOFORMS 1 AND 2). Tissue: Kidney. |
| [2] | "The finished DNA sequence of human chromosome 12." Scherer S.E., Muzny D.M., Buhay C.J., Chen R., Cree A., Ding Y., Dugan-Rocha S., Gill R., Gunaratne P., Harris R.A., Hawes A.C., Hernandez J., Hodgson A.V., Hume J., Jackson A., Khan Z.M., Kovar-Smith C., Lewis L.R. Gibbs R.A.Nature 440:346-351(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [3] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). Tissue: Eye. |
| [4] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 84-1042 (ISOFORM 4). Tissue: Cerebellum. |
| [5] | "Identification of a new SERCA2 splice variant regulated during monocytic differentiation." Gelebart P., Martin V., Enouf J., Papp B. Biochem. Biophys. Res. Commun. 303:676-684(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 954-1042 (ISOFORM 3), TISSUE SPECIFICITY. |
| [6] | "TRAM2 protein interacts with endoplasmic reticulum Ca2+ pump Serca2b and is necessary for collagen type I synthesis." Stefanovic B., Stefanovic L., Schnabl B., Bataller R., Brenner D.A. Mol. Cell. Biol. 24:1758-1768(2004) [PubMed] [Europe PMC] [Abstract] Cited for: INTERACTION WITH TRAM2. |
| [7] | "Detection of sequence-specific tyrosine nitration of manganese SOD and SERCA in cardiovascular disease and aging." Xu S., Ying J., Jiang B., Guo W., Adachi T., Sharov V., Lazar H., Menzoian J., Knyushko T.V., Bigelow D., Schoeneich C., Cohen R.A. Am. J. Physiol. 290:H2220-H2227(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NITRATION AT TYR-294 AND TYR-295. |
| [8] | "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks." Olsen J.V., Blagoev B., Gnad F., Macek B., Kumar C., Mortensen P., Mann M. Cell 127:635-648(2006) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-663, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [9] | "Kinase-selective enrichment enables quantitative phosphoproteomics of the kinome across the cell cycle." Daub H., Olsen J.V., Bairlein M., Gnad F., Oppermann F.S., Korner R., Greff Z., Keri G., Stemmann O., Mann M. Mol. Cell 31:438-448(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-663, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [10] | "A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. Tissue: Cervix carcinoma. |
| [11] | "The anti-apoptotic protein HAX-1 interacts with SERCA2 and regulates its protein levels to promote cell survival." Vafiadaki E., Arvanitis D.A., Pagakis S.N., Papalouka V., Sanoudou D., Kontrogianni-Konstantopoulos A., Kranias E.G. Mol. Biol. Cell 20:306-318(2009) [PubMed] [Europe PMC] [Abstract] Cited for: INTERACTION WITH HAX1. |
| [12] | "Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions." Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K., Rodionov V., Han D.K. Sci. Signal. 2:RA46-RA46(2009) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-663, MASS SPECTROMETRY. Tissue: Leukemic T-cell. |
| [13] | "Initial characterization of the human central proteome." Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J. BMC Syst. Biol. 5:17-17(2011) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. |
| [14] | "Spectrum of novel ATP2A2 mutations in patients with Darier's disease." Sakuntabhai A., Burge S., Monk S., Hovnanian A. Hum. Mol. Genet. 8:1611-1619(1999) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS DD. |
| [15] | "ATP2A2 mutations in Darier's disease: variant cutaneous phenotypes are associated with missense mutations, but neuropsychiatric features are independent of mutation class." Ruiz-Perez V.L., Carter S.A., Healy E., Todd C., Rees J.L., Steijlen P.M., Carmichael A.J., Lewis H.M., Hohl D., Itin P., Vahlquist A., Gobello T., Mazzanti C., Reggazini R., Nagy G., Munro C.S., Strachan T. Hum. Mol. Genet. 8:1621-1630(1999) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS DD, TISSUE SPECIFICITY. |
| [16] | "ATP2A2 mutations in Darier's disease and their relationship to neuropsychiatric phenotypes." Jacobsen N.J.O., Lyons I., Hoogendoorn B., Burge S., Kwok P.-Y., O'Donovan M.C., Craddock N., Owen M.J. Hum. Mol. Genet. 8:1631-1636(1999) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS DD THR-39; ARG-560 AND LEU-765. |
| [17] | "Mutations in ATP2A2, encoding a Ca2+ pump, cause Darier disease." Sakuntabhai A., Ruiz-Perez V., Carter S., Jacobsen N., Burge S., Monk S., Smith M., Munro C.S., O'Donovan M.C., Craddock N., Kucherlapati R., Rees J.L., Owen M.J., Lathrop G.M., Monaco A.P., Strachan T., Hovnanian A. Nat. Genet. 21:271-277(1999) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANTS DD GLU-23; LYS-357; PHE-495 AND ARG-749. |
