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Protein

Non-structural protein NS-S

Gene

N

Organism
Maguari virus
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

  1. viral process Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Non-structural protein NS-S
Gene namesi
Name:N
OrganismiMaguari virus
Taxonomic identifieri11575 [NCBI]
Taxonomic lineageiVirusesssRNA negative-strand virusesBunyaviridaeOrthobunyavirus
Virus hostiEquus caballus (Horse) [TaxID: 9796]

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 101101Non-structural protein NS-SPRO_0000221977Add
BLAST

Family & Domainsi

Sequence similaritiesi

Family and domain databases

InterProiIPR000797. Bunya_NSs.
[Graphical view]
PfamiPF01104. Bunya_NS-S. 1 hit.
[Graphical view]
PIRSFiPIRSF003954. NS-S_OrthobunV. 1 hit.

Sequences (2)i

Sequence statusi: Complete.

This entry describes 2 isoformsi produced by alternative initiation. AlignAdd to basket

Isoform NSS (identifier: P16605-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MMSLLTPAVL LTQRLHTLTL SVSTPLGLVM TTFESSTLKD ARLKLVSQKE
60 70 80 90 100
VSGRLRLTLG AGRLLYLIQI FLATGTVQFQ TMVLPSTDSV DSLPGTYLRK

F

Note: Produced by alternative initiation in the N gene, but encoded on another frame.

Length:101
Mass (Da):11,099
Last modified:August 1, 1990 - v1
Checksum:iB1160497B04252DD
GO
Isoform N (identifier: P16606-1) [UniParc]FASTAAdd to basket

The sequence of this isoform can be found in the external entry P16606.
Isoforms of the same protein are often annotated in two different entries if their sequences differ significantly.
Length:233
Mass (Da):26,428
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M28380 Genomic RNA. Translation: AAA57148.1.
D13783 Genomic RNA. Translation: BAA02927.1.
PIRiB33076. MNVUMB.

Keywords - Coding sequence diversityi

Alternative initiation

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M28380 Genomic RNA. Translation: AAA57148.1.
D13783 Genomic RNA. Translation: BAA02927.1.
PIRiB33076. MNVUMB.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

InterProiIPR000797. Bunya_NSs.
[Graphical view]
PfamiPF01104. Bunya_NS-S. 1 hit.
[Graphical view]
PIRSFiPIRSF003954. NS-S_OrthobunV. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Nucleotide sequence and expression of the small (S) RNA segment of Maguari bunyavirus."
    Elliott R.M., McGregor A.
    Virology 171:516-524(1989) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Entry informationi

Entry nameiNSS_MAGV
AccessioniPrimary (citable) accession number: P16605
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 1, 1990
Last sequence update: August 1, 1990
Last modified: October 1, 2014
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.