| [18] | "Acrokeratosis verruciformis of Hopf is caused by mutation in ATP2A2: evidence that it is allelic to Darier's disease." Dhitavat J., Macfarlane S., Dode L., Leslie N., Sakuntabhai A., MacSween R., Saihan E., Hovnanian A. J. Invest. Dermatol. 120:229-232(2003) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANT AKV LEU-602. |
| [19] | "Ca2+-ATPases in non-failing and failing heart: evidence for a novel cardiac sarco/endoplasmic reticulum Ca2+-ATPase 2 isoform (SERCA2c)." Dally S., Bredoux R., Corvazier E., Andersen J.P., Clausen J.D., Dode L., Fanchaouy M., Gelebart P., Monceau V., Del Monte F., Gwathmey J.K., Hajjar R., Chaabane C., Bobe R., Raies A., Enouf J. Biochem. J. 395:249-258(2006) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, TISSUE SPECIFICITY. |
| [20] | "Three-base deletion mutation c.120_122delGTT in ATP2A2 leads to the unique phenotype of comedonal Darier disease." Tsuruta D., Akiyama M., Ishida-Yamamoto A., Imanishi H., Mizuno N., Sowa J., Kobayashi H., Ishii M., Kurokawa I., Shimizu H. Br. J. Dermatol. 162:687-689(2010) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANT DD LEU-41 DEL. |
| + | Additional computationally mapped references. |
Web resources
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | M23114 mRNA. Translation: AAA53193.1. M23116 Genomic DNA. Translation: AAA52757.1. M23115 mRNA. Translation: AAA53194.1. M23278, M23116 Genomic DNA. Translation: AAA52758.1. AC006088 Genomic DNA. No translation available. BC035588 mRNA. Translation: AAH35588.1. AK293877 mRNA. Translation: BAG57266.1. Different initiation. AY186578 mRNA. Translation: AAO47398.1. |
| IPI | IPI00177817. IPI00219078. IPI00747443. IPI00914019. IPI00969023. |
| PIR | A31981. B31981. |
| RefSeq | NP_001672.1. NM_001681.3. NP_733765.1. NM_170665.3. |
| UniGene | Hs.506759. |
3D structure databases | |
| ProteinModelPortal | P16615. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | P16615. 9 interactions. |
| MINT | MINT-4991144. |
| STRING | 9606.ENSP00000324892. |
Protein family/group databases | |
| TCDB | 3.A.3.2.7. P-type ATPase (P-ATPase) superfamily. |
PTM databases | |
| PhosphoSite | P16615. |
Polymorphism databases | |
| DMDM | 114312. |
Proteomic databases | |
| PaxDb | P16615. |
| PRIDE | P16615. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000308664; ENSP00000311186; ENSG00000174437. ENST00000395494; ENSP00000378872; ENSG00000174437. ENST00000539276; ENSP00000440045; ENSG00000174437. |
| GeneID | 488. |
| KEGG | hsa:488. |
| UCSC | uc001tqk.4. human. uc001tql.4. human. uc021rdt.1. human. |
Organism-specific databases | |
| CTD | 488. |
| GeneCards | GC12P110719. |
| HGNC | HGNC:812. ATP2A2. |
| MIM | 101900. phenotype. 108740. gene. 124200. phenotype. |
| neXtProt | NX_P16615. |
| Orphanet | 79151. Acrokeratosis verruciformis of Hopf. 218. Darier disease. |
| PharmGKB | PA71. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | COG0474. |
| HOGENOM | HOG000265621. |
| HOVERGEN | HBG105648. |
| InParanoid | P16615. |
| KO | K05853. |
| OMA | LPRCTHI. |
| PhylomeDB | P16615. |
Enzyme and pathway databases | |
| Reactome | REACT_15518. Transmembrane transport of small molecules. REACT_604. Hemostasis. |
Gene expression databases | |
| ArrayExpress | P16615. |
| Bgee | P16615. |
| CleanEx | HS_ATP2A2. |
| Genevestigator | P16615. |
| GermOnline | ENSG00000174437. Homo sapiens. |
Family and domain databases | |
| Gene3D | 1.20.1110.10. 2 hits. 2.70.150.10. 2 hits. 3.40.1110.10. 1 hit. |
| InterPro | IPR005782. ATPase_P-typ_Ca-transp_IIA. IPR006068. ATPase_P-typ_cation-transptr_C. IPR004014. ATPase_P-typ_cation-transptr_N. IPR023299. ATPase_P-typ_cyto_domN. IPR018303. ATPase_P-typ_P_site. IPR023298. ATPase_P-typ_TM_dom. IPR008250. ATPase_P-typ_transduc_dom_A. IPR001757. Cation_transp_P_typ_ATPase. IPR023214. HAD-like_dom. [Graphical view] |
| PANTHER | PTHR24093. PTHR24093. 1 hit. |
| Pfam | PF00689. Cation_ATPase_C. 1 hit. PF00690. Cation_ATPase_N. 1 hit. PF00122. E1-E2_ATPase. 1 hit. PF00702. Hydrolase. 1 hit. [Graphical view] |
| PRINTS | PR00119. CATATPASE. PR00120. HATPASE. |
| SMART | SM00831. Cation_ATPase_N. 1 hit. [Graphical view] |
| SUPFAM | SSF81660. ATPase_cation_domN. 1 hit. SSF56784. HAD-like_dom. 1 hit. |
| TIGRFAMs | TIGR01116. ATPase-IIA1_Ca. 1 hit. TIGR01494. ATPase_P-type. 2 hits. |
| PROSITE | PS00154. ATPASE_E1_E2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| BindingDB | P16615. |
| ChEMBL | CHEMBL3901. |
| ChiTaRS | ATP2A2. human. |
| GenomeRNAi | 488. |
| NextBio | 2031. |
| SOURCE | Search... |
Entry information
| Entry name | AT2A2_HUMAN | ||||||||
| Accession | Primary (citable) accession number: P16615 Secondary accession number(s): A6NDN7 Q86VJ2 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 12 Human chromosome 12: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
